FC875622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA3_CAEEL (Proteasome subunit alpha type-3 OS=Caenorhabditis elegans GN=pas-7 PE=1 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.522e-21 Identity = 58/187 (31.02%), Postives = 105/187 (56.15%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTA 690 Y + +TFSP G++ Q+E+A AV + T + I+ NGVV+ +K + S L +++ ++ ++ N+GV +G PD L + +A ++ + Y+EP+P+ + A + T G RPFG ++ + G +L+ V+PSG + +KA A+GK+ AK +EK +EE++++ V A Sbjct: 8 YDLAASTFSPDGRIFQVEYAQKAVDNAGTMIAIRGKNGVVVVADKLISSKLYTDNANPRMFNVNDNVGVAVAGNYPDGFALKNYAYGEAMKWLKDYREPMPIQNIANSVAEYIHIHT-LGISRPFGAGAFFMSWNKQTGGRLFLVEPSGLNYEYKAWAVGKHRQAAKAEIEKLKIEELDVNQLVKEA 193
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.862e-21 Identity = 56/175 (32.00%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRY 651 Y +T FSP G+L Q+E+A A SL ++ + V+ ++KK+P L+D ++V I ++ IG+V +G PD R +++ +A ++ Y +P L + A + Q +TQ +RP GV L D++ GP +Y+ DP+G Y +KA+A G T LE + Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHF 186
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.090e-19 Identity = 57/182 (31.32%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELD 672 + Y TFSP+G+L Q+E+AL A+ G ++G++++ V+ K+ L S KI ++G+ +G+ PD RVL R+Q ++ + V + Q+ TQS G RP+GV LL+ GYD G L + PSG+ +A+G AKT+LE+ +++D Sbjct: 4 NNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADEL--SSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKID 183
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.056e-18 Identity = 58/175 (33.14%), Postives = 94/175 (53.71%), Query Frame = 1 Query: 145 LTTFSPSGKLVQIEHALTAVG-SGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGY---DDKG---PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKR 648 +T FSP G L Q+E+A AV +G ++ I+ + V++ T+ +P L+ ++ + ++ N GV +G PD + LV+K+R +A +Y Y P+ V+ L + + Q TQ G+R G + G D+ G PQ+Y VDP+G + A A+GK A FLEK+ Sbjct: 10 ITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGG-AAVHACAVGKKQIEACAFLEKK 183
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA4_ENCCU (Probable proteasome subunit alpha type-4 OS=Encephalitozoon cuniculi GN=PRE9 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16 Identity = 59/177 (33.33%), Postives = 84/177 (47.46%), Query Frame = 1 Query: 151 TFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVE-EMELDDA 678 TF+ G+L Q+E A+ V T +G S+GVV+ K P+ + KI L+ +I V G+ D L R +R +A++ + P+T L + Q FTQ G RPFGVS L AG D L DPSG+ WK G+N L+ + E EM++ A Sbjct: 10 TFTDEGRLPQVEFAIKNVSRAGTIIGYVCSDGVVLMGVNKEPT----NGPMEKIYQLSDSIYCVLCGLFGDAMELKRYARIKAQEVLERFGVECPLTTLCKFVGQRKQAFTQYAGTRPFGVSFLYAGVIDGKYALMSTDPSGTSNRWKGMCYGENEEAINRGLKNDFPEDEMDMKTA 182
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA3_ENCCU (Probable proteasome subunit alpha type-3 OS=Encephalitozoon cuniculi GN=PRE10 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.242e-14 Identity = 56/186 (30.11%), Postives = 87/186 (46.77%), Query Frame = 1 Query: 148 TTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPD-FRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 T ++ +G++ Q+ +A A SG T +G+K+ +GVV+ EK S L S KI+ + IGVV +GM D F V ++P P V + FT+ +R G + L + Y D L D SG S+KA+ +GK KT LEK ++ M +++ V + L Sbjct: 8 TIYTTTGQIDQLSYAQKAADSGDTCIGMKSKHGVVLLAEKPRVSPLYILESDEKIRKIGNTIGVVCTGMSSDTFYVGCAIKDYVFHHKENFNEDPTPGMMKV-YLNDIFHYFTRGINLRVLGANTLTSVYKDGSFSLLHTDCSGKTLSYKAACIGKGTRRIKTELEKLDIDTMTIEEMVDVGVKVL 192
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.525e-13 Identity = 51/170 (30.00%), Postives = 79/170 (46.47%), Query Frame = 1 Query: 211 GQTSLGIKASNGVVIATEKKLP-SILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 G T++GI +GVV ATE++ L+ + KI + +I +G D + L++ + +A Y E I + AA+ S PF V L+ G D+ G ++Y +DPSG K + G A LE RY +E+ +D+AV AI +K E Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISI----EAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAME 174 The following BLAST results are available for this feature:
BLAST of FC875622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875622 ID=FC875622; Name=FC875622; organism=Citrus clementina; type=EST; length=740bpback to top |