FC875609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: NUDFA_NEUCR (Nuclear distribution protein pac-1a OS=Neurospora crassa GN=pac-1a PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 48/143 (33.57%), Postives = 67/143 (46.85%), Query Frame = 3 Query: 225 EMSVSDLPRTEANVLKGHEGAVLAARFNGD-GNYCL-SCGKDRTIRLWNPHRGI-HIKTYKPHGREVRDVHVTPDNSKL-ISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEP 641 + + +L RT +KGH AVL + G GN L SC D TI+LW+P +I+T H V V P + L +S D+ + WDVSTG ++ RGH V V + + S D + R WD + EP Sbjct: 142 DWELGELERT----IKGHTKAVLDVDYGGPRGNTLLASCSSDLTIKLWDPLDSYKNIRTLPGHDHSVSAVRFIPGSGNLLVSASRDKTLRIWDVSTGYCVKTLRGHAEWVRDVCPSLDGKYILSTSDDYTSRLWDVTITNPEP 280
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WSB1_XENTR (WD repeat and SOCS box-containing protein 1 OS=Xenopus tropicalis GN=wsb1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCL-SCGKDRTIRLWN-PHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 L H V F DG+ L S +D+T+R+W+ G +K + H V +PD+S L S G + +F WD+ +IRK GH ++V A +F+ +++A+A YD + WD Sbjct: 166 LMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYCCAFSPDSSMLCSVGAGKAVFLWDMDKYTMIRKLDGHYNDVVACEFSPDGALLATASYDTRVYVWD 284
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WDR61_XENTR (WD repeat-containing protein 61 OS=Xenopus tropicalis GN=wdr61 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 32/120 (26.67%), Postives = 57/120 (47.50%), Query Frame = 3 Query: 261 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDC 620 + L+GH + + F+ D ++ D I+++ T HG V +V +PD++ +S D+ + WDVS + F H+ +V VK+N+ S + S DQ + +DC Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYEVQHASLAATLSGHGSWVLNVAFSPDDTHFVSSSSDKSVKVWDVSARTCVHTFLDHQDQVWGVKYNKNGSKIVSVADDQEIHVYDC 303
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WDR61_DANRE (WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 33/120 (27.50%), Postives = 60/120 (50.00%), Query Frame = 3 Query: 261 NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDC 620 + L+GH + + F+ D ++ D I++++ T HG V V +PD++ +S D+ I WD S+ + F H+ +V +VK+N S + SAG D+++ +DC Sbjct: 184 HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFVSSSSDKSIKVWDTSSRSCVNTFFDHQDQVWSVKYNPTGSKIVSAGDDRAIHIYDC 303
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: GBLP_HYDAT (Guanine nucleotide-binding protein subunit beta-like protein OS=Hydra attenuata GN=RACK1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 35/120 (29.17%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWD-VSTGRVIRKFRGHESEVNAVKF--NEYSSVVASAGYDQSLRAWD 617 L GH V + DG + LSC D+T+RLW+ ++GI K + H ++V V + DN +++S D I W+ + + + H V+ V+F N + ++ S G+D+ ++ W+ Sbjct: 59 LTGHNHFVSDVVLSSDGQFALSCSWDKTLRLWDLNQGITTKQFVGHTKDVLSVAFSADNRQIVSGSRDNTIKLWNTLGQCKYTIQDESHSEWVSCVRFSPNTQNPIIVSCGWDKMVKVWN 178 The following BLAST results are available for this feature:
BLAST of FC875609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875609 ID=FC875609; Name=FC875609; organism=Citrus clementina; type=EST; length=688bpback to top |