FC875619

Overview
NameFC875619
Unique NameFC875619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_HALMA (NAD-dependent deacetylase OS=Haloarcula marismortui GN=npdA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 46/141 (32.62%), Postives = 71/141 (50.35%), Query Frame = 2
Query:  269 DKKAVPDADPPSIEDINQFAKL----IVLTGAGISTECGIPDYRSPNGAYSSGFKPITH-QQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSN-PLELHGTVYTVVCLDCG 673
            D+  + D D  +++ + +  +     + LTGAG+ST  GIP +R  +G +        H ++                      +  +PN AH ALA+LE  G +D ++TQN+D LH  AG++  +ELHGT   VVC DCG
Sbjct:    4 DRHGIDDIDGETLDAVAEALRTAETAVALTGAGVSTASGIPSFRGDDGIWERHDPADFHRRRLDADPAGFWADRLSLREAIYGDIDPEPNAAHEALAALEADGHLDAVLTQNIDGLHDAAGTDRVVELHGTHRRVVCDDCG 144          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_THESM (NAD-dependent deacetylase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=npdA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 43/117 (36.75%), Postives = 58/117 (49.57%), Query Frame = 2
Query:  332 LIVLTGAGISTECGIPDYRSPNGAYSS-GFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNPL-ELHGTVYTVVCLDCGF 676
            LI  TGAG+S E GIP +R   G + +   + +   + F                      A+PN AH ALA LEK G +  +ITQN+D LH  AG+  + ELHG +Y V C  C +
Sbjct:   15 LIAFTGAGVSAESGIPTFRDRGGLWENYRIEEVATPEAFRKDPNLVWSFYKMRMKI--MKGAKPNNAHLALAELEKMGILKAVITQNIDNLHREAGNQHIVELHGNIYRVKCTRCDY 129          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_METKA (NAD-dependent deacetylase OS=Methanopyrus kandleri GN=npdA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 2
Query:  308 EDINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSFCRD 691
            E + +   ++VLTGAG S + GIP +R  +G ++  + P                             A+PNPAH  LA +E+ G ++ +ITQNVD LH RAGS   +ELHG ++   C+ C +    D
Sbjct:    8 ERVVEAETVVVLTGAGASADSGIPTFRGKDGLWNK-YDPRELATPEAFARDPEKVWEWYLWRRRKIAEAEPNPAHTVLARMERDGLLEAVITQNVDGLHQRAGSRRVIELHGNIWRDECVSCEYQRVND 135          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_BACCR (NAD-dependent deacetylase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=npdA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 2
Query:  329 KLIVLTGAGISTECGIPDYRSPNGAYS-SGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            K+ VLTGAG STE GIPD+RS NG Y+ +  +    + ++                   F   +PN  H  LA LE+ G+   ++TQN+D LH   GS + ++LHGT+ T  C  C
Sbjct:   19 KITVLTGAGASTESGIPDFRSANGLYADANVEMYLSRGYYNRSPKEFWKHYKEIFQINTFHQYKPNRGHRFLAELEEQGKDITILTQNIDGLHQLGGSKHVIDLHGTLQTAHCPKC 134          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_BACC1 (NAD-dependent deacetylase OS=Bacillus cereus (strain ATCC 10987) GN=npdA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 2
Query:  329 KLIVLTGAGISTECGIPDYRSPNGAYS-SGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            K+ VLTGAG STE GIPD+RS NG Y+ +  +    + ++                   F   +PN  H  LA LE+ G+   ++TQN+D LH   GS + ++LHGT+ T  C  C
Sbjct:   16 KITVLTGAGASTESGIPDFRSANGLYADANVEMYLSRGYYNRSPKEFWKHYKEIFQINTFHQYKPNRGHRFLAELEEQGKDITILTQNIDGLHQLGGSKHVIDLHGTLQTAHCPKC 131          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_BACAN (NAD-dependent deacetylase OS=Bacillus anthracis GN=npdA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13
Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 2
Query:  329 KLIVLTGAGISTECGIPDYRSPNGAYS-SGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSF 682
            K+ VLTGAG STE GIPD+RS NG Y+ +  +    + ++                   F   +PN  H  LA LE+ G+   ++TQN+D LH   GS + ++LHGT+ T  C  C   +
Sbjct:   16 KITVLTGAGASTESGIPDFRSANGLYADANVEMYLSRGYYNRSPKEFWKHYKEIFQINTFHQYKPNRGHRFLAELEEQGKDITILTQNIDGLHQVGGSKHVIDLHGTLQTAHCPKCKMGY 135          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_BACCZ (NAD-dependent deacetylase OS=Bacillus cereus (strain ZK / E33L) GN=npdA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12
Identity = 43/116 (37.07%), Postives = 61/116 (52.59%), Query Frame = 2
Query:  329 KLIVLTGAGISTECGIPDYRSPNGAYS-SGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDC 670
            K+ VLTGAG STE GIPD+RS NG Y+ +  +    + ++                   F   +PN  H  LA LE+ G+   ++TQN+D LH   GS + ++LHGT+ T  C  C
Sbjct:   19 KITVLTGAGASTESGIPDFRSANGLYADANVEMYLSRGYYNRSPKEFWKHYKEIFQINTFHQYKPNRGHRFLAELEEQGKDITILTQNIDGLHQVGGSKHVIDLHGTLQTAHCPKC 134          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_AERPE (NAD-dependent deacetylase OS=Aeropyrum pernix GN=npdA PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12
Identity = 47/114 (41.23%), Postives = 56/114 (49.12%), Query Frame = 2
Query:  335 IVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCG 673
            +  TGAGIS E GIP +R  +G +S  F P                           +AA+PN AH  LA LE +G +  +ITQNVD LH RAGS   LELHG V    C  CG
Sbjct:   18 VAFTGAGISAESGIPTFRGKDGLWSR-FDPRDLATPEAFNRDPRLVWEWYSWRIERVLAAKPNKAHRLLARLEDSGVLKAVITQNVDGLHRRAGSRRVLELHGNVLRARCTRCG 130          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_AQUAE (NAD-dependent deacetylase OS=Aquifex aeolicus GN=npdA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 46/118 (38.98%), Postives = 61/118 (51.69%), Query Frame = 2
Query:  332 LIVLTGAGISTECGIPDYRSPNGAYSSGFKP---ITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDCG 673
            ++ LTGAGIS E GIP +R  +G ++  FKP    T + FF                      AQPN  H  L  +E+      +ITQNVD LH RAGS   +ELHG ++ V C++CG
Sbjct:    6 IVTLTGAGISAESGIPTFRGKDGLWNK-FKPEELATPEAFFRNPKLVWEWYDWKRQL---IAKAQPNEGHKILTKMEEEFPNFYLITQNVDGLHQRAGSKKVIELHGNIWKVRCVECG 119          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_TREDE (NAD-dependent deacetylase OS=Treponema denticola GN=npdA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 43/126 (34.13%), Postives = 63/126 (50.00%), Query Frame = 2
Query:  311 DINQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPA--HFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFS 679
            +I +   L+  TGAGIST  GI D+R  +G Y    +P T + F                    +   +  PA  H  LA LEK G +  +ITQN+D LH +AGS N +E+HG+     C++C ++
Sbjct:   14 EITKARHLVAFTGAGISTLAGIKDFRGKDGLYK---QPNTEKMFDIDVFYRDPSVYYGMAKEFIYGLEEKQPAIVHTVLADLEKRGILKAVITQNIDLLHQKAGSKNVIEVHGSPSVHYCINCSYT 136          
The following BLAST results are available for this feature:
BLAST of FC875619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
NPD_HALMA7.225e-1332.62NAD-dependent deacetylase OS=Haloarcula marismortu... [more]
NPD_THESM9.436e-1336.75NAD-dependent deacetylase OS=Thermococcus sibiricu... [more]
NPD_METKA9.436e-1333.33NAD-dependent deacetylase OS=Methanopyrus kandleri... [more]
NPD_BACCR9.436e-1337.07NAD-dependent deacetylase OS=Bacillus cereus (stra... [more]
NPD_BACC19.436e-1337.07NAD-dependent deacetylase OS=Bacillus cereus (stra... [more]
NPD_BACAN9.436e-1335.83NAD-dependent deacetylase OS=Bacillus anthracis GN... [more]
NPD_BACCZ1.232e-1237.07NAD-dependent deacetylase OS=Bacillus cereus (stra... [more]
NPD_AERPE1.609e-1241.23NAD-dependent deacetylase OS=Aeropyrum pernix GN=n... [more]
NPD_AQUAE2.102e-1238.98NAD-dependent deacetylase OS=Aquifex aeolicus GN=n... [more]
NPD_TREDE6.116e-1234.13NAD-dependent deacetylase OS=Treponema denticola G... [more]

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Properties
Property NameValue
Genbank descriptionC31405H11EF CTVClemen1 Citrus clementina cDNA clone C31405H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875619 ID=FC875619; Name=FC875619; organism=Citrus clementina; type=EST; length=721bp
GAAGGAAATTCATCAAAAGAATACAACTATGCTTCTGCGTTTGCCTTTTT
TCTCTGCTTCGAGAAATTCTTCTGGAATGCTTGCGAGGGTTAAGTCAGAA
ATTGTTCAATCAAGTATCAAAGCACAGCAATTGCTGAGCAAAGGAAGAAG
GGTATTCCCTCTTCAGGGTTCTGTAAAGTTTGTACAAACATCATGCCGAA
TGTCAATTCCTGGGTTACCATCATCAAGACATGAAGACAAGGCACCTGCA
TCTCCTAAAGTTTTGAGGGACAAGAAGGCAGTTCCTGATGCAGACCCTCC
AAGCATTGAAGACATCAATCAATTTGCCAAGCTCATTGTATTGACAGGAG
CTGGAATTAGCACAGAATGTGGAATTCCTGATTATAGAAGTCCGAATGGA
GCTTACAGTTCTGGATTTAAACCAATTACCCATCAGCAATTTTTTCGTTC
AAGTCGAGCTCGTAGACGGTATTGGGCTAGAAGCTATGCTGGATGGAGAC
GGTTTATGGCAGCACAGCCTAATCCAGCTCATTTTGCTTTAGCATCTCTT
GAAAAAGCTGGGAGGATAGATTGTATGATTACTCAAAATGTCGACAGATT
ACATCATCGTGCAGGGAGCAATCCACTCGAATTACATGGGACTGTATATA
CTGTTGTTTGTTTAGATTGTGGTTTTTCCTTTTGTCGGGATTTGTTTCAA
GACCAGTGAAAGCCCTTAATC
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