FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XANCB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain B100) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 83/236 (35.17%), Postives = 116/236 (49.15%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HEYQ +L+A+YGI VP G ++ DE + + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT V+ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ L + LY+LF + D L+EINPLA L A D K + DDNAAFRQK Sbjct: 1 MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYLSILVDRGTKTVTYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLNAKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEU5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas stutzeri (strain A1501) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 82/237 (34.60%), Postives = 121/237 (51.05%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV S E +A + + VVK+Q+ AGGRG GGV +V+ K+E A + L + LVT QT G+ VSK+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G A ++ L K + L +LF + D LLE+NPL + L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGYAVDSPKEAAEACDKI--GGTQWVVKAQVHAGGRGKA-------GGVKLVRSKDEARAFAQQWLDKRLVTYQTDANGQPVSKILVEACTDIDKELYLGAVVDRASRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPFQARELAFQLGLKGDQVKQFVHIFVGLAQLFQDYDLALLEVNPLVIKTDGNLHCLDAKINIDSNAIYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSEU2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. syringae (strain B728a) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 84/243 (34.57%), Postives = 127/243 (52.26%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + + +A + E VVK+Q+ AGGRG GGV +V+ KE+ A + LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G A+ G LA ++ + Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKI--GGTEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVG------AQPFQGRDLAFQLGLEGKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PSESM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pseudomonas syringae pv. tomato GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 84/243 (34.57%), Postives = 127/243 (52.26%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDG--LAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQG +L A+YG+ V KG AV + + +A + E VVK+Q+ AGGRG GGV +V+ KE+ A + LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +A P I+K ID G A+ G LA ++ + Q K++ KLF + D LLE+NPL + L DAK+N D NA +RQ + Sbjct: 1 MNLHEYQGKQLFAEYGLPVSKGYAVDTPEAAAEACDKI--GGTEWVVKAQVHAGGRGKA-------GGVKLVRSKEDAAAFAQQWLGKRLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRSSRRIVFMASTEGGVDIEKIAHDTPEKILKATIDPLVG------AQPFQGRDLAFQLGLEGKQVTQFAKIFTGLAKLFQDHDLALLEVNPLVIKADGDLHCLDAKINIDANAMYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_MARMS (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Marinomonas sp. (strain MWYL1) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 84/241 (34.85%), Postives = 125/241 (51.87%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A+YG+ V G AV + + +A + + + VVK+Q+ AGGRG GGV +V EEV LG+ LVT QT G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + LA K+ I+Q K++ ++F + D LLEINPL T L D K+ D NA +RQK+ Sbjct: 1 MNLHEYQAKQLFAEYGLPVSTGYAVDTPEAAVEAAKKI--GGNKWVVKAQVHAGGRGKA-------GGVKLVDSYEEVAAFTQNWLGKNLVTYQTDANGQPVAKILVESCTDIANELYLGAVVDRSTRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLVGAQPYQARE----LAFKLGLNPTQIKQFTKVFLGLSQMFHDYDFALLEINPLVITDEGNLHCLDGKIGIDSNAVYRQKK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_DESK1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 73/233 (31.33%), Postives = 127/233 (54.51%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + ++EY+G E+ KYGI P+G+ SV++V KA +++ + +V+KSQ+L GGRGL G+K ++ EE A ++ + +G+ V K+ + E + + E+Y ++ +DR T + + GG IE+LA K+P+ I+++P+D F G + A + L + ++ +YK+ + D L+E NPLA T +L A DAK+ DDN+ +R Sbjct: 1 MKLYEYEGKEIARKYGIETPRGILATSVEDVDKAYREL--NTGTVVLKSQVLVGGRGLA---GGVKKASNL---EEALTKARELFSMSI-------KGERVEKILVEEAVCISRELYMSLTVDRATRKLVYLASGMGGVEIEELARKHPDKILRIPVDPFIGYSGYMARHALGFLGLQWDKLGQLDNIMRAMYKIMIDYDAELVEFNPLAYTCDGRLTALDAKIIIDDNSLYR 218
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_AERS4 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aeromonas salmonicida (strain A449) GN=sucC PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.475e-27 Identity = 83/241 (34.44%), Postives = 125/241 (51.87%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ +L A+YG+ V +G A A+ E +A + VVK Q+ AGGRG GGV + K K+E+ A LG+ LVT QT G+ V+K+ + + E+Y ++DR + + + ++GG IE +A + P +I K ID G A + LA K+ D I+Q K++ ++F + D LLEINPL T+ L D K+N D NA +RQ + Sbjct: 1 MNLHEYQAKKLFAEYGLPVSEGYACATPQEAAEAADKI--GGTTWVVKCQVHAGGRGKA-------GGVKLAKSKDEIRAFAQNWLGKNLVTYQTDANGQPVTKILVESCTDIAKELYLGAVVDRGSRRVVFMASTEGGVDIEKIAHETPELIHKAAIDPLVGPQAYQARE----LAFKLGLVGDQIKQFTKIFMGLGQMFLDCDFALLEINPLVITAQGNLHCLDGKINIDANALYRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XANCP (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris GN=sucC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.926e-27 Identity = 83/236 (35.17%), Postives = 116/236 (49.15%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HEYQ +L+A+YGI VP G ++ DE + + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT V+ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ L + LY+LF + D L+EINPLA L A D K + DDNAAFRQK Sbjct: 1 MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLNAKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_XANC8 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas campestris pv. campestris (strain 8004) GN=sucC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.926e-27 Identity = 83/236 (35.17%), Postives = 116/236 (49.15%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQK 733 +N HEYQ +L+A+YGI VP G ++ DE + + +VK+QI AGGRG GGV K ++V+ A KMLG + T QT V+ V + +V E+Y +I++DR T I S+GG IE +A + P +I + +D G+ L + LY+LF + D L+EINPLA L A D K + DDNAAFRQK Sbjct: 1 MNFHEYQSKQLLAEYGIPVPAGKVASTPDEAVEVANSL--GKGPWMVKAQIHAGGRGKA-------GGVKFCKTTDDVKAAADKMLGTKMSTYQTAGVELPVNLVLVTTAGEIVKELYLSILVDRGTKTITYIASSEGGVEIEQVAAETPELIHSLNVDFVEGVQGYHGRDFGFKLGLNAKQAGQFASIMVNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQK 227
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALAR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=sucC PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.926e-27 Identity = 80/239 (33.47%), Postives = 122/239 (51.05%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT G+ V+++ + + E+Y ++DR + + + ++GG IE +AE+ P++I KV +D G + LA K+ ++Q K++ +F E D L+EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAG--PWVVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAATDIGKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPHLIHKVALDPLTGPMPYQGRE----LAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGADGNALFRQ 226 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |