FC875609 | Citrus Genome Database

Overview


Name	FC875609
Unique Name	FC875609
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	688

Libraries


Library Name	Type
CTVClemen1	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Ccv1_Contig10276	contig	Ccv1_Contig10276:1..688.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_MACFA (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 4.148e-15
Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAW-----DCRSHSTEPIQIID 656
            +    D  RT    LKGH  +V    F+  G    SC  D TI+LW+      I+T   H   V  V + P+   L+S   D+ I  W+V TG  ++ F GH   V  V+ N+  +++AS   DQ++R W     +C++   E   +++
Sbjct:  136 DYETGDFERT----LKGHTDSVQDISFDHSGKLLTSCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617
            E  + +   +E  +L GH G V  A F+ D NY LS  +D T+RLW+      +  YK H   V D   +P     +S G DR    W     + +R F GH ++VN  +++  S+ VA+   D+++R WD
Sbjct:  526 ERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSNYVATGSADRTVRLWD 656

HSP 2 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 30/118 (25.42%), Postives = 60/118 (50.85%), Query Frame = 3

Query:  264 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617
            +  GH   V   R++ + NY  +   DRT+RLW+   G  ++ +  H   +  +  +P+   L +   D ++  WD+  G ++ + +GH   V +++F+    ++AS   D ++R WD
Sbjct:  623 IFAGHLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 740

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: PKWA_THECU (Probable serine/threonine-protein kinase pkwA OS=Thermomonospora curvata GN=pkwA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 47/142 (33.10%), Postives = 69/142 (48.59%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHS--------TEPIQII 653
            TE  VLKGH   V A  F+ DG+   S  +D TIRLW+   G      +     V  +  +PD S L+  G D  +  WDV++G  +  F GH   V AV F+   +++AS   D+++R WD  +          TEP+  +
Sbjct:  576 TEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVATGKERDVLQAPAENVVSLAFSPDGSMLVH-GSDSTVHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSV 716

HSP 2 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 41/121 (33.88%), Postives = 58/121 (47.93%), Query Frame = 3

Query:  255 EANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617
            E + L+GH   V A  F+ DG    S   D T+RLW+         ++ H   V D+  +PD S + S   D     W+V+TG      +GH   V AV F+   S+VAS   D ++R WD
Sbjct:  493 ELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWD 613

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: HETE1_PODAN (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina GN=HET-E1 PE=4 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.417e-15
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 3

Query:  267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSVMSV 683
            L+GH  +VL+  F+ DG    S   D+TI++W+   G   +T + HG  V  V  +PD  ++ S   D+ I  WD ++G   +   GH   V +V F+     VAS   D +++ WD  S +    Q ++    SV+SV
Sbjct:  837 LEGHGSSVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTC--TQTLEGHGSSVLSV 973

HSP 2 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 41/125 (32.80%), Postives = 62/125 (49.60%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626
            T    L+GH G V +  F+ DG    S   D TI++W+   G   +T + HG  V  V  +PD  ++ S  GD+ I  WD ++G   +   GH   V +V F+     VAS   D++++ WD  S
Sbjct:  916 TCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTAS 1040

HSP 3 Score: 78.9518 bits (193), Expect = 2.688e-14
Identity = 46/144 (31.94%), Postives = 71/144 (49.31%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSVMSV 683
            T    L+GH  +VL+  F+ DG    S   D+TI++W+   G   +T + HG  V  V  +PD  ++ S   D+ I  WD ++G   +   GH   V +V F+     VAS   D +++ WD  S +    Q ++   DSV SV
Sbjct:  958 TCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTC--TQTLEGHGDSVWSV 1099

HSP 4 Score: 77.7962 bits (190), Expect = 5.989e-14
Identity = 45/144 (31.25%), Postives = 71/144 (49.31%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSVMSV 683
            T    L+GH G+V +  F+ D     S   D+TI++W+   G   +T + HG  V+ V  +PD  ++ S   D  I  WD ++G   +   GH S V +V F+     VAS   D++++ WD  S +    Q ++    SV SV
Sbjct:  874 TGTQTLEGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASGTC--TQTLEGHGGSVWSV 1015

HSP 5 Score: 75.0998 bits (183), Expect = 3.882e-13
Identity = 40/125 (32.00%), Postives = 61/125 (48.80%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626
            T    L+GH G+V +  F+ DG    S   D+TI++W+   G   +T + HG  V+ V  +PD  ++ S   D  I  WD  +G   +   GH   V +V F+     VAS   D +++ WD  S
Sbjct: 1000 TCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAAS 1124

HSP 6 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 40/125 (32.00%), Postives = 61/125 (48.80%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626
            T    L+GH G V +  F+ DG    S   D TI++W+   G   +T + HG  V+ V  +PD  ++ S   D+ I  WD ++G   +   GH   V +V F+     VAS   D +++ WD  S
Sbjct: 1126 TCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIWDTAS 1250

HSP 7 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 40/125 (32.00%), Postives = 60/125 (48.00%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626
            T    L+GH G V +  F+ DG    S   D TI++W+   G   +T + HG  V  V  +PD  ++ S   D  I  WD ++G   +   GH   V++V F+     VAS   D +++ WD  S
Sbjct: 1042 TCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAAS 1166

HSP 8 Score: 70.0922 bits (170), Expect = 1.249e-11
Identity = 39/125 (31.20%), Postives = 60/125 (48.00%), Query Frame = 3

Query:  252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626
            T    L+GH  +V +  F+ DG    S   D TI++W+   G   +T + HG  V  V  +PD  ++ S   D  I  WD ++G   +   GH   V +V F+     VAS   D++++ WD  S
Sbjct: 1084 TCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTAS 1208

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_XENTR (Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAW-----DCRSHSTEPIQIID 656
            +    D  RT    LKGH  +V    F+  G    SC  D TI+LW+      I+T   H   V  V + P+   ++S   D+ I  W+V TG  ++ F GH   V  V+ N+  +++AS   DQ++R W     +C++   E   +++
Sbjct:  136 DYETGDFERT----LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280

HSP 2 Score: 69.3218 bits (168), Expect = 2.130e-11
Identity = 31/103 (30.10%), Postives = 54/103 (52.43%), Query Frame = 3

Query:  315 GNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCR 623
            G + LS  +D+TI++W+   G+ + T   H   VR V   P    ++SC  D+ I  WD    R ++    HE  V ++ F++ +  V +   DQ+++ W+CR
Sbjct:  308 GPFLLSGSRDKTIKMWDISIGMCLMTLVGHDNWVRGVQFHPGGKFILSCADDKTIRIWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_RAT (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Rattus norvegicus GN=Pafah1b1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAW-----DCRSHSTEPIQIID 656
            +    D  RT    LKGH  +V    F+  G    SC  D TI+LW+      I+T   H   V  V + P+   ++S   D+ I  W+V TG  ++ F GH   V  V+ N+  +++AS   DQ++R W     +C++   E   +++
Sbjct:  136 DYETGDFERT----LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_PIG (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Sus scrofa GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAW-----DCRSHSTEPIQIID 656
            +    D  RT    LKGH  +V    F+  G    SC  D TI+LW+      I+T   H   V  V + P+   ++S   D+ I  W+V TG  ++ F GH   V  V+ N+  +++AS   DQ++R W     +C++   E   +++
Sbjct:  136 DYETGDFERT----LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSAARDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_PANTR (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Pan troglodytes GN=PAFAH1B1 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAW-----DCRSHSTEPIQIID 656
            +    D  RT    LKGH  +V    F+  G    SC  D TI+LW+      I+T   H   V  V + P+   ++S   D+ I  W+V TG  ++ F GH   V  V+ N+  +++AS   DQ++R W     +C++   E   +++
Sbjct:  136 DYETGDFERT----LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_MOUSE (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Mus musculus GN=Pafah1b1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAW-----DCRSHSTEPIQIID 656
            +    D  RT    LKGH  +V    F+  G    SC  D TI+LW+      I+T   H   V  V + P+   ++S   D+ I  W+V TG  ++ F GH   V  V+ N+  +++AS   DQ++R W     +C++   E   +++
Sbjct:  136 DYETGDFERT----LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280

[Close]

BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: LIS1_HUMAN (Platelet-activating factor acetylhydrolase IB subunit alpha OS=Homo sapiens GN=PAFAH1B1 PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.075e-15
Identity = 44/149 (29.53%), Postives = 71/149 (47.65%), Query Frame = 3

Query:  225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAW-----DCRSHSTEPIQIID 656
            +    D  RT    LKGH  +V    F+  G    SC  D TI+LW+      I+T   H   V  V + P+   ++S   D+ I  W+V TG  ++ F GH   V  V+ N+  +++AS   DQ++R W     +C++   E   +++
Sbjct:  136 DYETGDFERT----LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280

The following BLAST results are available for this feature:

BLAST of FC875609 vs. ExPASy Swiss-Prot

BLAST of FC875609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135


Match Name	E-value	Identity	Description
LIS1_MACFA	4.148e-15	30.20	Platelet-activating factor acetylhydrolase IB subu...	[more]
TAF5_MOUSE	5.417e-15	32.82	Transcription initiation factor TFIID subunit 5 OS...	[more]
PKWA_THECU	5.417e-15	33.10	Probable serine/threonine-protein kinase pkwA OS=T...	[more]
HETE1_PODAN	5.417e-15	31.65	Vegetative incompatibility protein HET-E-1 OS=Podo...	[more]
LIS1_XENTR	7.075e-15	29.53	Lissencephaly-1 homolog OS=Xenopus tropicalis GN=p...	[more]
LIS1_RAT	7.075e-15	29.53	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_PIG	7.075e-15	29.53	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_PANTR	7.075e-15	29.53	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_MOUSE	7.075e-15	29.53	Platelet-activating factor acetylhydrolase IB subu...	[more]
LIS1_HUMAN	7.075e-15	29.53	Platelet-activating factor acetylhydrolase IB subu...	[more]

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Properties


Property Name	Value
Genbank description	C31405G12EF CTVClemen1 Citrus clementina cDNA clone C31405G12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC875609 ID=FC875609; Name=FC875609; organism=Citrus clementina; type=EST; length=688bp
GGAGACATGACAAATCGCTATATCACTATATCAAATCAGGAACCTAAGTT
AACAATCAATGTAATCTTTGGTTTTTGCTAATAATTACATAAAGATTCAG
GGGCTCCAACTTTATTTACTGTACTTTAAAAGCAAAATAACAATAAAAGC
CCTCAATTTCGAATTGTTTATGCTTTTTCCATCGCAACGGCGCACGGTAA
CTCGTTCCCGCTCAAAGAAGCAAAGAGATGAGCGTATCCGATCTGCCGAG
GACAGAGGCTAACGTGCTCAAGGGCCACGAAGGCGCAGTTTTAGCCGCTC
GGTTCAACGGCGACGGTAATTATTGTCTGAGTTGCGGCAAGGACCGCACC
ATCCGCTTGTGGAATCCTCACCGCGGGATTCACATCAAGACCTACAAACC
CCACGGCCGCGAAGTCCGCGACGTCCACGTTACCCCAGACAACTCGAAGT
TGATATCTTGTGGCGGTGATCGGCAAATCTTTTATTGGGATGTTTCGACT
GGTCGTGTTATTCGGAAGTTTCGTGGCCACGAAAGCGAGGTGAATGCAGT
AAAGTTTAATGAGTATTCATCAGTGGTAGCATCAGCCGGCTATGATCAAT
CCTTGCGAGCTTGGGACTGTCGATCACATAGCACTGAGCCTATTCAGATT
ATTGATACTTTTCAAGACAGTGTGATGTCTGTTTGCTT