FC875609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB4_RAT (Guanine nucleotide-binding protein subunit beta-4 OS=Rattus norvegicus GN=Gnb4 PE=2 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF DG S G D T LW+ G T+ H +V + ++PD +S D WD+ G + F GH S++NAV F A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB4_MOUSE (Guanine nucleotide-binding protein subunit beta-4 OS=Mus musculus GN=Gnb4 PE=2 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF DG S G D T LW+ G T+ H +V + ++PD +S D WD+ G + F GH S++NAV F A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDGQIITSSG-DTTCALWDIETGQQTTTFTGHSGDVMSLSLSPDLKTFVSGACDASSKLWDIRDGMCRQSFTGHISDINAVSFFPSGYAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB1_RAT (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Rattus norvegicus GN=Gnb1 PE=1 SV=4) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF D S G D T LW+ G T+ H +V + + PD +S D WDV G + F GHES++NA+ F + A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB1_PONAB (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Pongo abelii GN=GNB1 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF D S G D T LW+ G T+ H +V + + PD +S D WDV G + F GHES++NA+ F + A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB1_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Mus musculus GN=Gnb1 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF D S G D T LW+ G T+ H +V + + PD +S D WDV G + F GHES++NA+ F + A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB1_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Homo sapiens GN=GNB1 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF D S G D T LW+ G T+ H +V + + PD +S D WDV G + F GHES++NA+ F + A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB1_DANRE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Danio rerio GN=gnb1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF D S G D T LW+ G T+ H +V + + PD +S D WDV G + F GHES++NA+ F + A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB1_CANFA (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Canis familiaris GN=GNB1 PE=2 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF D S G D T LW+ G T+ H +V + + PD +S D WDV G + F GHES++NA+ F + A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBB1_BOVIN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 OS=Bos taurus GN=GNB1 PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 43/137 (31.39%), Postives = 61/137 (44.53%), Query Frame = 3 Query: 231 SVSDLPRTEANV-----LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 S+ +L E NV L GH G + RF D S G D T LW+ G T+ H +V + + PD +S D WDV G + F GHES++NA+ F + A+ D + R +D R+ Sbjct: 122 SIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSG-DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRA 257
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: PRP46_CANGA (Pre-mRNA-splicing factor PRP46 OS=Candida glabrata GN=PRP46 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 38/122 (31.15%), Postives = 59/122 (48.36%), Query Frame = 3 Query: 264 VLKGHEGAVLAARFNGDGNYCLSCGK-DRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 V+ GH G V + N + G D+TI++WN G T K H VRD+ ++ + + S D+ + WD+ IR + GH S V+ V + VV +AG D ++ WD R+ Sbjct: 110 VIHGHHGWVRCIAMDKVDNEWFATGSNDKTIKIWNLASGKLKVTLKAHDMTVRDLAISNRHPYMFSVSEDKTVKCWDLEKNTAIRNYHGHLSGVHTVDIHPTVDVVVTAGRDSVVKVWDIRT 231 The following BLAST results are available for this feature:
BLAST of FC875609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875609 ID=FC875609; Name=FC875609; organism=Citrus clementina; type=EST; length=688bpback to top |