FC875619

Overview
NameFC875619
Unique NameFC875619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_SULTO (NAD-dependent deacetylase OS=Sulfolobus tokodaii GN=npdA PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.555e-15
Identity = 49/125 (39.20%), Postives = 64/125 (51.20%), Query Frame = 2
Query:  335 IVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSFCRDLFQDQ 706
            I  TGAGIST  GIPD+R PNG +      +   ++F                      A PN AH+ALA LEK G I  +ITQN+D LH  AGS N +ELHG +    C++C  ++  D   D+
Sbjct:   17 IAFTGAGISTASGIPDFRGPNGLWKKYSPELATIEYFKKDPKGFWEFYRLRMRG--LFTALPNRAHYALAELEKMGLIRAIITQNIDGLHQLAGSRNVIELHGNMRKCYCVNCLKTYDSDTVLDK 139          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD1_ARCFU (NAD-dependent deacetylase 1 OS=Archaeoglobus fulgidus GN=npdA1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15
Identity = 51/133 (38.35%), Postives = 70/133 (52.63%), Query Frame = 2
Query:  293 DPPSIEDINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKP--ITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSF 682
            D   ++ I +   L+ LTGAG+S E GIP +R  +G ++  ++P  + + Q F                      AQPN AH A A LE+ G + C+ITQNVD LH RAGS N + LHG++  V C  C  SF
Sbjct:    2 DEKLLKTIAESKYLVALTGAGVSAESGIPTFRGKDGLWNR-YRPEELANPQAFAKDPEKVWKWYAWRMEKV--FNAQPNKAHQAFAELERLGVLKCLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNNSF 131          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD2_THETN (NAD-dependent deacetylase 2 OS=Thermoanaerobacter tengcongensis GN=npdA2 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.719e-15
Identity = 49/134 (36.57%), Postives = 64/134 (47.76%), Query Frame = 2
Query:  308 EDINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNPL-ELHGTVYTVVCLDCGFSFCRDLFQDQ 706
            E I    K +VLTGAGISTE GIPD+RSP         P                             A+PN AH+ L+ +EK G I  +ITQN+D LH +AGS  + E+HG      CL CG     +L +++
Sbjct:   15 ELIKSSQKTMVLTGAGISTESGIPDFRSPGTGLWENMDPTEVLSTKVLFNSPEEFYRVGFKILSSMRNAEPNEAHYILSEMEKEGIIAGVITQNIDNLHQKAGSKKVYEVHGNTREGSCLRCGEKVSFELLEEK 148          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_CALMQ (NAD-dependent deacetylase OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=npdA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14
Identity = 48/113 (42.48%), Postives = 57/113 (50.44%), Query Frame = 2
Query:  335 IVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            I  TGAGISTE GIPD+R P G +      +    +                       A+PN AH ALA LEK G I  +ITQN+D LH  AGS N +ELHG   TV C+ C
Sbjct:   24 IAFTGAGISTESGIPDFRGPQGLWRRFDPALASIDYLNTDPKGFWEFYIERFRVLN--NARPNKAHLALAELEKLGIIKYVITQNIDNLHQSAGSINVIELHGNYTTVYCMRC 134          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_CLOPE (NAD-dependent deacetylase OS=Clostridium perfringens GN=npdA PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 48/129 (37.21%), Postives = 67/129 (51.94%), Query Frame = 2
Query:  308 EDINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSG----FKP---ITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            E I     ++   GAG+STE GIPD+RS NG ++      F P   ++H  F                    +  ++PN AH ALA LE+ G++  ++TQN+D LH  AGS N  ELHG+V    C+DC
Sbjct:   10 EIIKNSNNIVFFGGAGVSTESGIPDFRSANGLFNEKLNITFTPEQLVSHSFF----ERYPEEFFNFYKAKLIYPNSKPNDAHIALAKLEEMGKLKAIVTQNIDGLHQMAGSKNVFELHGSVLRNYCVDC 134          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD2_ARCFU (NAD-dependent deacetylase 2 OS=Archaeoglobus fulgidus GN=npdA2 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.317e-14
Identity = 50/125 (40.00%), Postives = 66/125 (52.80%), Query Frame = 2
Query:  335 IVLTGAGISTECGIPDYRSPNGAYS----------SGFK--PITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            +V TGAGIS E GIP +R  +G +           SGFK  P    +F                     + A+PNPAH+A+A LE+ G +  +ITQN+D LH RAGS   LELHG++  + CLDC
Sbjct:   19 VVFTGAGISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDK--------------LFAEPNPAHYAIAELERMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDC 129          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_SULAC (NAD-dependent deacetylase OS=Sulfolobus acidocaldarius GN=npdA PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14
Identity = 47/113 (41.59%), Postives = 57/113 (50.44%), Query Frame = 2
Query:  335 IVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            I  TGAGIST  GIPD+R P G +      +   ++F                      A+PN AH+ALA LEK G I  +ITQNVD LH  AGS N +ELHG +    C  C
Sbjct:   21 IAFTGAGISTASGIPDFRGPQGLWKKYSPELASIEYFQKYPDAFWQFYSTRMKS--LFEAKPNRAHYALAQLEKMGLIKAVITQNVDGLHSVAGSRNVIELHGNMRKSYCTSC 131          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_PYRHO (NAD-dependent deacetylase OS=Pyrococcus horikoshii GN=npdA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14
Identity = 45/116 (38.79%), Postives = 60/116 (51.72%), Query Frame = 2
Query:  332 LIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGF 676
            +I  TGAGIS E GIP +R  +G +   ++P                           + A+PNPAH+AL  LEK G +  +ITQNVD LH  AG+ N +ELHG ++ V C  C F
Sbjct:   15 VIAFTGAGISAESGIPTFRGKDGLWKK-YRPEELATPEAFERNPKLVWDFYKWRIKKILKAKPNPAHYALVELEKMGILKAVITQNVDDLHREAGTKNLIELHGNIFRVRCTSCEF 129          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_PYRFU (NAD-dependent deacetylase OS=Pyrococcus furiosus GN=npdA PE=3 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14
Identity = 48/117 (41.03%), Postives = 60/117 (51.28%), Query Frame = 2
Query:  335 IVLTGAGISTECGIPDYRSPNGAYSS--GFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGF 676
            I  TGAGIS E GIP +R  +G +      +  T + F                     + A+PNPAH ALA LEK G I  +ITQNVD LH  AGS N +ELHG ++ V C  C +
Sbjct:   16 IAFTGAGISAESGIPTFRGKDGLWRKYRAEELATPEAF---KRDPKLVWEFYKWRIKKILEAKPNPAHIALAELEKMGIIKAVITQNVDDLHREAGSKNVIELHGNIFRVKCTSCSY 129          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_SYMTH (NAD-dependent deacetylase OS=Symbiobacterium thermophilum GN=npdA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.246e-14
Identity = 49/134 (36.57%), Postives = 66/134 (49.25%), Query Frame = 2
Query:  305 IEDINQFAKL-------IVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSF 682
            +E I  FA+        + LTGAG STE G+PD+RS  G +     P++                           AQPNP H  LA+L++ G +  +ITQNVD LH  AGS + +ELHG++    CL CG  F
Sbjct:    2 LEQIQDFARALQASRYAVALTGAGASTESGLPDFRSNTGLWKD-VDPVSLISMTALRRRPVDFYRFYRMRFSHLWGAQPNPVHKVLAALQREGLLKRLITQNVDGLHQAAGSPDVIELHGSLRECQCLRCGRRF 134          
The following BLAST results are available for this feature:
BLAST of FC875619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
NPD_SULTO1.555e-1539.20NAD-dependent deacetylase OS=Sulfolobus tokodaii G... [more]
NPD1_ARCFU3.465e-1538.35NAD-dependent deacetylase 1 OS=Archaeoglobus fulgi... [more]
NPD2_THETN7.719e-1536.57NAD-dependent deacetylase 2 OS=Thermoanaerobacter ... [more]
NPD_CALMQ1.008e-1442.48NAD-dependent deacetylase OS=Caldivirga maquilinge... [more]
NPD_CLOPE1.317e-1437.21NAD-dependent deacetylase OS=Clostridium perfringe... [more]
NPD2_ARCFU1.317e-1440.00NAD-dependent deacetylase 2 OS=Archaeoglobus fulgi... [more]
NPD_SULAC1.720e-1441.59NAD-dependent deacetylase OS=Sulfolobus acidocalda... [more]
NPD_PYRHO1.720e-1438.79NAD-dependent deacetylase OS=Pyrococcus horikoshii... [more]
NPD_PYRFU1.720e-1441.03NAD-dependent deacetylase OS=Pyrococcus furiosus G... [more]
NPD_SYMTH2.246e-1436.57NAD-dependent deacetylase OS=Symbiobacterium therm... [more]

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Properties
Property NameValue
Genbank descriptionC31405H11EF CTVClemen1 Citrus clementina cDNA clone C31405H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875619 ID=FC875619; Name=FC875619; organism=Citrus clementina; type=EST; length=721bp
GAAGGAAATTCATCAAAAGAATACAACTATGCTTCTGCGTTTGCCTTTTT
TCTCTGCTTCGAGAAATTCTTCTGGAATGCTTGCGAGGGTTAAGTCAGAA
ATTGTTCAATCAAGTATCAAAGCACAGCAATTGCTGAGCAAAGGAAGAAG
GGTATTCCCTCTTCAGGGTTCTGTAAAGTTTGTACAAACATCATGCCGAA
TGTCAATTCCTGGGTTACCATCATCAAGACATGAAGACAAGGCACCTGCA
TCTCCTAAAGTTTTGAGGGACAAGAAGGCAGTTCCTGATGCAGACCCTCC
AAGCATTGAAGACATCAATCAATTTGCCAAGCTCATTGTATTGACAGGAG
CTGGAATTAGCACAGAATGTGGAATTCCTGATTATAGAAGTCCGAATGGA
GCTTACAGTTCTGGATTTAAACCAATTACCCATCAGCAATTTTTTCGTTC
AAGTCGAGCTCGTAGACGGTATTGGGCTAGAAGCTATGCTGGATGGAGAC
GGTTTATGGCAGCACAGCCTAATCCAGCTCATTTTGCTTTAGCATCTCTT
GAAAAAGCTGGGAGGATAGATTGTATGATTACTCAAAATGTCGACAGATT
ACATCATCGTGCAGGGAGCAATCCACTCGAATTACATGGGACTGTATATA
CTGTTGTTTGTTTAGATTGTGGTTTTTCCTTTTGTCGGGATTTGTTTCAA
GACCAGTGAAAGCCCTTAATC
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