FC875604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.666e-27 Identity = 64/165 (38.79%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSY 653 A+ Y+G+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+ +N + G+PIR+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D SRG+GF+ +++ EA++ AI+ MNG L R++ V + Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVC---DEYGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGH 172 HSP 2 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 59/178 (33.15%), Postives = 103/178 (57.87%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKK-DTKGE 680 ++ NLD + + L++ F G +++ V D + +GYGFV F ++E A+ AI+ +N + L + + V S+ ++ L+ GA N++I N D+D+K L + FSAFG ++ K+M D ++G SRGFGF++Y + E + A+ MNG+ + R + V A K+ + +GE Sbjct: 102 FIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYGS--RGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLS-VKVMMD-NSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGE 275 HSP 3 Score: 80.4925 bits (197), Expect = 9.481e-15 Identity = 52/197 (26.40%), Postives = 101/197 (51.27%), Query Frame = 3 Query: 135 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 ++ A+ + Y+ N + ++ L E+F G ++V V D + +G+GFV + + E+A A+ +N ++ G+ + V +A Q++ + G NL++ NLD +D+ L FS +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDN-SGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTI-TSTKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 374
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27 Identity = 67/165 (40.61%), Postives = 102/165 (61.82%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSY 653 A+ YVG LDP VTE +L+E+F GPV ++ V +D VT GY +V + + D + A++ LN + G+ R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ D + G SRGF F+ Y + EA+DAAI+A+NG L +++ V + Sbjct: 46 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDIL-SCKVGTD-ENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGH 208 HSP 2 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 63/192 (32.81%), Postives = 103/192 (53.65%), Query Frame = 3 Query: 150 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKA------------SQDKKSLD-----VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 R Q Y+ N+D +VT+ +L GP ++V + +D + +G+GFV + + E A A+ LN ++ GK + +A S ++K L+ G NL++ NLD + D+ L F AFG I T+ K+MRD D+G SRGFGF+ Y S + + A+ MNG+ + + + V+ A +KD + Sbjct: 223 RAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDE-KGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTI-TSSKVMRD-DSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVR 411
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.841e-27 Identity = 71/185 (38.38%), Postives = 109/185 (58.92%), Query Frame = 3 Query: 132 GQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV-SYAYKKDTKGE 680 G+ S A+ YVG L+P V E L+E+F G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L+DTFSAFG I+ + K+ D + G S+ FGF+ Y++ EA++AAIE +NG L R++ V + KKD + + Sbjct: 42 GESSGVAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKIL-SCKVATD-EFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224 HSP 2 Score: 95.1301 bits (235), Expect = 3.720e-19 Identity = 61/209 (29.19%), Postives = 109/209 (52.15%), Query Frame = 3 Query: 129 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 +G+H +++++++ YV N+D +EE +LF G + ++Y+ KD+ +G+GFV F E A A++ LN ++ G+ I V +A + ++ L+ G NLF+ NLD +D + L + F FG I T+ K+M D + G S+GFGF+ + + E + AI MN + + + + V+ A +KD + Sbjct: 212 VGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQ-DGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTI-TSAKVMVD-EAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDVR 417 HSP 3 Score: 76.6406 bits (187), Expect = 1.369e-13 Identity = 51/182 (28.02%), Postives = 98/182 (53.85%), Query Frame = 3 Query: 141 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKK 665 SA R+ D ++ NL P + + L + F G +++ V D + +GFV + + E A+ AI+ +N + L + + ++K ++ K ++ AN +++ N+D + E+ FS FG I T+ + +D D G S+GFGF++++ E++ A+E +N + + ++I V A KK Sbjct: 133 SARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQ-SKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKI-TSIYLEKDQD-GKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKK 311
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 72/175 (41.14%), Postives = 106/175 (60.57%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV-SYAYKKDTKGE 680 A+ YVG L+P V E LL+E+F G V ++ V +D VT GY +V F ED + AI+ LN + G+P R+ + +D G N+FI NL P +D K L+DTF+AFG I+ + K+ D D G S+ FGF+ Y++ EA++AAIE +NG L R++ V + KKD + + Sbjct: 51 ASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFGKIL-SCKVATD-DMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESK 223 HSP 2 Score: 94.7449 bits (234), Expect = 4.858e-19 Identity = 62/209 (29.67%), Postives = 108/209 (51.67%), Query Frame = 3 Query: 129 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 +G+H +++++++ Y N+D +EE +LF G + ++Y+ KD +G+GFV F + E A A+ LN ++ G+ I V +A + ++ L+ G NLFI NLD +D + L + F FG I T+ ++M D +TG S+GFGF+ + S E + AI MN + + + + V+ A +KD + Sbjct: 211 VGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDH-EGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSI-TSARVMVD-ETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKDVR 416
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_COCIM (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Coccidioides immitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 68/175 (38.86%), Postives = 108/175 (61.71%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVS-YAYKKDTKGE 680 A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + D + A++ LN + G+P R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + GNS+G+GF+ Y++ EA+ AI+ +NG L +++ V + KKD + + Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNIL-SCKVAQD-EFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 227 HSP 2 Score: 90.1225 bits (222), Expect = 1.197e-17 Identity = 57/177 (32.20%), Postives = 96/177 (54.24%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGE 680 ++ NLD + + L + F G +++ V +D N +GYGFV + + E A AIK +N + L K + V K + K ++ AN +++ N+D D E+ D F FG I T+ + RD ++G SRGFGF+++ S + + AA+EA+N + +++ V A KK + E Sbjct: 146 FIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN-SKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEI-TSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREE 320 HSP 3 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 63/261 (24.14%), Postives = 111/261 (42.53%), Query Frame = 3 Query: 129 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRD-------------------PDT---------------------------------GNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 +G H A++++ + YV N+D TEE +LF + G + + + +D + +G+GFV F S ++A A++ LN G+ + V +A + +K S G NL+I NL D+D++ L + FS++G I T+ K+MRD P+T G S+GFGF+ + S + + A+ MN + + + + V+ A +KD + Sbjct: 215 VGHHIAKKDRQSKFEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRELFSSYGTI-TSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAENKDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRKDVR 474
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.711e-27 Identity = 63/165 (38.18%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSY 653 A+ Y+G+L P VTE +L+E F AGP++++ V +D T Y ++ F+ DA+ A+ +N + G+PIR+ + +D G N+FI NLD +D K LYDTFSAFG I++ + D SRG+GF+ +++ EA++ AI+ MNG L R++ V + Sbjct: 11 ASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVC---DEHGSRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGH 172 HSP 2 Score: 92.0485 bits (227), Expect = 3.149e-18 Identity = 59/172 (34.30%), Postives = 98/172 (56.98%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKK 665 ++ NLD + + L++ F G +++ V D + +GYGFV F + E A+ AI+ +N + L + + V S+ ++ L+ GA N++I N D+D+K L + FSAFG ++ K+M D D+G SRGFGF++Y + E + A+ MNG+ + R I V A K+ Sbjct: 102 FIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHGS--RGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLS-VKVMMD-DSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKR 269 HSP 3 Score: 78.1814 bits (191), Expect = 4.705e-14 Identity = 52/197 (26.40%), Postives = 100/197 (50.76%), Query Frame = 3 Query: 135 QHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 ++ A+ + Y+ N + ++ L E+F G ++V V D + +G+GFV + + E+A A+ +N ++ G+ I V +A Q++ + G NL++ NLD +D+ L F +G I T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 182 EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDD-SGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTI-TSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEER 374
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 73/187 (39.04%), Postives = 111/187 (59.36%), Query Frame = 3 Query: 132 GQHSAERNQDATA--YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV-SYAYKKDTKGE 680 G+ + E ++A+A YVG L+P V E LL+E+F G V ++ V +D VT GY +V F D AI+ LN + G+P R+ + +D G N+FI NL P +D K L+DTFSAFG I+ + K+ D + G S+ FGF+ Y++ EA++AAIE +NG L R++ V + K+D + + Sbjct: 46 GEGAGEEGEEASASLYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFGRIL-SCKVATD-ELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESK 230 HSP 2 Score: 99.7525 bits (247), Expect = 1.510e-20 Identity = 64/209 (30.62%), Postives = 109/209 (52.15%), Query Frame = 3 Query: 129 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 +G+H ++R++++ YV NL P+V E+F GPV +V++ D+ +G+GFV F + E A A+K +N ++ G+ + V +A + ++ LD G NLF+ NLD +D + L + F FG I T+ ++M D D G S+GFGF+ + S E + AI MN + + + + V+ A +KD + Sbjct: 218 VGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQ-EGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTI-TSARVMVD-DAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDVR 423
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 69/172 (40.12%), Postives = 103/172 (59.88%), Query Frame = 3 Query: 147 ERNQDATA----YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV 647 E NQ T YVG+LDP V+E L+++F G V ++ V +D +T GY +V F + A AI+ LN + GK R+ + +D GA N+FI NL PD+D K LYDTFS FG I+++ K+ D +TG S+GFG++ ++ E++ AI+A+NG L ++I V Sbjct: 26 EENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSS-KVATD-ETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYV 195 HSP 2 Score: 85.8853 bits (211), Expect = 2.257e-16 Identity = 55/185 (29.73%), Postives = 97/185 (52.43%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 Y+ N++ + T++ EL + G +V + + ++G+GFV F + EDA ++ LN + G+P+ VN+A + +K + G NLFI NLD +D+K L + F+ +G I T+ K+M + G S+GFGF+ + + E + AI N Q + + + V+ A +KD + Sbjct: 219 YIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGE-NKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTI-TSAKVM-TTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVR 400
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 4.847e-27 Identity = 62/175 (35.43%), Postives = 108/175 (61.71%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV-SYAYKKDTKGE 680 A+ YVG+L P VTE +L+E F AGP++++ + +D +T+ Y +V F+ +DA++A+ +N + GKP+R+ + +D G N+F+ NLD ++ K LYDT SAFG I++ + D S+G+GF+ +++ EA++ AI+ MNG L R++ V + +K+ + E Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVC---DENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182 HSP 2 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 59/172 (34.30%), Postives = 99/172 (57.56%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK-ASQDKKSLDVGA------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKK 665 +V NLD + + L++ G +++ V D N +GYGFV F + E A+ AIK +N + L G+ + V + S+ ++ ++GA N++I N D+D++ L D F FG ++ K+M D ++G S+GFGF+S++ E + A++ MNG+ L +QI V A KK Sbjct: 102 FVKNLDKSINNKALYDTVSAFGNILSCNVVCDE--NGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALS-VKVMTD-ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKK 269 HSP 3 Score: 90.5077 bits (223), Expect = 9.162e-18 Identity = 60/194 (30.93%), Postives = 98/194 (50.52%), Query Frame = 3 Query: 144 AERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 A + Y+ N + +E L +LF + GP ++V V D + +G+GFV F EDA A+ +N +L GK I V +A QD+ + NL++ NLD +D++ L FS FG I T+ K+M + G S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 185 ARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDE-SGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTI-TSAKVMMEG--GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEER 374
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.330e-27 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSY 653 A+ YVG+L P VTE +L+E F AGP++++ V +D T GY ++ F+ DA+ A+ +N L G+PIR+ + +D G N+FI NL+ +D K LYDTFS FG I++ D SRGFGF+ +++ EA+ AI MNG L R++ V + Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVAC---DEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGH 172 HSP 2 Score: 84.7297 bits (208), Expect = 5.027e-16 Identity = 57/185 (30.81%), Postives = 97/185 (52.43%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-----------------QDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 YV NL V E+ L +LF Q G +++V V +D + + +GFV F E+A A+ +N ++ G+ + +A QD+ G NL++ NLD +D+ L FS +GVI T+ K+M + G+S+GFGF+ + S E + A+ MNG+ + + + V+ A +K+ + Sbjct: 194 YVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDN-SGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVI-TSAKVMTEG--GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEER 374 The following BLAST results are available for this feature:
BLAST of FC875604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 191
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875604 ID=FC875604; Name=FC875604; organism=Citrus clementina; type=EST; length=696bpback to top |