FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ANASK (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter sp. (strain K) GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 83/234 (35.47%), Postives = 125/234 (53.42%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQ E++ K+G+ VP+G + E + A + + VK+QI AGGRG G GGV + + +E A MLG +L T QTGP G+ V KVY+ E + E+Y + LDR+ ++ +GG IE++A K+P+ I++ I G+ A ++ GL + LY + +D +L EINPL T G +++A DAK+NFDDNA +R Sbjct: 1 MKIHEYQAKEILRKFGVAVPRGYLAVTPLEAEGAARQLGGGIS--AVKAQIHAGGRGKG-------GGVKLARSPDEARQHAEAMLGMMLKTPQTGPDGQEVRKVYVEEGCRIARELYLGMTLDREIGRLAVMASVEGGVDIEEVAAKHPDKILREWISPLTGLMPFQARRLAFGLGLTGDSVTAFVRFATGLYNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ANAD2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=sucC PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.556e-32 Identity = 83/234 (35.47%), Postives = 125/234 (53.42%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + IHEYQ E++ K+G+ VP+G + E + A + + VK+QI AGGRG G GGV + + +E A MLG +L T QTGP G+ V KVY+ E + E+Y + LDR+ ++ +GG IE++A K+P+ I++ I G+ A ++ GL + LY + +D +L EINPL T G +++A DAK+NFDDNA +R Sbjct: 1 MKIHEYQAKEILRKFGVAVPRGYLAVTPLEAEGAARQLGGGIS--AVKAQIHAGGRGKG-------GGVKLARSPDEARQHAEAMLGMMLKTPQTGPDGQEVRKVYVEEGCRIARELYLGMTLDREIGRLAVMASVEGGVDIEEVAAKHPDKILREWISPLTGLMPFQARRLAFGLGLTGDSVTAFVRFATGLYNAYVATDASLAEINPLVITVGGEVLALDAKMNFDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_COXBN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii (strain Dugway 5J108-111) GN=sucC PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32 Identity = 85/236 (36.02%), Postives = 127/236 (53.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ L+ KY I VP V + D A + D VVK+Q+ AGGRG GGV +VK KEE++ +LG LVT QT +G+ V+++ + + + E+Y ++DR + + + ++GG IE +AEK P I+KV +D G+ ++ GL + + V LY+LF E D +LLEINPL T +L+ DAK+N DD+A +RQ Sbjct: 1 MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDR--WVVKAQVHAGGRGKA-------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQ 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_COXB1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii (strain CbuK_Q154) GN=sucC PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.868e-32 Identity = 85/236 (36.02%), Postives = 127/236 (53.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA-PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ L+ KY I VP V + D A + D VVK+Q+ AGGRG GGV +VK KEE++ +LG LVT QT +G+ V+++ + + + E+Y ++DR + + + ++GG IE +AEK P I+KV +D G+ ++ GL + + V LY+LF E D +LLEINPL T +L+ DAK+N DD+A +RQ Sbjct: 1 MNLHEYQSKHLLKKYNIPVPASEVVFNPDAAVDAAAKIGGDR--WVVKAQVHAGGRGKA-------GGVRLVKNKEELKSAVKALLGTRLVTYQTDERGQPVNQILVEQTSDIARELYLGAVIDRASQRIVFMASTEGGVEIEKVAEKSPEKILKVTVDPAIGLQPFQCRQLFFGLGLQDLKQMRSFTDIVMGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQ 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PHOPR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Photobacterium profundum GN=sucC PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.683e-31 Identity = 88/241 (36.51%), Postives = 132/241 (54.77%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A+YG+ VP+G A + E +A + D K VVK Q+ AGGRG GGV I K+ V++ A K LG+ LVT QT +G+ V+K+ + E ++ NE+Y ++DR T + + ++GG IE +AE+ P +I + ID G + LA K+ D I+Q K++ +F + D LLEINPL T+ L+ D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKQLFAEYGLPVPEGFACDTAQEAFEAAGRISTDKK--VVKCQVHAGGRGKA-------GGVEIHDTKDGVKEFAQKWLGKNLVTFQTDAKGQPVTKILVEEASNIANELYLGAVVDRATRRIVFMASTEGGVDIEKIAEETPELIHQAAIDPLVGPQPYQGRE----LAFKLGLVGDQIKQFVKIFLGLGNMFAQYDLALLEINPLVVTAEGNLLCLDGKINIDSNAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAEPS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=sucC PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.683e-31 Identity = 90/239 (37.66%), Postives = 131/239 (54.81%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVK----KLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQG ++ AKY + V +G+A + DE +A + + D +K Q+ AGGRG GGV +V+ E EV + A K LG+ LVT QT G+ V+ +Y+ E + E+Y ++DR + + + S GG +IE++A K P ++ KV ID G A LA K+ D I+Q +L KLF E D +LLEINPL T+ L+ DAK+ D NA +RQ Sbjct: 1 MNLHEYQGKQIFAKYKLPVSQGIACKTADEAVEAIKQLKGD--AWAIKCQVHAGGRGKA-------GGVKLVRNEAEVREFADKWLGKRLVTFQTDANGQPVNTLYVEETAGIARELYLGAVIDRSSQKVVFMASSAGGMNIEEVAAKTPELLHKVAIDPLVG----GMAYQGRELAFKLGLTGDQIKQFSFIFTQLAKLFVEKDLSLLEINPLVVTTEGNLLCLDAKMVVDGNALYRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_MARAV (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=sucC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.198e-31 Identity = 91/241 (37.76%), Postives = 129/241 (53.53%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG+A + E A ++ D VVK+Q+ AGGRG GGV +VK KEE+ + A K LG+ LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +AE+ P I+K ID G + LA K+ I Q K++ KLF E D L+EINPL T L DAK+ D NA +RQK+ Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGIACDTPKEAVAAADEIGGDG--WVVKAQVHAGGRGKA-------GGVKLVKSKEEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYLGAVVDRGSRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRE----LAFKLGLEGKQIGQFTKIFLGLAKLFEECDLALVEINPLVITPAGDLHCLDAKVGVDGNALYRQKK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CAMC5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Campylobacter curvus (strain 525.92) GN=sucC PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.198e-31 Identity = 79/236 (33.47%), Postives = 130/236 (55.08%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +NIHE+Q E++ +YG+NV KG ++++ + D+ + + +K+QI AGGRGL GGV I +E+ A K+LG L+T QT G +V K+Y+ E L+ E+Y ++ DR + +I GG SIE+ A++ P++I + ID G+ ++++ L + ++ LYK++ D L+EINPL T + A DAK++FDD+A FR + Sbjct: 1 MNIHEFQAKEILKRYGVNVAKGAVAENLEQASEILNDL--EGEIFALKAQIHAGGRGLA-------GGVKIASSREQAIQFASKLLGMTLITPQTPKNGILVRKIYIEEGLNFKQEIYLSLAFDRNSEKISLIVSKDGGVSIEETAKQNPHLIKTISIDPQIGLCGFHTKELINFLQIDKILWSKLDTLLQNLYKIYIFKDANLIEINPLVLTQDDEFYALDAKMSFDDSALFRHE 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PASMU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pasteurella multocida GN=sucC PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.898e-31 Identity = 90/243 (37.04%), Postives = 132/243 (54.32%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDE----VKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ ++ A+Y + V KG A S DE +KK DV+ V K Q+ AGGRG GGV +V+ E EV A + LGQ LVT QT G+ V+ +Y+ E S+ E+Y +LDR + + + ++GG +IE++AEK P+++ K+ ID G + LA K+ + D I+Q ++ K+F E D LLE+NPL T L+ DAK+ D NA +RQ Sbjct: 1 MNLHEYQAKQIFAEYQLPVGKGYACKSADEAADAIKKLNGDVW------VAKCQVHAGGRGKA-------GGVKLVRNEAEVRAFADQWLGQRLVTFQTDVNGQPVNTLYVEEGSSIARELYLGAVLDRASQRVVFMVSTEGGVNIEEVAEKTPHLLHKMAIDPLTGGMPYQGRE----LAFKLGLKGDQIKQFAHIFVQMAKMFVEKDLALLEVNPLVVTKEGNLLCLDAKIVVDSNALYRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HAHCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hahella chejuensis (strain KCTC 2396) GN=sucC PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.898e-31 Identity = 89/241 (36.93%), Postives = 127/241 (52.70%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A YG+ V KG A S E A + + VVK+Q+ AGGRG GGV +V KEE++ A K LG LVT QT +G+ V+K+ + + E+Y ++DR T + + ++GG IE +AE+ P I+K ID G A + LA + +D ++Q K++ KLF + D LLE+NPL T G L DAK+ D NA +RQ R Sbjct: 1 MNLHEYQAKQLFADYGLPVSKGFACESAQEAMSAADSI--GGSQWVVKAQVHAGGRGKA-------GGVKLVSSKEEIKAFAEKWLGHNLVTYQTDEKGQPVNKILVESCTDIDQELYLGAVMDRGTRRIVFMASTEGGVEIEKVAEETPEKILKAVIDPLVGAQPYQARE----LAFALGLNSDQVKQFTKIFLGLAKLFQDLDLALLEVNPLVITKGGNLHCLDAKVVVDGNALYRQPR 228 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |