FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALG2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=sucC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALEP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salmonella enteritidis PT4 (strain P125109) GN=sucC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALDC (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salmonella dublin (strain CT_02021853) GN=sucC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIDKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALCH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salmonella choleraesuis GN=sucC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALA4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salmonella agona (strain SL483) GN=sucC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 82/239 (34.31%), Postives = 123/239 (51.46%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +VK KEE+ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVKSKEEIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSYA2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=sucC PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.275e-28 Identity = 81/235 (34.47%), Postives = 124/235 (52.77%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ EL+ YG+ + +GL S DE A D V+K+Q+ AGGRG GGV +VK +EE + + +++G LVT QT G+ V+ V + E + V E+Y ++DR + + ++GG IE +AE+ P I KV ID G+ A +V L + + ++ + Y+ F E+D LLEINPLA ++V D K++ D NA +R Sbjct: 1 MNLHEYQAKELLKSYGLPIQEGLIAYSGDEAAAAFDKTPTDIA--VIKAQVHAGGRGKA-------GGVKLVKTREEAKQVTDELIGTNLVTYQTDAAGQPVNFVLVAEDMYPVQTELYLGAVVDRSSRRVTFMASTEGGVEIEKVAEETPEKIFKVSIDPLVGLLPFQAREVAFKLGLEGKQISQFVKLMTGAYQAFVENDIDLLEINPLAVRENGEIVCVDGKISIDSNALYR 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XANOR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 85/237 (35.86%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N HEYQ +L+A+YGI VP G A+ DE + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT ++ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ L + LYKLF E D L+EINPLA L A D K + DDNAAFRQK+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLNAKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQ 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XANOP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 85/237 (35.86%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N HEYQ +L+A+YGI VP G A+ DE + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT ++ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ L + LYKLF E D L+EINPLA L A D K + DDNAAFRQK+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLNAKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQ 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XANOM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 85/237 (35.86%), Postives = 116/237 (48.95%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N HEYQ +L+A+YGI VP G A+ DE + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT ++ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ L + LYKLF E D L+EINPLA L A D K + DDNAAFRQK+ Sbjct: 1 MNFHEYQSKQLLAEYGIPVPSGKVAATPDEAVDVATSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAAAKMLGTKMSTYQTAGVELPINLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHALNVDFVEGVQGYHGRDFGFKLGLNAKQAGQFASIMVNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQKQ 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSYWF (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Psychrobacter sp. (strain PRwf-1) GN=sucC PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.971e-28 Identity = 79/238 (33.19%), Postives = 125/238 (52.52%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVN-EMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L+ YG+ + KG+ + +E +A D V+K+Q+ AGGRG GGV +VK +EE +++A ++G LVT QT +G+ V+ V + E + V E+Y ++DR T + ++GG IE +AE+ P I + +D G+ A +V L + N ++ + YK F E+D ++EINPLA +L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKLLLESYGLPIQKGIIAYNGEEAAEAFDKTPTD--VAVIKAQVHAGGRGKA-------GGVKLVKTREEAKEVAESLIGTNLVTYQTDAEGQPVNFVLVAEDMYPVKTELYLGAVVDRATRRVTFMASTEGGVEIEKVAEETPEKIFSITVDPLVGLLPFQAREVGFKLGLEGKQINQFVKLMTGAYKAFVENDFDMIEINPLAVRENGELACVDGKIGVDSNALFRQPK 229 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |