FC875609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: KTNB1_MOUSE (Katanin p80 WD40-containing subunit B1 OS=Mus musculus GN=Katnb1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 3 Query: 201 LVPAQRSKEMSVSDLPRTEA-NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 +V +S + V DL + L GH+ + + F+ G + S +D I+LW+ R + Y+ H + VR + +PD L S D + WD++ G+++ +F GH VN V+F+ ++AS D+++R WD Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: KTNB1_HUMAN (Katanin p80 WD40-containing subunit B1 OS=Homo sapiens GN=KATNB1 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.688e-14 Identity = 41/140 (29.29%), Postives = 72/140 (51.43%), Query Frame = 3 Query: 201 LVPAQRSKEMSVSDLPRTEA-NVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 +V +S + V DL + L GH+ + + F+ G + S +D I+LW+ R + Y+ H + VR + +PD L S D + WD++ G+++ +F GH VN V+F+ ++AS D+++R WD Sbjct: 78 IVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWD 217
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: NUDF_USTMA (Nuclear distribution protein PAC1 OS=Ustilago maydis GN=PAC1 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 44/139 (31.65%), Postives = 67/139 (48.20%), Query Frame = 3 Query: 225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGI-HIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTE 638 + D RT LKGH AV F+ GNY LSC D +I++W+ + +IKT + H V V P + ++S D+ I W+ STG + +GH V + ++ + + S DQ+ R WD S T+ Sbjct: 150 DWETGDFERT----LKGHTKAVQDVDFDSKGNYVLSCSSDLSIKVWDANNDYKNIKTLQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETK 284 HSP 2 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 36/105 (34.29%), Postives = 53/105 (50.48%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVA 581 L+GH+ +V + RF +Y +S +D+TI++W G KT + H VR + D L+SC D+ WDVS+G + RGHE V F +S A Sbjct: 203 LQGHDHSVSSVRFLPGDDYIVSASRDKTIKIWEFSTGFCTKTLQGHAEWVRSAIPSDDAKWLVSCSTDQTARVWDVSSGETKVELRGHEHVVEVAIFAPVASYAA 307
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: KTNB1_STRPU (Katanin p80 WD40-containing subunit B1 OS=Strongylocentrotus purpuratus GN=KATNB1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.989e-14 Identity = 39/140 (27.86%), Postives = 70/140 (50.00%), Query Frame = 3 Query: 201 LVPAQRSKEMSVSDL-PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 +V +S M + DL P L GH ++ F+ G + S D ++LW+ R I TYK H +V + +PD L++ D I WD++ G++ ++F+ H V ++F+ ++AS D++++ WD Sbjct: 74 VVAGSQSGTMKIYDLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVKLWDVRRKGCIYTYKGHSDQVNMIKFSPDGKWLVTASEDTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASGSSDRTVQFWD 213
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: NUDF_CRYNE (Nuclear distribution protein PAC1 OS=Cryptococcus neoformans GN=PAC1 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.022e-13 Identity = 45/139 (32.37%), Postives = 66/139 (47.48%), Query Frame = 3 Query: 225 EMSVSDLPRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNP-HRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTE 638 + D+ RT LKGH AV+ F+ G +C D T++LW+ ++ ++KT H V V PD L+S D+ I W VS+G I+ F GH V +E + SA DQ+ R WD + T+ Sbjct: 133 DWEAGDMERT----LKGHTKAVMDVDFDPRGGLMATCSSDLTLKLWDTANQYTNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETK 267 HSP 2 Score: 74.7146 bits (182), Expect = 5.070e-13 Identity = 41/116 (35.34%), Postives = 56/116 (48.28%), Query Frame = 3 Query: 252 TEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKF---NEYSSVVASAG 590 T L GH+ +V + RF DG +S +D+TIR+W G IKT+ H VR+ + D L+S D+ WD STG + RGHE V F N Y ++ AG Sbjct: 181 TNVKTLHGHDHSVSSVRFMPDGETLVSASRDKTIRVWQVSSGYCIKTFSGHAEWVREAVPSEDGRWLVSASNDQTSRIWDFSTGETKMELRGHEHVVECAVFAPVNAYPAIRELAG 296
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: YZLL_CAEEL (Uncharacterized WD repeat-containing protein K04G11.4 OS=Caenorhabditis elegans GN=K04G11.4 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 41/143 (28.67%), Postives = 76/143 (53.15%), Query Frame = 3 Query: 258 ANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSVMSVC 686 A + H+ ++ +F+ DG Y S D +I++W ++ KT H + + + D+ ++SC D+ + +DVS+GR ++ +GH + V FN +++AS +D+++R W R+ +T I I +D V SVC Sbjct: 100 AEIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDF-VYEKTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNT--IFSIPGHEDPVSSVC 239
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 36/125 (28.80%), Postives = 63/125 (50.40%), Query Frame = 3 Query: 249 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCR 623 R + + K H V + F+ DG + + +D++I++W+ +R + + H VR +PD ++SC D+ I WD + + + F N V FN + +ASAG DQ+++ WD R Sbjct: 92 RGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216 HSP 2 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 41/143 (28.67%), Postives = 63/143 (44.06%), Query Frame = 3 Query: 246 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSV 674 P A GH+ V + +F+ GN S +DRT+RLW P + +K H VR V + D L + D+ I W + R + H V KF+ ++ S D++++ WD T Q ++ F DSV Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-----TTNKQCVNNFSDSV 186
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 36/125 (28.80%), Postives = 63/125 (50.40%), Query Frame = 3 Query: 249 RTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCR 623 R + + K H V + F+ DG + + +D++I++W+ +R + + H VR +PD ++SC D+ I WD + + + F N V FN + +ASAG DQ+++ WD R Sbjct: 92 RGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVR 216 HSP 2 Score: 73.1738 bits (178), Expect = 1.475e-12 Identity = 41/143 (28.67%), Postives = 63/143 (44.06%), Query Frame = 3 Query: 246 PRTEANVLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRSHSTEPIQIIDTFQDSV 674 P A GH+ V + +F+ GN S +DRT+RLW P + +K H VR V + D L + D+ I W + R + H V KF+ ++ S D++++ WD T Q ++ F DSV Sbjct: 49 PHARAYRYVGHKDVVTSVQFSPHGNLLASASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWD-----TTNKQCVNNFSDSV 186
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 35/120 (29.17%), Postives = 67/120 (55.83%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 L+GH ++ +A+F+ G Y + D+T+++WN I +T H V D+ + D+ ++S D+ + +++ T R+ + +GH + V FN SS+V S +D+S+R WD ++ Sbjct: 83 LEGHTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKT 202 HSP 2 Score: 69.3218 bits (168), Expect = 2.130e-11 Identity = 37/117 (31.62%), Postives = 56/117 (47.86%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWD 617 L GH+ V ++ D +S D+T++++ KT K H V + P +S ++S D + WDV TG I+ H V+AV FN S++AS YD +R WD Sbjct: 125 LTGHKLGVNDIAWSSDSRCVVSASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWD 241
BLAST of FC875609 vs. ExPASy Swiss-Prot
Match: APAF_MOUSE (Apoptotic protease-activating factor 1 OS=Mus musculus GN=Apaf1 PE=1 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 1.334e-13 Identity = 37/122 (30.33%), Postives = 59/122 (48.36%), Query Frame = 3 Query: 267 LKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFY--WDVSTGRVIRKFRGHESEVNAVKFNEYSSVVASAGYDQSLRAWDCRS 626 +K HE VL F+ D +Y +C D+ +++W+ G + TY H +V H T ++ L+ G F WD++ GH + VN +F+ ++AS D +LR WD RS Sbjct: 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNSSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRS 774 HSP 2 Score: 71.2478 bits (173), Expect = 5.606e-12 Identity = 36/120 (30.00%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 264 VLKGHEGAVLAARFNGDGNYCLSCGKDRTIRLWNPHRGIHIKTYKPHGREVRDVHVTPDNSKLISCGGDRQIFYWDVSTGRVIRKFRGHESEVNAVKFNEYSS--VVASAGYDQSLRAWD 617 V++ H AV A F+ DG SCG D+T++++ G + K H EV + D+S + +C D+++ WD +TG+++ + H +VN F S+ ++A+ D L+ WD Sbjct: 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNSSNHLLLATGSNDFFLKLWD 729 The following BLAST results are available for this feature:
BLAST of FC875609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 135
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875609 ID=FC875609; Name=FC875609; organism=Citrus clementina; type=EST; length=688bpback to top |