FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PROMH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Proteus mirabilis (strain HI4320) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 80/239 (33.47%), Postives = 122/239 (51.05%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L ++YG+ P G A ++ E ++A + VVK Q+ AGGRG GGV +V KEE+ A + LG+ LVT QT G+ V+++ + + E+Y ++DR T + + ++GG IE +AE+ P +I + ID G + LA K+ + + Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFSRYGLPAPAGFACSTPREAEEAASKI--GQGPWVVKCQVHAGGRGKA-------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDANGQPVTQILVEAATDIAKELYLGAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHRAIIDPLTGPMPYQGRE----LAFKLGLKGKQVSQFAKIFMGLATIFLERDLALIEINPLVITKDDDLICLDGKLGVDSNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PHOLL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Photorhabdus luminescens subsp. laumondii GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 84/239 (35.15%), Postives = 121/239 (50.63%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KEE+ A + LG+ LVT QT QG+ V ++ + + E+Y ++DR T + + ++GG IE +AE+ P +I K ID G + LA K+ + Q K++ LF E D L+EINPL T+ L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPAGYACTTPREAEEAASKI--GSGPWVVKCQVHAGGRGKA-------GGVKVVNSKEEIRAFAEQWLGKRLVTYQTDAQGQPVRQILVEAATDIAKELYLGAVVDRGTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLIGPMSYQGRE----LAFKLGLTGKQVSQFTKIFLGLANLFLERDLALVEINPLVITTQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ENTS8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 83/239 (34.73%), Postives = 124/239 (51.88%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+ G+ P G A ++ E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV ID G + LA K+ ++Q K++ +F E D L+EINPL TS L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARSGLPTPVGYACSTPREAEEAASKI--GSGPWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIAKELYLGAVVDRGSRRVVFMASTEGGVEIEKVAEETPHLIHKVAIDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKVFMGLANIFLERDLALIEINPLVITSQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACTSZ (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 83/238 (34.87%), Postives = 126/238 (52.94%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVK----KLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ ++ A+Y + V KG +V++ KA + + D + V K Q+ AGGRG GGV +V E EV + LG+ LVT QT QG+ V+ +YL ++ E+Y +++DR + + ++GG +IE++AEK P+++ KV ID F G + LA K+ I Q +L K+F E D +L+EINPL L DAK+ D NA +R Sbjct: 1 MNLHEYQSKQIFAQYDLPVSKGYPCETVEQALKAIEKLGGD--QWVAKCQVYAGGRGKA-------GGVKVVSSEAEVRSFFERFLGKRLVTLQTDAQGQPVNTIYLEACAAVKKELYVGMVIDRANRRIVFMASTEGGVNIEEVAEKTPHLLHKVAIDPFMGAQPFQGRE----LACKLGLTGKQIHQFAHIFCRLSKMFSEKDLSLVEINPLVILQNDDLHCLDAKIVVDGNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBY (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acinetobacter baumannii (strain AYE) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+ +YG+ V +G+ + DE A + + K V+K+Q+ AGGRG GGV + K KE+V + A ++G LVT QT G+ V+ + + E + V E+Y ++DR + + ++GG IE +AE+ P I+KV +D G+ A +V L K ++ + Y+ F E+D L EINPL+ +++ DAK+ D NA +R Sbjct: 1 MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQL--GGKFAVMKAQVHAGGRGKA-------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBT (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=sucC PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+ +YG+ V +G+ + DE A + + K V+K+Q+ AGGRG GGV + K KE+V + A ++G LVT QT G+ V+ + + E + V E+Y ++DR + + ++GG IE +AE+ P I+KV +D G+ A +V L K ++ + Y+ F E+D L EINPL+ +++ DAK+ D NA +R Sbjct: 1 MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQL--GGKFAVMKAQVHAGGRGKA-------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIBC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acinetobacter baumannii (strain ACICU) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+ +YG+ V +G+ + DE A + + K V+K+Q+ AGGRG GGV + K KE+V + A ++G LVT QT G+ V+ + + E + V E+Y ++DR + + ++GG IE +AE+ P I+KV +D G+ A +V L K ++ + Y+ F E+D L EINPL+ +++ DAK+ D NA +R Sbjct: 1 MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQL--GGKFAVMKAQVHAGGRGKA-------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIB5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acinetobacter baumannii (strain AB0057) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+ +YG+ V +G+ + DE A + + K V+K+Q+ AGGRG GGV + K KE+V + A ++G LVT QT G+ V+ + + E + V E+Y ++DR + + ++GG IE +AE+ P I+KV +D G+ A +V L K ++ + Y+ F E+D L EINPL+ +++ DAK+ D NA +R Sbjct: 1 MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQL--GGKFAVMKAQVHAGGRGKA-------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIB3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acinetobacter baumannii (strain AB307-0294) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 77/235 (32.77%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ L+ +YG+ V +G+ + DE A + + K V+K+Q+ AGGRG GGV + K KE+V + A ++G LVT QT G+ V+ + + E + V E+Y ++DR + + ++GG IE +AE+ P I+KV +D G+ A +V L K ++ + Y+ F E+D L EINPL+ +++ DAK+ D NA +R Sbjct: 1 MNLHEYQAKALLKEYGMPVQEGILATNADEAVAAFEQL--GGKFAVMKAQVHAGGRGKA-------GGVKVAKSKEDVIEFANNIIGTRLVTYQTDANGQPVNSIIVAEDVYPVERELYLGAVVDRSSRRITFMASTEGGVEIEKVAEETPEKIIKVEVDPLVGLQPFQAREVAFALGLKDKQIGQFVKIMTAAYQAFVENDFALFEINPLSVRENGEILCVDAKVGIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_KLEP7 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=sucC PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.881e-28 Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I K+ ID G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAEHWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKIAIDPLAGPMPYQGRE----LAFKLGLEGKQVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |