FC875622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28 Identity = 68/208 (32.69%), Postives = 119/208 (57.21%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGG-------VRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQIS 729 S+Y + TFSP G+L Q+E+A+ A+ G T++GI GVV+A EK++ S L+ S+V KI + +IG SG+ D R L+ ++R + + + +Y E + + + + + +F SG RPFGV++L AG + PQL+ +DPSG++ A A+G A+ L+ + ++ LD+A+ ++ TLK+ E +++ Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDKHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMSRPFGVAILFAGIEAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDISLNTLKQVMEEKLN 213
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA1_DICDI (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum GN=psmA1 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.192e-28 Identity = 71/196 (36.22%), Postives = 113/196 (57.65%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY--VEEMELDDAVHTAILTLKE 708 +QY +TTFSPSG++ QIE+A+ AV G ++ +K+ V+ + K+ S L S KI + ++G+ SG+ D R+L R + Y+ +Y+ + V +LV + A Q TQ G RP+GV LLVAGYD G +YQ PSG+++ +K+ ++G +AKT+LEK + EE L+ + + L+E Sbjct: 4 NQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSEL--GSYQKKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHTQRYGRRPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFEECTLEQLITHGLRALRE 197
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.883e-28 Identity = 74/205 (36.10%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 118 MGDSQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY--VEEMELDDAVHTAILTLKEGFEGQI 726 M +QY TT+SP+G+L Q+E+A AV +G ++G+K ++ VV+ K+ P + S K L ++G+ SG+ D R L R R + Y ++ P+ L A Q Q G RPFGV LL+AGYD +GP+LYQ PSG F +KA+AMG A+T+LE+ + +LD+ V A+ L G + Sbjct: 1 MFKNQYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKRNP-VSGLSSYQEKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQGPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGFPACDLDELVMHALRALGAATSGGV 204
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.883e-28 Identity = 72/201 (35.82%), Postives = 111/201 (55.22%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY--VEEMELDDAVHTAILTLKEGFEGQ 723 +QY +TT+SP+G+L Q+E+A+ AV G +G+++ V+A K S L S K+ + + GV +G+ D RVL R R + + +Y P+PV++L A Q TQ RP+GV LLVAG D+ G LY PSG+YF ++A A+G AKTFLE+R+ + + + A+ +KE +G+ Sbjct: 4 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQGE 202
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA3_SCHPO (Probable proteasome subunit alpha type-3 OS=Schizosaccharomyces pombe GN=SPCC1795.04c PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.329e-28 Identity = 68/179 (37.99%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 154 FSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTA 690 FSP G+L Q E+A AV + T +GIK +GV++A EK + S L+ ++I S+ +IG+ +G PD + +V+++R +A + Y PIP T + +Q FT VRPFGV VA YD +GP LY V+P+G Y+ + +A GK A+ LEK +++ DAV A Sbjct: 14 FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNNRIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVRPFGVMSFVATYDSEGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEA 192
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27 Identity = 64/197 (32.49%), Postives = 113/197 (57.36%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYV--EEMELDDAVHTAILTLKE 708 S+Y +LT FSP G L+Q+E+A AV G T++G++ +N VV+ EK S + ++ +V KI L ++ + ++G+ D R+L+ + + + + + ++ + + + R A + Q++TQ G RPFG+S L+ G D D +L+ +PSG + +KA+A G+ + + F EK Y E DA+ A+ L E Sbjct: 3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLE 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA3_ACACA (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27 Identity = 67/186 (36.02%), Postives = 105/186 (56.45%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTA 690 Y S TTFSP G++ Q+E+A AV + T+LG++ +GVV+A EK L S ++ ++ +I ++ + G+ SG+ D R LV + R +A Y Y I L + +Q ++ G VRPFG S+++ D GPQLY ++PSG + + A+GK AKT +EK + EM +A+ A Sbjct: 6 YDLSSTTFSPDGRVFQVEYAAKAVDNSGTALGLRVKDGVVLAVEKLLVSKMLVPNTNRRIHTVDRHCGLAMSGLVADGRQLVSRGRAEATSYREFYGTDISGKVLNERLSNFVQLYSLYGSVRPFGTSVILGCVDKNGPQLYMIEPSGISWGYFGVAIGKGARAAKTEIEKLKLSEMTAREAIKEA 191
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.165e-27 Identity = 69/196 (35.20%), Postives = 111/196 (56.63%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEME--LDDAVHTAILTLKE 708 +QY +T +SP G++ QIE+A+ AV G ++G+K+ V+ K+ S L KI + +IG+ +G+ D R+L R++ ++ P+PV++LV + Q TQ G RP+GV LL+AGYDD GP ++Q PS +YF +A ++G +A+T+LE+ E ME LD+ V + L+E Sbjct: 4 NQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQK--KILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRE 197
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27 Identity = 70/195 (35.90%), Postives = 114/195 (58.46%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGS-GQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMEL--DDAVHTAILTLK 705 Y +T FSP G+L Q+E+A AV S G TS+G++ + V + T+KK+P L+D +SV + +T IG++ +G+ D R LV ++R +A ++ + +PV L + A Q +TQ +RP GV +V GYD +K QL++ DP+G +F KA++ G A FLEK+ ++ + ++ V AI L+ Sbjct: 9 YDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQ 203
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27 Identity = 68/209 (32.54%), Postives = 112/209 (53.59%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGG------VRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 S+Y ++TFSP G+L Q+E++L A+ G T++GI GVV+ EK+ S L++ S+ KI + +IG SG+ D R ++ +R A ++ Y E I V L + + F + RPFGV+LL+AG+D D G QL+ +PSG+++ + A A+G A+ L + + L +A + LK+ E ++ E Sbjct: 6 SEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELLVLKILKQVMEEKLDE 214 The following BLAST results are available for this feature:
BLAST of FC875622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875622 ID=FC875622; Name=FC875622; organism=Citrus clementina; type=EST; length=740bpback to top |