FC875597

Overview
NameFC875597
Unique NameFC875597
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length690
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_CAEEL (Protein BUD31 homolog OS=Caenorhabditis elegans GN=C07A9.2 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.245e-51
Identity = 87/141 (61.70%), Postives = 110/141 (78.01%), Query Frame = 2
Query:  149 KVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            K+R  R   P+GW+LI PTL + EAKMREAE +PH+GKRK E  WPIF+I HQRS+Y++++YYK+ EIS+ELYEFCL   + D+ LIAKWKK GYE LCC++C+  RD NFGT C+CRVPK  L  E+ +ECVHCGC GC+
Sbjct:    6 KLRRVRKSPPEGWDLIEPTLEQFEAKMREAETEPHEGKRKTEINWPIFRIHHQRSRYVYDMYYKKAEISRELYEFCLTAKFADAALIAKWKKQGYENLCCVKCVNTRDSNFGTACICRVPKSKLDAERVIECVHCGCHGCS 146          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: CWF14_SCHPO (Cell cycle control protein cwf14 OS=Schizosaccharomyces pombe GN=cwf14 PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.067e-45
Identity = 87/147 (59.18%), Postives = 108/147 (73.47%), Query Frame = 2
Query:  143 MPKVRTNRTKYP-DGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCASGD 577
            MP++RT+RTK P DG++ I PTL E + +MR+ EN    G  K E L PIF++ HQRS+YI++LYYKR  IS ELY + L Q Y D NLIAKWKKPGYE+LCCLRCIQ  +  FG+TC+CRVPK  L +++ V C HCGC GCAS D
Sbjct:    1 MPRLRTSRTKRPPDGFDEIEPTLIEFQDRMRQIENTMGKGT-KTEMLAPIFQLHHQRSRYIYDLYYKREAISTELYNWLLKQNYADGNLIAKWKKPGYEKLCCLRCIQTAESKFGSTCICRVPKSKLDKDQRVRCTHCGCNGCASCD 146          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_YEAST (Bud site selection protein 31 OS=Saccharomyces cerevisiae GN=BUD31 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.428e-39
Identity = 77/157 (49.04%), Postives = 106/157 (67.52%), Query Frame = 2
Query:  143 MPKVRTNRTK-YPDGWELIAPTLREMEAKMREAENDPHD--GKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPKHLREEK---------HVECVHCGCKGCASGD 577
            MP+++T R+K  PDG+E I PTL + E ++R+A+ D       +  E LW I ++ HQRS+YI+ LYYKR  ISK+LY++ + + Y D  LIAKW+K GYE+LCCLRCIQ  + N G+TC+CRVP+   EE+           +CVHCGC+GCAS D
Sbjct:    1 MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLWEIMQLHHQRSRYIYTLYYKRKAISKDLYDWLIKEKYADKLLIAKWRKTGYEKLCCLRCIQKNETNNGSTCICRVPRAQLEEEARKKGTQVSFHQCVHCGCRGCASTD 157          
BLAST of FC875597 vs. ExPASy Swiss-Prot
Match: BUD31_MOUSE (Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32
Identity = 68/143 (47.55%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  143 MPKVRTNRTKYPDGWELIAPTLREMEAKMREAENDPHDGKRKCETLWPIFKIAHQRSQYIFELYYKRNEISKELYEFCLDQGYGDSNLIAKWKKPGYERLCCLRCIQPRDHNFGTTCVCRVPK-HLREEKHVECVHCGCKGCA 568
            MPKV+ +R   PDGWELI PTL E++ KMRE                                         ELYE+C+ +GY D NLIAKWKK GYE LCCLRCIQ RD NFGT C+CRVPK  L   + +EC HCGC+GC+
Sbjct:    1 MPKVKRSRKAPPDGWELIEPTLDELDQKMRE-----------------------------------------ELYEYCIKEGYADKNLIAKWKKQGYENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCS 102          
The following BLAST results are available for this feature:
BLAST of FC875597 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
BUD31_CAEEL1.245e-5161.70Protein BUD31 homolog OS=Caenorhabditis elegans GN... [more]
CWF14_SCHPO5.067e-4559.18Cell cycle control protein cwf14 OS=Schizosaccharo... [more]
BUD31_YEAST1.428e-3949.04Bud site selection protein 31 OS=Saccharomyces cer... [more]
BUD31_MOUSE4.919e-3247.55Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31405F11EF CTVClemen1 Citrus clementina cDNA clone C31405F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875597 ID=FC875597; Name=FC875597; organism=Citrus clementina; type=EST; length=690bp
GGCAGCTCATTCTTCACATCGACACTAGCAAGAAGCAAAAGGGCAAATCG
AGCAACAAATCGGTTGGAGGAGGCTCTTGAAACTCTGTGCCTTTTAGCCT
GCAGATTCAGTCGGTTGATTTGATCAAGCTACAGGTTGCAAAATGCCTAA
AGTGAGGACAAACCGTACCAAGTATCCAGATGGGTGGGAGTTGATTGCGC
CTACGCTTCGTGAGATGGAGGCTAAGATGAGAGAAGCTGAAAATGATCCA
CATGATGGCAAGAGAAAGTGTGAAACACTGTGGCCCATCTTCAAAATTGC
GCATCAGAGGAGCCAGTACATATTTGAGCTTTATTACAAAAGGAATGAGA
TTTCCAAGGAATTGTACGAGTTCTGCTTGGATCAAGGATATGGTGACAGC
AACTTAATCGCTAAGTGGAAAAAGCCCGGATATGAACGACTCTGCTGCCT
ACGATGCATACAGCCAAGGGATCACAACTTTGGCACAACATGTGTGTGCA
GAGTTCCTAAGCACCTGAGGGAAGAGAAACATGTTGAGTGTGTGCATTGT
GGCTGTAAGGGCTGCGCAAGTGGGGATTAATTTGAGTACTTTGTCTAGCT
TTCTTTTTTGCATTCGATGTAGCTTAACTCTTGGAGGACTGATAGTATCG
ACAATCAGTTGAGCAAAAAAAAAAAAAAAAAAAAAAAAAA
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