FC875604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP5_ARATH (Polyadenylate-binding protein 5 OS=Arabidopsis thaliana GN=PAB5 PE=1 SV=2) HSP 1 Score: 119.013 bits (297), Expect = 2.405e-26 Identity = 67/188 (35.64%), Postives = 111/188 (59.04%), Query Frame = 3 Query: 114 VGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 V A + + + +++ YVG+LDP V E L +LF Q PV N+ V +D +T+ GY +V F + EDA A++ LN + +PIR+ +++D + L N+FI NLD +D K LY+TFS+FG I+ + K+ D G S+G+GF+ ++ E + AAI+ +NG L +Q+ V + ++ + Sbjct: 29 VAAAAAAAEALQTHPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRD-LTHRSLGYAYVNFANPEDASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTIL-SCKVAMDV-VGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDR 213 HSP 2 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 61/177 (34.46%), Postives = 94/177 (53.11%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNK--ASQDKKSLDVGA-----NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGE 680 ++ NLD + + L+E F G +++ V D V +GYGFV+F EE A AI LN + L K + V QD+ + GA N+++ NL ++ + L TF +G I ++ +M+D +GNSR FGF+++ S EA+ A+E MNG L + V A KK + E Sbjct: 135 FIKNLDASIDNKALYETFSSFGTILSCKVAMD-VVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDI-SSAVVMKD-QSGNSRSFGFVNFVSPEAAAVAVEKMNGISLGEDVLYVGRAQKKSDREE 308 HSP 3 Score: 80.8777 bits (198), Expect = 7.259e-15 Identity = 59/186 (31.72%), Postives = 102/186 (54.84%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLD--------------VGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 YV NL ++T++ L + F + G + + V KD+ N + +GFV F S E A A++ +N I L G+ + R K S ++ L G+NL++ NLD V+++ L + FS +G VT+ K+M + G SRGFGF++Y + E + A++ MNG+ + + + V+ A +K+ + Sbjct: 228 YVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGN-SRSFGFVNFVSPEAAAVAVEKMNGISL-GEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGN-VTSCKVMMNSQ-GLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQRKEER 409
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 67/178 (37.64%), Postives = 105/178 (58.99%), Query Frame = 3 Query: 141 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVS-YAYKKD 668 S N +A+ YVG LDP +TE LL+++F GP+ ++ V +D VT GY +V + E AI+ LN ++ G+P R+ + +D G+ N+FI NL P +D K L++TFS FG ++ + K+ D + GNSRGFGF+ + + AIEA+NG + ++ V+ + KKD Sbjct: 43 SKVENNNASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVL-SCKVALD-ENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKD 218 HSP 2 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 58/185 (31.35%), Postives = 97/185 (52.43%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 YV N+D + T+E +LF Q G +V+ + KD +G+GFV F A A++ LN + + + V +A + +K + G NLFI NLD +D++ L + F+ +G I T+ ++MRD + GNS+GFGF+ + S E + A+ N Q + + + V+ A +KD + Sbjct: 234 YVKNIDVETTDEEFEQLFSQYGEIVSAALEKD-AEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTI-TSARVMRDQE-GNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDVR 415 HSP 3 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 51/180 (28.33%), Postives = 91/180 (50.56%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYG----------KPIRVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGE 680 ++ NL P + + L E F G V++ V D N +G+GFV F+ E DA AI+ +N + + G K R++K + K + N+++ N+D + ++ FS +G IV+ + +D + G +GFGF+++ A+ A+E +NG+ + + V A KK + E Sbjct: 141 FIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGN-SRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANF---TNIYVKNIDVETTDEEFEQLFSQYGEIVS-AALEKDAE-GKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAE 314
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP3_ARATH (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.103e-26 Identity = 63/184 (34.24%), Postives = 111/184 (60.33%), Query Frame = 3 Query: 147 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKS-LDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGERHGTP 695 + + +++ Y G+LDP+VTE L++LF VV+V V +D+ GY ++ F + DA A++ LN L+ +PIR+ +++D + L N+FI NLD +D K L++TFS+FG I++ K+ D TG S+G+GF+ ++ E++ AAI+ +NG + +Q+ V + ++ + TP Sbjct: 44 QTHPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQ-NRRSLGYAYINFSNPNDAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTILSC-KVAMDV-TGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTP 224 HSP 2 Score: 93.5893 bits (231), Expect = 1.082e-18 Identity = 61/177 (34.46%), Postives = 94/177 (53.11%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGE 680 ++ NLD + + L+E F G +++ V D VT +GYGFV+F EE A AI LN + + K + R +A + N+++ NL ++ E L TF FGVI ++ +MRD +GNSR FGF++++ EA+ +A+E MNG L + V A KK + E Sbjct: 139 FIKNLDASIDNKALFETFSSFGTILSCKVAMD-VTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVI-SSAVVMRD-QSGNSRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREE 312 HSP 3 Score: 83.1889 bits (204), Expect = 1.463e-15 Identity = 58/185 (31.35%), Postives = 99/185 (53.51%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI---RVNKASQDKKSL--------------DVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 YV NL ++ E+ L + F + G + + V +D+ N + +GFV F E A A++ +N I L + R K S+ ++ L GANL++ NLD VD++ L + FS +G VT+ K+M +P G SRGFGF++Y + E + A+ MNG+ + + + ++ A +K+ + Sbjct: 232 YVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGN-SRCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVDDEKLKEMFSEYGN-VTSSKVMLNPQ-GMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYIALAQRKEDR 413
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25 Identity = 62/176 (35.23%), Postives = 105/176 (59.66%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVS-YAYKKDTKGER 683 A+ YVG+L P+VTE +L+E F AGP++++ + +D++T GY +V ++ DA A++ LN + G+P+R+ + +D G N+FI NL +D K LY+ FSAFG I++ D +G+GF+ + E+++ AI+ MNG +L +R+I V + K+ + ER Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVAC---DEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAER 174
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_PICST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia stipitis GN=PAB1 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25 Identity = 68/175 (38.86%), Postives = 104/175 (59.43%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV-SYAYKKDTKGE 680 A+ YVG L+ V E L+E+F G V ++ V +D V+ GY +V + ED + AI+ LN + G+P R+ + +D + G N+FI NL P +D K L+DTFS FG I+ + K+ D D G S+ FGF+ Y++ EA++AAIE +NG L R++ V + KKD + + Sbjct: 52 ASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKIL-SCKVATD-DMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224 HSP 2 Score: 96.2857 bits (238), Expect = 1.670e-19 Identity = 62/209 (29.67%), Postives = 110/209 (52.63%), Query Frame = 3 Query: 129 LGQHSAERNQDA----------TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 +G+H +++++++ YV N+D + +EE L +LF G + ++Y+ KD +G+GFV + E A A++ LN ++ G+ I V +A + ++ ++ G NLFI NLD +D + L + F FG I T+ ++M D +TG S+GFGF+ + S E + AI MN + + + V+ A +KD + Sbjct: 212 VGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKD-AEGKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGTI-TSARVMVD-ETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYVALAQRKDVR 417 HSP 3 Score: 78.5666 bits (192), Expect = 3.603e-14 Identity = 52/187 (27.81%), Postives = 102/187 (54.55%), Query Frame = 3 Query: 141 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGE 680 SA R+ D ++ NL P + + L + F G +++ V D + + +GFV + + E A+ AI+ +N + L + + ++K ++ K ++ AN +++ N+D + E+ L F+ +G I T+ + +D + G S+GFGF++Y+ EA+ A+E +N + + ++I V A KK + E Sbjct: 133 SARRSGDGNIFIKNLHPAIDNKALHDTFSTFGKILSCKVATDDMGQ-SKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAI-TSIYLEKDAE-GKSKGFGFVNYEGHEAAVKAVEELNDKEINGQKIYVGRAQKKRERME 316
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_EMENI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25 Identity = 65/169 (38.46%), Postives = 101/169 (59.76%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKK 665 A+ YVG LDP VTE +L+ELF G V ++ V +D VT GY +V + + A+ LN + GKP R+ + +D G N+FI NLD +D K L+DTF+AFG I+ + K+ +D + G S+G+GF+ Y++ EA++ AI+ +NG L +++ V + K Sbjct: 42 ASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNIL-SCKVAQD-EFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISK 208 HSP 2 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 55/177 (31.07%), Postives = 100/177 (56.50%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI----RVNKASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGE 680 ++ NLD + + L + F G +++ V +D + +GYGFV + + E A+ AIK +N + L K + ++K + K ++ AN ++I N+DP+V+++ F FG I T+ + RD + G SRGFGF+++ + E++ AA+E MN + + +++ V A KK + E Sbjct: 133 FIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEF-GVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFEEMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEI-TSATLSRDSE-GKSRGFGFVNFSTHESAQAAVEEMNDKEVRSQKLYVGRAQKKHEREE 306
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4) HSP 1 Score: 116.316 bits (290), Expect = 1.559e-25 Identity = 65/167 (38.92%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 153 NQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGA-NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVS 650 N A+ YVG+L+P V+E L+++F G V ++ V +D +T GY +V F E AI+ LN + G+ R+ + +D G+ N+FI NL PD+D K LYDTFS FG I+++ KI D + G S+GFGF+ ++ A+ AI+A+NG L ++I V+ Sbjct: 35 NSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSS-KIATD-ENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVA 199 HSP 2 Score: 101.293 bits (251), Expect = 5.190e-21 Identity = 61/185 (32.97%), Postives = 101/185 (54.59%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDV-----------------GANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 YV N++ + T+E ELF + GP+V+ + KD L +G+GFV + EDA A++ LN +L G+ + V +A + + + V G NLF+ NLD VD++ L + F+ +G I T+ K+MR + G S+GFGF+ + + E + AI N Q + + + V+ A +KD + Sbjct: 222 YVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKL-KGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTI-TSAKVMRT-ENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVR 403 HSP 3 Score: 77.7962 bits (190), Expect = 6.145e-14 Identity = 51/185 (27.57%), Postives = 93/185 (50.27%), Query Frame = 3 Query: 141 SAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPI-------RVNKASQDKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTK 674 S + ++ NL P + + L++ F G +++ + D +G+GFV F E A AI LN + L G+ I R + SQ +++ NL++ N++ + ++ + F+ FG IV+ + +D D G +GFGF++Y+ E + A+EA+N L ++ V A KK+ + Sbjct: 119 SLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDE-NGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVS-ASLEKDAD-GKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNER 300
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.536e-25 Identity = 67/183 (36.61%), Postives = 109/183 (59.56%), Query Frame = 3 Query: 108 PGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSY 653 P VG N +++A+ + + YVG LDP VTE +L+E+F G V ++ V +D VT GY +V F + D + A++ LN + +P R+ + +D G N+FI NLD +D K L+DTF+AFG I++ + +TG S G+GF+ Y++ EA++AAI+ +NG L +++ V + Sbjct: 30 PAVG-NGEQRNNADAANNTSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCK--VATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGH 208 HSP 2 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 57/188 (30.32%), Postives = 100/188 (53.19%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQ-----------------DKKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGER 683 Y N+DP+VT++ +LF + G + + + +D +G+GFV F +A A+ L+ G+ + V +A + +K + G NL++ N+ D++ L + F+ FG I T+ KIMR P +G SRGFGF+ Y + E ++ A+ MNG+ L +R + V+ A +KD + ++ Sbjct: 230 YAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDE-DGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAI-TSCKIMRAP-SGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVRRQQ 414 HSP 3 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 50/184 (27.17%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 150 RNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVN----KASQDKKSLDVGAN---LFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKKDTKGE 680 R ++ NLD + + L + F G +++ V + +L GYGFV + + E A+ AIK +N + L K + V + + K + AN ++ N+DP+V + F+ FG I T+ + RD D G S+GFGF++++ + A++ ++ +++ V+ A KK + E Sbjct: 131 RTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETGSL--GYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKI-TSCVLQRDED-GKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREE 310
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV 647 A YVG+LDP VTE++L++ F AGP+ + +D VT GYG+V FR DA++A+ +N + GKP R+ + D + G N+FI NLD +D + L+ FSAFG I++ + D S+G+ ++ +DS A++ AI MNG L +RQ+ V Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC---DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV 177 HSP 2 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 52/185 (28.11%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 147 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-----------------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVS 650 +R +V N+ + +E L ELF + GP +V V +D + +G+GFV + + E A A+ L+ + GK + V +A + +KS G ++I NLD ++++ L + FS+FG I + K+M + G +GFG + + SFE + A++ MNG+ + + + V+ Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSI-SRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVT 374 HSP 3 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 48/173 (27.75%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVGA-------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKK 665 ++ NLD + L+ LF G +++ V D N +GY +V F S A+ AI +N ++L + + V + ++++ +V N+F+ N+ D+D++ L + F +G + K++RD +G S+GFGF+ Y++ EA+ A+ ++G+ + + + V A KK Sbjct: 109 FIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGP-TESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKK 277
BLAST of FC875604 vs. ExPASy Swiss-Prot
Match: PABP5_PANTR (Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.011e-24 Identity = 63/163 (38.65%), Postives = 96/163 (58.90%), Query Frame = 3 Query: 162 ATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVG-ANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITV 647 A YVG+LDP VTE++L++ F AGP+ + +D VT GYG+V FR DA++A+ +N + GKP R+ + D + G N+FI NLD +D + L+ FSAFG I++ + D S+G+ ++ +DS A++ AI MNG L +RQ+ V Sbjct: 18 AALYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVC---DDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYV 177 HSP 2 Score: 79.337 bits (194), Expect = 2.112e-14 Identity = 52/185 (28.11%), Postives = 94/185 (50.81%), Query Frame = 3 Query: 147 ERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQD-----------------KKSLDVGANLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVS 650 +R +V N+ + +E L ELF + GP +V V +D + +G+GFV + + E A A+ L+ + GK + V +A + +KS G ++I NLD ++++ L + FS+FG I + K+M + G +GFG + + SFE + A++ MNG+ + + + V+ Sbjct: 194 DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRD-ASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSI-SRAKVMME--VGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVT 374 HSP 3 Score: 71.633 bits (174), Expect = 4.404e-12 Identity = 48/173 (27.75%), Postives = 93/173 (53.76%), Query Frame = 3 Query: 171 YVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKAS-QDKKSLDVGA-------NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLXHRQITVSYAYKK 665 ++ NLD + L+ LF G +++ V D N +GY +V F S A+ AI +N ++L + + V + ++++ +V N+F+ N+ D+D++ L + F +G + K++RD +G S+GFGF+ Y++ EA+ A+ ++G+ + + + V A KK Sbjct: 109 FIKNLDKSIDNRALFYLFSAFGNILSCKVVCD--DNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGP-TESVKVIRDA-SGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKK 277 The following BLAST results are available for this feature:
BLAST of FC875604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 191
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875604 ID=FC875604; Name=FC875604; organism=Citrus clementina; type=EST; length=696bpback to top |