FC875619

Overview
NameFC875619
Unique NameFC875619
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length721
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: SIRT6_MOUSE (NAD-dependent deacetylase sirtuin-6 OS=Mus musculus GN=Sirt6 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11
Identity = 40/127 (31.50%), Postives = 61/127 (48.03%), Query Frame = 2
Query:  320 QFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAG---SNPLELHGTVYTVVCLDCGFSFCRD 691
            Q + ++  TGAGIST  GIPD+R P+G ++   + +  +                      F  A+P+  H AL  LE+ G +  +++QNVD LH R+G       ELHG ++   C  C   + RD
Sbjct:   43 QSSSVVFHTGAGISTASGIPDFRGPHGVWTMEERGLAPK------------------FDTTFENARPSKTHMALVQLERMGFLSFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECPKCKTQYVRD 151          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_DESOH (NAD-dependent deacetylase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=npdA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11
Identity = 41/120 (34.17%), Postives = 55/120 (45.83%), Query Frame = 2
Query:  326 AKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPI----THQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGSNP-LELHGTVYTVVCLDC 670
            ++  V +GAG+S E GIP +R P G +     P     T                        F AA PNP H AL  LE+ G +  +ITQN+D LH  AG+   +E+HG  +   CL C
Sbjct:   18 SRAAVFSGAGVSAESGIPTFRDPGGVWDR-LNPAEVGDTQGLLASLEKNPEKLVAMFMELLAVFDAAIPNPGHRALFDLERMGILQAVITQNIDNLHQEAGNTQVIEMHGNGFRFRCLKC 136          
BLAST of FC875619 vs. ExPASy Swiss-Prot
Match: NPD_BACSK (NAD-dependent deacetylase OS=Bacillus clausii (strain KSM-K16) GN=npdA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11
Identity = 40/131 (30.53%), Postives = 61/131 (46.56%), Query Frame = 2
Query:  314 INQFAKLIVLTGAGISTECGIPDYRSPNGAYSSGFKPITHQQFFXXXXXXXXXXXXXXXXXXXFMAAQPNPAHFALASLEKAGRIDCMITQNVDRLHHRAGS-NPLELHGTVYTVVCLDCGFSFCRDLFQD 703
            + Q  +++V TGAG+STE G+PD+RS  G    G  P                              QP+  +  LA+ E+   +  +ITQN D LH RAG+   L LHG++  + C+ CG  +  D + +
Sbjct:    6 LRQAQRIVVFTGAGMSTESGVPDFRSSRG-LCKGNNPEALASLQAMNDNREAFVDFYRRRMEQLQHVQPHKGYDVLATWEQQLSVTAIITQNTDGLHERAGNQRVLPLHGSIQKLYCIQCGQHYDVDRYMN 135          
The following BLAST results are available for this feature:
BLAST of FC875619 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
SIRT6_MOUSE8.832e-1131.50NAD-dependent deacetylase sirtuin-6 OS=Mus musculu... [more]
NPD_DESOH8.832e-1134.17NAD-dependent deacetylase OS=Desulfococcus oleovor... [more]
NPD_BACSK8.832e-1130.53NAD-dependent deacetylase OS=Bacillus clausii (str... [more]

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Properties
Property NameValue
Genbank descriptionC31405H11EF CTVClemen1 Citrus clementina cDNA clone C31405H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875619 ID=FC875619; Name=FC875619; organism=Citrus clementina; type=EST; length=721bp
GAAGGAAATTCATCAAAAGAATACAACTATGCTTCTGCGTTTGCCTTTTT
TCTCTGCTTCGAGAAATTCTTCTGGAATGCTTGCGAGGGTTAAGTCAGAA
ATTGTTCAATCAAGTATCAAAGCACAGCAATTGCTGAGCAAAGGAAGAAG
GGTATTCCCTCTTCAGGGTTCTGTAAAGTTTGTACAAACATCATGCCGAA
TGTCAATTCCTGGGTTACCATCATCAAGACATGAAGACAAGGCACCTGCA
TCTCCTAAAGTTTTGAGGGACAAGAAGGCAGTTCCTGATGCAGACCCTCC
AAGCATTGAAGACATCAATCAATTTGCCAAGCTCATTGTATTGACAGGAG
CTGGAATTAGCACAGAATGTGGAATTCCTGATTATAGAAGTCCGAATGGA
GCTTACAGTTCTGGATTTAAACCAATTACCCATCAGCAATTTTTTCGTTC
AAGTCGAGCTCGTAGACGGTATTGGGCTAGAAGCTATGCTGGATGGAGAC
GGTTTATGGCAGCACAGCCTAATCCAGCTCATTTTGCTTTAGCATCTCTT
GAAAAAGCTGGGAGGATAGATTGTATGATTACTCAAAATGTCGACAGATT
ACATCATCGTGCAGGGAGCAATCCACTCGAATTACATGGGACTGTATATA
CTGTTGTTTGTTTAGATTGTGGTTTTTCCTTTTGTCGGGATTTGTTTCAA
GACCAGTGAAAGCCCTTAATC
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