FC875601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: SWD3_SCHPO (Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.993e-11 Identity = 52/175 (29.71%), Postives = 80/175 (45.71%), Query Frame = 2 Query: 134 HEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDV 658 HE+SV V+ P + T S D T+K+W +LE T GH G+ V ASAS D +R++D + S+ L+ + V + F+P G TL V+G +V++W+ + L P +P ++SV+ S DG A S DG ++DV Sbjct: 53 HEKSVTCVSVSP----NKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLG-TLLVSGSWDETVRIWNLQDGTCLRML----PAHSEP---------IISVSISADGTLCATASYDGMARIWDV 209
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: WDR69_BOVIN (WD repeat-containing protein 69 OS=Bos taurus GN=WDR69 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 49/167 (29.34%), Postives = 78/167 (46.71%), Query Frame = 2 Query: 188 ALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVTRANSCIIWK 688 +L+LTGS+D+T KLW + + T TGH ++ +G + A+AS D R+F T + LE E+ ++ F+P+G L + G + ++WD T + L EG TD+ + S A++ G I GS D N+C IW+ Sbjct: 274 SLILTGSMDKTCKLWDAVNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRECVTKLEGHEGEISKISFNPQGNRL-LTGSSDKTARIWDAQTGQCLQVL-----EG--HTDE------IFSCAFNYKGDIIITGSKD-----------NTCRIWR 415
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: NLE1_PONAB (Notchless protein homolog 1 OS=Pongo abelii GN=NLE1 PE=2 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 185 PALLLTGSLDETVKLWRPDDMQLERTN-TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 652 P L++GS D T+ LW P + + T TGH + V P I ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L L E V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADE-------------VYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: NLE1_HUMAN (Notchless protein homolog 1 OS=Homo sapiens GN=NLE1 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 47/157 (29.94%), Postives = 75/157 (47.77%), Query Frame = 2 Query: 185 PALLLTGSLDETVKLWRPDDMQLERTN-TGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVF 652 P L++GS D T+ LW P + + T TGH + V P I ASAS D ++++D T +A+L + V+Q+ + + L V+G +++K+WD L L E V +V WSPDG+R+A G D + ++ Sbjct: 341 PERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWS-ADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADE-------------VYAVDWSPDGQRVASGGKDKCLRIW 483
BLAST of FC875601 vs. ExPASy Swiss-Prot
Match: GBLP_CAEEL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Caenorhabditis elegans GN=rack-1 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 48/179 (26.82%), Postives = 82/179 (45.81%), Query Frame = 2 Query: 125 ENAHEESVWAVTWVPATETRPALLLTGSLDETVKLWRPDDMQLERTNTGHCLGVVSVAAHPSGIIAASASLDSFVRVFDVDTNASIATLEASPSEVWQMQFDPKGTTLAVAGGGSASVKLWDTATWNLIATLSIPRPEGLKPTDKSSSKKFVLSVAWSPDGRRIACGSMDGTISVFDVT 661 ++ H + V V + P+ R ++++ D+ VK+W + +L+ + GH V +V P G + AS D ++D++ + TL + + M F P L A G +S+K+WD I L +PE S +S+AWS DG+ + G D I V+ V+ Sbjct: 150 DDCHTDWVSTVRFSPSN--RDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLPGN-DVINAMSFSPNRYWLCAAVG--SSIKIWDLEDKKEIEEL---KPEIASSGSSRGSSPQCISLAWSQDGQTLFAGYTDNIIRVYQVS 320 The following BLAST results are available for this feature:
BLAST of FC875601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875601 ID=FC875601; Name=FC875601; organism=Citrus clementina; type=EST; length=705bpback to top |