FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLAB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydophila abortus GN=sucC PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.632e-26 Identity = 71/237 (29.96%), Postives = 123/237 (51.90%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +++HEYQ +L+ Y I +P +SV+E + ++ + VVK Q+ AGGRG GGV + K EE+ ++L V+ QT + V KV + +++ E Y A+++DRK P I+ GG IE++A+KYP+ + + + F + + +++ + + ++ +K L + F ++D +LLEINPL T L+ DAK+ DDNA +R + Sbjct: 1 MHLHEYQAKDLLTSYAIPMPPYRVASSVEEGRHTLNELGINAG--VVKVQVHAGGRGKN-------GGVIVAKSPEEILAAVDQLLHMRFVSNQTSGEALPVEKVLITPLVNIAAEYYLAVIMDRKNRCPTIMLSKAGGVDIEEVAQKYPDQQLTISLTPFARLYNYQLRQMIKFMGWEGDTGKQGVQMIKNLVQCFYDNDASLLEINPLVRTQEGDLLVLDAKVTIDDNALYRHPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_NATPD (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=sucC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.744e-26 Identity = 73/235 (31.06%), Postives = 125/235 (53.19%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV-FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + +HEYQ + A GI VP+ ++VDE +A D+ +P + +K+Q+ GGRG GG+ +V+ +E + A ++LG L +G V +V + + +E+Y + +DR P+ + ++GG +IE++AE+ P+ IV+ ID G+ A K A ND + +LY+L+ + D T +E+NPL T +++AADA +N D++A FR Sbjct: 1 MKLHEYQAKGVFADAGIPVPESTLASTVDEAVEAADDIGYP----VAIKAQVQVGGRGKA-------GGIKLVENADEAREAADEILGMDL-------KGLHVDRVLVEAAVDFTDELYVGVTMDRAAGKPVAMVSTRGGVNIEEVAEEDPDAIVREHIDPAFGMHPFQARKAAFEAGVDRAVANDVASILTQLYELWADKDATEIEVNPLMVTDDDEVIAADAVMNIDEDALFR 217
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_EDWI9 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Edwardsiella ictaluri (strain 93-146) GN=sucC PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.744e-26 Identity = 80/241 (33.20%), Postives = 124/241 (51.45%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 +N+HEYQ +L A+YG+ P+G A ++ + ++A + VVK Q+ AGGRG GGV V+ KE + A + LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +A+K P++I +V +D G ++ GL+ K A + I L LF + D T+ EINPL T L+ D KL+ D NA FRQ L Sbjct: 1 MNLHEYQAKQLFAQYGLPTPEGYACSTPCQAEEAASKI--GSGPWVVKCQVHAGGRGKA-------GGVKCVESKEAIHAFAEQWLGKRLVTYQTDAHGQPVRQILVEGATEIARELYLGAVIDRSSRRVVFMASTEGGVEIEQVAQKTPHLIHRVALDPLTGPQPYQGRELAFKLGLSGKQAQQFGQI--FLGLATLFLQCDLTMAEINPLVITPQGDLLCLDGKLDVDSNALFRQPTLL 230
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SHEON (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella oneidensis GN=sucC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 80/237 (33.76%), Postives = 115/237 (48.52%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIV-KKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKR 736 +N+HEYQ L A+YG+ V +G A + E +A + VVK Q+ AGGRG GGV + KEE+ A LG+ LVT QT +G+ V+K+ + + NE+Y ++DR T + + ++GG IE +AE+ P +I K ID G A + L + L +F + D LLEINPL T+ L D K+ D NA FRQ + Sbjct: 1 MNLHEYQAKSLFAEYGLPVSEGFACDTAQEAVEAAGRI--GGNLWVVKCQVHAGGRGKA-------GGVKVTGDKEEIRAFAEYWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRATRRVVFMASTEGGVEIEKVAEETPELIHKAIIDPLTGPQPFQARDLGFKLGLNPTQMKQFTKIFMGLATMFVDHDFALLEINPLVITTEGNLHCLDGKIGIDGNALFRQPK 228
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLTB (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=sucC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 80/236 (33.90%), Postives = 123/236 (52.12%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA--PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++HEYQ +L+ Y + +P SV EV+ A Q K VVK+Q+ AGGRG GGV I E++ A K+L + QT V+KV + + + +E Y AI++DRK P+I+ GG IE++AEK P+ ++K+ + I ++ + +AD+ + I +++L + F E D +LLEINPL T LV DAK+ DDNA +R Sbjct: 1 MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVEAAIQA--EQWKAGVVKAQVHAGGRGKN-------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPVNKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWDQPIADQGNRI--IRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLT2 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=sucC PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 6.195e-26 Identity = 80/236 (33.90%), Postives = 123/236 (52.12%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA--PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++HEYQ +L+ Y + +P SV EV+ A Q K VVK+Q+ AGGRG GGV I E++ A K+L + QT V+KV + + + +E Y AI++DRK P+I+ GG IE++AEK P+ ++K+ + I ++ + +AD+ + I +++L + F E D +LLEINPL T LV DAK+ DDNA +R Sbjct: 1 MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVEAAIQA--EQWKAGVVKAQVHAGGRGKN-------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPVNKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWDQPIADQGNRI--IRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SERP5 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Serratia proteamaculans (strain 568) GN=sucC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26 Identity = 80/239 (33.47%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLY----KLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQ 730 +N+HEYQ +L A+YG+ P G A + E ++A + VVK Q+ AGGRG GGV +V KE++ A LG+ LVT QT G+ V ++ + + E+Y ++DR + + + ++GG IE +AE+ P +I K+ ID G + LA K+ + Q K++ LF E D ++EINPL T L+ D KL D NA FRQ Sbjct: 1 MNLHEYQAKQLFARYGMPAPTGYACTTPREAEEAASKI--GSGPWVVKCQVHAGGRGKA-------GGVKVVNSKEDIRAFAEAWLGKRLVTYQTDALGQPVHQILVEAATDIDKELYLGAVVDRASRRVVFMASTEGGVEIEKVAEETPELIHKMTIDPLAGPQPYQGRE----LAFKLGLTGKQVGQFAKIFMGLATLFLERDLAMVEINPLVVTKQGDLICLDGKLGADGNALFRQ 226
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_RENSM (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=sucC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26 Identity = 75/236 (31.78%), Postives = 122/236 (51.69%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++ EYQ ++ +G+ V G+ + +E K A + + VVK+Q+ GGRG GGV + K +E + AG +LG + +G V KV + + + E YF+++LDR + + +GG IE LA + P + ++ +D GI A ++VD G A V D IE +KKL+ +F + D TL+E+NPL +T +++A D K+ D NA FR Sbjct: 1 MDLFEYQARDMFEAHGVPVLAGIVANTAEEAKAAAEKI---GGVTVVKAQVKVGGRGKA-------GGVKVAKTADEAFEYAGNILGMDI-------KGHTVHKVMIAQGADIAEEYYFSVLLDRANRNYLAMCSVEGGVEIEVLAVERPEALARIAVDPAVGIDQAKAEEIVDAAGFAADVLD--GVIETIKKLWDVFQKEDATLVEVNPLVKTGDGRILALDGKVTLDANADFR 217
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLTR (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia trachomatis GN=sucC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26 Identity = 79/236 (33.47%), Postives = 123/236 (52.12%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA--PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++HEYQ +L+ Y + +P SV EV+ A Q K VVK+Q+ AGGRG GGV I E++ A K+L + QT ++KV + + + +E Y AI++DRK P+I+ GG IE++AEK P+ ++K+ + I ++ + +AD+ + I +++L + F E D +LLEINPL T LV DAK+ DDNA +R Sbjct: 1 MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQA--EQWKAGVVKAQVHAGGRGKN-------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWDQPIADQGNRI--IRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLTA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=sucC PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 8.091e-26 Identity = 79/236 (33.47%), Postives = 123/236 (52.12%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA--PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++HEYQ +L+ Y + +P SV EV+ A Q K VVK+Q+ AGGRG GGV I E++ A K+L + QT ++KV + + + +E Y AI++DRK P+I+ GG IE++AEK P+ ++K+ + I ++ + +AD+ + I +++L + F E D +LLEINPL T LV DAK+ DDNA +R Sbjct: 1 MHLHEYQAKDLLTAYQLPIPPYHVATSVPEVETAIQA--EQWKAGVVKAQVHAGGRGKN-------GGVVIAHSPEDLLAAADKLLHMQFSSNQTAGLSLPINKVLISPLVEIASEYYLAIVIDRKHRCPVIMLSKAGGVDIEEVAEKQPDQLLKMTLPSSGKIYGYQLRRIAKFMEWDQPIADQGNRI--IRQLLQCFYEKDASLLEINPLVLTKDGSLVILDAKMTIDDNALYR 225 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |