FC875609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WDR38_HUMAN (WD repeat-containing protein 38 OS=Homo sapiens GN=WDR38 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.899e-16 Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCR 623 L GH G V RF+ DG+ S D T+RLW+ R ++ K H R V V +PD+ +L S G D+++ WDV +G+++R GH + + F+ + +A+ +D ++ WD R Sbjct: 59 LGGHTGPVKFCRFSPDGHLFASASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLR 177
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WDR5B_HUMAN (WD repeat-containing protein 5B OS=Homo sapiens GN=WDR5B PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.399e-16 Identity = 37/120 (30.83%), Postives = 69/120 (57.50%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L GH AV + +F+ +G + S DR I +W + G + KT H E+ DV + D+S+L+S D+ + WDV +G+ ++ +GH + V FN S+++ S +D++++ W+ ++ Sbjct: 37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKT 156 HSP 2 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L GH + ++ D + +S D+T++LW+ G +KT K H V + P ++ +IS D + W+V TG+ ++ H V+AV FN S++ S YD R WD S Sbjct: 79 LYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAAS 198
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.357e-16 Identity = 36/121 (29.75%), Postives = 68/121 (56.20%), Query Frame = 3 Query: 264 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 + GH V +F+ + NY + D+T+RLW+ +G ++ + H V + +P+ L S G D+++ WD+++G + ++ RGH + ++ F+ S ++ASA D S+R WD R+ Sbjct: 421 IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRN 541 HSP 2 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 40/134 (29.85%), Postives = 67/134 (50.00%), Query Frame = 3 Query: 222 KEMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCR 623 +E D TE +L+GH G V + RF D + LSC +D +IR W+ + Y+ H V D+ ++P + S DR W +R + GH ++V+ VKF+ S+ +A+ D+++R W + Sbjct: 323 EEDDEDDNAGTEMKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPYSLYFASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQ 456
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_DICDI (Lissencephaly-1 homolog OS=Dictyostelium discoideum GN=lis1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.862e-15 Identity = 48/140 (34.29%), Postives = 66/140 (47.14%), Query Frame = 3 Query: 201 LVPAQRSKEMSVSDLPRTE-ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 +V A + V D E LKGH AV F+ GN SC D TI+LW+ +KT H V V TP +LIS D+ I W+ +TG I+ GHE V + +E S +AS DQ+++ W+ Sbjct: 121 MVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSCIASCSNDQTIKTWN 260 HSP 2 Score: 72.4034 bits (176), Expect = 2.516e-12 Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 3 Query: 243 LPRT-EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 LPR E ++L GH + + +F+ + +S +D TI++W+ G +T K H V+D+ + L SC D I WD T ++ GH+ V+ V+F + S+ D++++ W+ Sbjct: 93 LPRPPEKHILTGHRNCINSVKFHPSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAVQDIDFDKTGNLLASCSADLTIKLWDFQTYDCVKTLHGHDHNVSCVRFTPSGDQLISSSRDKTIKVWE 218
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 2.432e-15 Identity = 44/131 (33.59%), Postives = 66/131 (50.38%), Query Frame = 3 Query: 225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 E + + +E +L GH G V A F+ D NY LS +D T+RLW+ + YK H V D +P +S G DR W + +R F GH ++VN +F+ S+ VA+ D+++R WD Sbjct: 525 ERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWD 655 HSP 2 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 31/118 (26.27%), Postives = 60/118 (50.85%), Query Frame = 3 Query: 264 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 + GH V RF+ + NY + DRT+RLW+ G ++ + H + + +P+ L + D ++ WD+ G ++ + +GH V +++F+ ++AS D ++R WD Sbjct: 622 IFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WDR5B_PONAB (WD repeat-containing protein 5B OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15 Identity = 35/120 (29.17%), Postives = 69/120 (57.50%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L GH AV + +F+ +G + S DR I +W + G + +T H E+ DV + D+S+L+S D+ + WD+ +G+ ++ +GH + V FN S+++ S +D++++ W+ ++ Sbjct: 37 LVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKT 156 HSP 2 Score: 73.9442 bits (180), Expect = 8.648e-13 Identity = 37/120 (30.83%), Postives = 59/120 (49.17%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L GH + ++ D + +S D+T++LW+ G +KT K H V + P ++ +IS D + W+V TG+ ++ H V+AV FN S++ S YD R WD S Sbjct: 79 LYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDMRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAAS 198
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.176e-15 Identity = 42/151 (27.81%), Postives = 78/151 (51.66%), Query Frame = 3 Query: 204 VPAQRSKEMSVSDLPRTEAN----------VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 +PA+R++ S+ PR E L GH A+ + +F+ +G + S D I +W + G KT H E+ DV + D+S+L+S D+ + WD+ +G+ ++ +GH V FN S+++ S +D+S++ W+ ++ Sbjct: 6 LPAERAQ--SLLSAPRREEEPQKPNYALRLTLAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154 HSP 2 Score: 70.8626 bits (172), Expect = 7.321e-12 Identity = 34/120 (28.33%), Postives = 58/120 (48.33%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L GH + ++ D + +S D+T+++W+ G +KT K H V P ++ ++S D + W+V TG+ ++ H ++AV FN S++ S YD R WD S Sbjct: 77 LYGHSLEISDVAWSSDSSRLVSASDDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAAS 196
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WDR5B_RAT (WD repeat-containing protein 5B OS=Rattus norvegicus GN=Wdr5b PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 36/120 (30.00%), Postives = 66/120 (55.00%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L GH A+ + +F+ +G + S D I +W + G KT H E+ DV + D+S+L+S D+ + WDV +G+ ++ +GH V FN S+++ S +D+S++ W+ ++ Sbjct: 35 LAGHSAAISSVKFSPNGEWLASSAADALIIIWGAYDGKCKKTLYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKT 154 HSP 2 Score: 69.707 bits (169), Expect = 1.631e-11 Identity = 34/120 (28.33%), Postives = 58/120 (48.33%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L GH + ++ D + +S D+T++LW+ G +KT K H V P ++ ++S D + W+V TG+ ++ H ++AV F+ S++ S YD R WD S Sbjct: 77 LYGHSLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDGLCRIWDAAS 196
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSVMSV 683 L GH G V F + N LSC +D TIRLW+ + TY+ H V DV P +SC D+ W + + +R F GH S+V+ V+F+ S+ VA+ D+++R WD + + + ++++ + SV S+ Sbjct: 446 LMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWD--NMTGQSVRLMTGHKGSVSSL 582 HSP 2 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 35/121 (28.93%), Postives = 59/121 (48.76%), Query Frame = 3 Query: 270 KGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHS 632 +GH V RF G Y +SC D+T RLW ++ + H +V V P+++ + + DR + WD TG+ +R GH+ V+++ F+ +AS D ++ WD + S Sbjct: 489 RGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGS 609 HSP 3 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 36/118 (30.51%), Postives = 55/118 (46.61%), Query Frame = 3 Query: 264 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 V GH V +F+ + NY + DRT+RLW+ G ++ H V + + L S D I WD+S G ++ H S V + F+ +V+A+AG D +L WD Sbjct: 529 VFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: PRP46_SCHPO (Pre-mRNA-splicing factor prp46 OS=Schizosaccharomyces pombe GN=prp5 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15 Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 3 Query: 246 PRTEANVLKGHEGAVLAARFN-GDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSVMSV 683 P T V+ GH G V G+ +C G DRTI++W+ G+ T H VR + V+P + L SCG D+ + WD+ T +VIR + GH S V A+K + V+ +AG D R WD R+ + + ++ + +V S+ Sbjct: 152 PWTLMRVISGHLGWVRCVDVEPGNQWFCTGAG-DRTIKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARVWDMRTR--QNVHVLSGHKSTVASL 295 The following BLAST results are available for this feature:
BLAST of FC875609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875609 ID=FC875609; Name=FC875609; organism=Citrus clementina; type=EST; length=688bpback to top |