FC875593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_PYRIL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=sucC PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.245e-25 Identity = 66/236 (27.97%), Postives = 122/236 (51.69%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 + +HEY+ EL +YG+ +P G + DEV+K +++ +V+K+Q++ GRG GG+ I + EE +L+ KM G + +G +V K+Y+ + + + EMY ++++DR + + + GG IE++A+ P I KV +D G+ D ++ G P ++ +Y++ + D L+E NPLA + +++ DA++ DDNA F+ Sbjct: 1 MKLHEYEAKELFLRYGVKIPPGKLALTPDEVRKIAEEI---GTPVVLKAQVVVAGRGKA-------GGIKIAQTPEEAYELSKKMFGMNI-------KGLVVRKLYVTKYVEVEREMYLSLIIDRASRRYLFLASPIGGVDIEEIAKTSPEKIKKVYVDPSIGLRDYHIRSIISWLGFKPGSQQWQQTASVIQAMYRIMVDYDAELVETNPLALSKEGEVIPLDARVIVDDNALFK 219
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HALSA (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halobacterium salinarium GN=sucC PE=3 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 6.850e-25 Identity = 74/239 (30.96%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV-FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 + +HEYQ E+ A GI P+ SVDE + + +P + VK+Q+ GGRG GG+ + + E + A +LG L +G V +V + E + NE+Y + +DR P+++ +GG IE +AE+ P IV+ +D G+ A V + D + V+ +Y L+ +SD T +EINP+ TS + +VAADA + D++A FRQ + Sbjct: 1 MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYP----VAVKAQVHVGGRGKA-------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIEQDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQPAF 221
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_HALS3 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=sucC PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.850e-25 Identity = 74/239 (30.96%), Postives = 119/239 (49.79%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDV-FPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRY 739 + +HEYQ E+ A GI P+ SVDE + + +P + VK+Q+ GGRG GG+ + + E + A +LG L +G V +V + E + NE+Y + +DR P+++ +GG IE +AE+ P IV+ +D G+ A V + D + V+ +Y L+ +SD T +EINP+ TS + +VAADA + D++A FRQ + Sbjct: 1 MKLHEYQAKEVFADAGIPTPESALATSVDEAVEVADALDYP----VAVKAQVHVGGRGKA-------GGIKLAENTAEAREAAESILGMDL-------KGYTVDRVLVEEAVDFTNELYVGVTMDRSEGAPVVMVSERGGVDIESVAEEAPEDIVREHVDPSFGLQAYQARNAVYDAGIEQDVAGDVAKIVQGVYDLWADSDATEVEINPVMVTSERDVVAADAVMKLDEDALFRQPAF 221
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_ACIC1 (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=sucC PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 8.946e-25 Identity = 70/234 (29.91%), Postives = 120/234 (51.28%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGK-MLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++ EYQ EL A +G+ + G + D+ + + +VVK+Q+ GGRG GGV + + A + +LG + +G V +V + + + +E Y A ++DR + +G ++GG IE +A + P IV+VPID G+ AA++ D + A R++A+ ++ L++ F D +L+E+NPL T +L+A D K+ DDNA FR Sbjct: 1 MDLFEYQAKELFAAHGVPITPGEVAENPDQAADIARRL---GGRVVVKAQVKTGGRGKA-------GGVKLADDADAAAAAAEAILGMEI-------RGHRVHRVLVTTAVDIAHEYYVAFLVDRSRRSFLAMGSAEGGVEIEQVAAENPQAIVRVPIDATEGVDATLAARIADDIGFPAAVRDEAVRILRGLWEAFQAEDASLVEVNPLVRTLDDRLIALDGKVTLDDNADFR 217
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_THETH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Thermus thermophilus GN=sucC PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.168e-24 Identity = 75/234 (32.05%), Postives = 121/234 (51.71%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +N+HEYQ E++A+YG+ VP G + +E K+ ++ K +V+K+Q+ GGRG GGV + +E + A +LG + +G V KV + E + + E Y ++LDR +++ +GG IE++A + P I K ID G +A ++V A + N + + LY+ + D ++ EINPL T+ +VAADAK+ DDNA FR Sbjct: 1 MNLHEYQAKEILARYGVPVPPGKVAYTPEEAKRIAEEF---GKRVVIKAQVHVGGRGKA-------GGVKLADTPQEAYEKAQAILGMNI-------KGLTVKKVLVAEAVDIAKEYYAGLILDRAKKRVVLMLSKEGGVDIEEVAAERPEAIHKFWIDPHKGFRPFEAREMVKR-AGLEGNLNKLAQVLVALYRAYEGVDASIAEINPLVVTTDGGIVAADAKIVLDDNALFR 216
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLPN (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia pneumoniae GN=sucC PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24 Identity = 73/238 (30.67%), Postives = 119/238 (50.00%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDE----VKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEE-VEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++HEYQ +L+A Y + +P V+S +E + K+ D VVK Q+ AGGRG GGV + K + K+LG + QT V KV + +++ E Y A+++DRK P+++ GG IE++A P I+ +P+ + I + + + + ++ +KKL K F E+D +LLEINPL T +L+ D+K+ DDNA +R Sbjct: 1 MHLHEYQAKDLLASYDVPIPPYWVVSSEEEGELLITKSGLD------SAVVKVQVHAGGRGK-------HGGVIVAKSSAGILQAVAKLLGMHFTSNQTADGFLPVEKVLISPLVAIQREYYVAVIMDRKHRCPVLMLSKAGGMDIEEVAHSSPEQILTLPLTSYGHIYSYQLRQATKFMEWEGEVMHQGVQLIKKLAKCFYENDVSLLEINPLVLTLEGELLVLDSKITIDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CHLMU (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Chlamydia muridarum GN=sucC PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.526e-24 Identity = 75/236 (31.78%), Postives = 122/236 (51.69%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKK-EEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLA--PKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++HEYQ +L+ Y + +P S+ E + A Q + VVK+Q+ AGGRG GGV + + E++ ++L + QT V+KV + + + E Y AI++DRK P+I+ GG IE++AEK P++++K+ + I + + VADR + I ++KL + F ++D +LLEINPL T L+ DAK+ DDNA +R Sbjct: 1 MHLHEYQAKDLLTSYQLPIPPYHVATSLSEAEVAIQA--EQWRSGVVKAQVHAGGRGKN-------GGVIVARSPEDLLAATDRLLHMQFSSNQTAGLSLPVNKVLISPLVEIALEYYIAIVIDRKHRCPVIMLSKSGGIDIEEIAEKQPDLLLKIALPSSGKIYAYQLRHIAKFMEWDKLVADRGNHI--IRKLLQCFYDNDASLLEINPLVLTKDGDLIILDAKITIDDNALYR 225
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_CORGL (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Corynebacterium glutamicum GN=sucC PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.993e-24 Identity = 71/236 (30.08%), Postives = 125/236 (52.97%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKE-EVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 +++ EYQ +L +G+ V KG+ ++ + +KA +++ VVK+Q+ GGRG GGV + + D A +LG + +G V++V + + + E YF+I+LDR + + +GG IE LA++ P + KV +D GI ++ A ++V G +VA++ I + K+++++ E + TL+E+NPL T ++A D K+ DDNA FR Sbjct: 1 MDLFEYQARDLFETHGVPVLKGIVASTPEAARKAAEEI---GGLTVVKAQVKVGGRGKA-------GGVRVAPTSAQAFDAADAILGMDI-------KGHTVNQVMVAQGADIAEEYYFSILLDRANRSYLAMCSVEGGMEIEILAKEKPEALAKVEVDPLTGIDEDKAREIVTAAGFETEVAEK--VIPVLIKIWQVYYEEEATLVEVNPLVLTDDGDVIALDGKITLDDNADFR 217
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_METTH (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Methanobacterium thermoautotrophicum GN=sucC PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.400e-24 Identity = 73/242 (30.17%), Postives = 125/242 (51.65%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVKKEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVDGLAPKVADRNDAIEQVK----KLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFRQKRYL 742 + +EY E+ GI+ P+G + +E ++ ++ D + VKSQ+L GGRG GG+ V ++ G +L + +G+ V KV + EK+ + E+Y + ++DR P+I+ ++GG IE+LA + P IV+ I+ + +A ++ A K+ ++ I V KLY+LF + D L EINPL SG ++AADAKL DD++ +R + ++ Sbjct: 1 MKFYEYSAKEIFRAEGISTPRGGVAETPEEAERIAAELGCD---VAVKSQVLTGGRGKA-------GGIRFASPSGVAEVTGDLLSSEV-------RGETVEKVLIEEKIPIDRELYVSAVIDRTAKMPLIMASAEGGVDIEELAARSPEKIVRYHINPLDEFLPYEAREI----ARKMGLESELIPSVGGVIWKLYQLFRKYDARLAEINPLV-ISGDSVIAADAKLEVDDDSIYRHREFM 220
BLAST of FC875593 vs. ExPASy Swiss-Prot
Match: SUCC_SALTO (Succinyl-CoA ligase [ADP-forming] subunit beta OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=sucC PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.440e-24 Identity = 77/236 (32.63%), Postives = 121/236 (51.27%), Query Frame = 2 Query: 29 LNIHEYQGAELMAKYGINVPKGLAVASVDEVKKATQDVFPDHKELVVKSQILAGGRGLGTFKSGLKGGVHIVK-KEEVEDLAGKMLGQILVTKQTGPQGKIVSKVYLCEKLSLVNEMYFAIMLDRKTAGPIIIGCSKGGTSIEDLAEKYPNMIVKVPIDVFNGITDEDAAKVVD--GLAPKVADRNDAIEQVKKLYKLFCESDCTLLEINPLAETSGKQLVAADAKLNFDDNAAFR 727 ++++EYQG +L ++G+ V G + +E + + + +VVK+Q+ GGRG GGV + + EE A +LG + +G V KV + + E YF+ +LDR + I GG IE +A + P +VK PID G+ A ++V G +VAD+ +E L+K F D TL+E+NPLA+T+ L+ DAK++ D+NAAFR Sbjct: 1 MDLYEYQGRDLFERHGLPVLAGGVATTPEEARAIAERL---GGRVVVKAQVKVGGRGKA-------GGVKLTEGAEETVARATDILGMDI-------KGHTVHKVMITVTADVAEEYYFSYLLDRANRTFLCIASVAGGMDIEQVAAETPEKVVKEPIDANTGVDVATARRIVTQAGFPAEVADQT--VEIAVDLWKAFVAEDATLVEVNPLAKTAEGGLLLLDAKVSLDENAAFR 217 The following BLAST results are available for this feature:
BLAST of FC875593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875593 ID=FC875593; Name=FC875593; organism=Citrus clementina; type=EST; length=754bpback to top |