FC875601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: GBLP_ARATH (Guanine nucleotide-binding protein subunit beta-like protein OS=Arabidopsis thaliana GN=ARCA PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.716e-11 Identity = 52/183 (28.42%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 134 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS---SSKKFVL---SVAWSPDGRRIACGSMDGTISVFDVTR 664 H + V V + P T +++ S D+TVK+W + +L T GH V +VA P G + AS D V ++D+ + +LEA+ S + + F P L A +K+WD + +++ L + + D S ++K+ V+ S+ WS DG + G DG I V+ + R Sbjct: 149 HRDWVSCVRFSP--NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPNRYWLCAA--TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 326
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: GBLP_CHLRE (Guanine nucleotide-binding protein subunit beta-like protein OS=Chlamydomonas reinhardtii GN=GBLP PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 52/175 (29.71%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 134 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 658 H E V V + P T T P ++++G D+ VK+W + +L+ GH V +V P G + AS D ++D+ + +L+A + + F P L A +S+K+WD + +++ L RPE T K + + +S+AWS DG + G DG I V+ V Sbjct: 149 HTEWVSCVRFSPMT-TNP-IIVSGGWDKMVKVWNLTNCKLKNNLVGHHGYVNTVTVSPDGSLCASGGKDGIAMLWDLAEGKRLYSLDAG-DVIHCLCFSPNRYWLCAA--TQSSIKIWDLESKSIVDDL---RPE-FNITSKKAQVPYCVSLAWSADGSTLYSGYTDGQIRVWAV 314
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 56/181 (30.94%), Postives = 75/181 (41.44%), Query Frame = 2 Query: 134 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRANSC 676 H VW V P + +GS D T +LW D R GH V V HP+ A+ S D VR++ S+ V + F P G LA A G +KLWD A+ L L TD + S+A+SPD IA SMD ++ V+D+ R+ C Sbjct: 383 HAYPVWDVDISPFS----LYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASA-GEDQRLKLWDLASGTLFKELR-------GHTDS------ITSLAFSPDSGLIASASMDNSVRVWDI-RSTCC 544
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: PRP4_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=EMB2776 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 54/183 (29.51%), Postives = 79/183 (43.17%), Query Frame = 2 Query: 134 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRANSCII 682 H+E V + P + L T S D T KLW+ D L+ T GH + VA HPSG + S D R++D++T A + E V+ + F G LA + G + ++WD T I +KP V SV +SP+G +A G D ++D+ S I Sbjct: 297 HKERATDVVFSPVDDC----LATASADRTAKLWKTDGTLLQ-TFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDG-ALAASCGLDSLARVWDLRTGRSILVFQ----GHIKP---------VFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: NLE1_MOUSE (Notchless protein homolog 1 OS=Mus musculus GN=Nle1 PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 185 PALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 652 P L++GS D T+ LW P +D + TGH + V P I ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L TD V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKL-------------ATDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: GBLP_TOBAC (Guanine nucleotide-binding protein subunit beta-like protein OS=Nicotiana tabacum GN=ARCA PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 51/184 (27.72%), Postives = 91/184 (49.46%), Query Frame = 2 Query: 128 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP-RPEGLKPTDKSSSKK----FVLSVAWSPDGRRIACGSMDGTISVFDVTR 664 ++H + V V + P +P ++ +GS D TVK+W + +L T GH V + A P G + AS D + ++D+ + +LE S S + + F P L A +S+K+WD + +++ L + + E ++ ++S K + S++WS DG + G DG I V+ + R Sbjct: 147 DSHSDWVSCVRFSP-NNLQPTIV-SGSWDRTVKIWNLTNCKLRLTLAGHTGYVNTPAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-SGSIIHSLCFSPNRYWLCAA--TESSIKIWDLESKSIVDDLKVDLKQESEMSSEGTASGKNKVIYCTSLSWSADGSTLFSGYTDGLIRVWGIDR 325
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: GBLP_BRANA (Guanine nucleotide-binding protein subunit beta-like protein OS=Brassica napus GN=GB1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11 Identity = 52/183 (28.42%), Postives = 87/183 (47.54%), Query Frame = 2 Query: 134 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKS---SSKKFVL---SVAWSPDGRRIACGSMDGTISVFDVTR 664 H + V V + P T +++ S D+TVK+W + +L T GH V +VA P G + AS D V ++D+ + +LEA+ S + + F P L A +K+WD + ++ L + + +D S ++K+ V+ S+ WS DG + G DG I V+ + R Sbjct: 149 HRDWVSCVRFSP--NTLQPTIVSASCDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFTPNRYWLCAA--TEQGIKIWDLESKTVVEDLKVDLKAEAEKSDGSGTAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 326
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: WDR69_RAT (WD repeat-containing protein 69 OS=Rattus norvegicus GN=Wdr69 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 43/162 (26.54%), Postives = 76/162 (46.91%), Query Frame = 2 Query: 194 LLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRANSCI 679 + TGS D+T KLW + + T GH +V ++ +P + A+ S+D+ +++D+ + + TL +E+ + FD G + + G +V +WD +T + TL E + S +S D I GSMD T ++D T + C+ Sbjct: 150 IATGSFDKTCKLWSAETGKCYHTFRGHTAEIVCLSFNPQSTVVATGSMDTTAKLWDIQSGEEVVTLTGHLAEIISLSFDTSGDRI-ITGSFDHTVVVWDASTGRKVHTLIGHCAE-------------ISSALFSWDCSLILTGSMDKTCMLWDAT-SGKCV 296 HSP 2 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 49/167 (29.34%), Postives = 77/167 (46.11%), Query Frame = 2 Query: 188 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRANSCIIWK 688 +L+LTGS+D+T LW + T TGH ++ +G + A+AS D RV++ T I LE E+ ++ F+P+G L + G + ++WD T + L EG TD+ + S A++ G + GS D NSC IW+ Sbjct: 274 SLILTGSMDKTCMLWDATSGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARVYNATTRKCITKLEGHEGEISKISFNPQGNRL-LTGSSDKTARIWDVQTGQCLQVL-----EG--HTDE------IFSCAFNYKGNIVITGSKD-----------NSCRIWR 415
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: NLE1_BOVIN (Notchless protein homolog 1 OS=Bos taurus GN=NLE1 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 46/157 (29.30%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 185 PALLLTGSLDETVKLWRP-DDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 652 P L++GS D T+ LW P +D + TGH + V P + ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L TD V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKL-------------STDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: GBLP_NICPL (Guanine nucleotide-binding protein subunit beta-like protein OS=Nicotiana plumbaginifolia PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.823e-11 Identity = 51/184 (27.72%), Postives = 88/184 (47.83%), Query Frame = 2 Query: 128 NAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIP-RPEGLKPTDKSSSKK----FVLSVAWSPDGRRIACGSMDGTISVFDVTR 664 ++H + V V + P +P ++ +GS D TVK+W + +L T GH V + A P G + AS D + ++D+ + +LE S S + + F P L A +S+K+WD + ++ L + + E + ++S K + S+ WS DG + G DG I V+ + R Sbjct: 147 DSHSDWVSCVRFSP-NNLQPTIV-SGSWDRTVKIWNLTNCKLRATLAGHTGYVNTTAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLE-SGSIIHSLCFSPNRYWLCAA--TESSIKIWDLESKTIVDDLKVDLKQESEMSAEGTASGKNKVIYCTSLGWSADGSTLFSGYTDGLIRVWGIGR 325 The following BLAST results are available for this feature:
BLAST of FC875601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875601 ID=FC875601; Name=FC875601; organism=Citrus clementina; type=EST; length=705bpback to top |