FC875622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.258e-40 Identity = 83/195 (42.56%), Postives = 125/195 (64.10%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 Y ++T FSP G+L Q+ +A AV G T++G+K GVV+A EK++ S L++ SS KI + +I SG+ D RVLV ++R +A+ Y Y EP+P+T LV++ + Q TQ GGVRPFG +LL+AG +DK P+LY+ DPSG+YF W+A A+G + A E Y ++++++ A+ AIL L + E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDDLDMEGAIKLAILALAKTLE 203
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.561e-40 Identity = 83/195 (42.56%), Postives = 126/195 (64.62%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 Y ++T FSP G+L Q+ +A AV G T++G+K GVV+A EK++ S L++ SS KI + +I SG+ D RVLV ++R +A+ Y Y EP+P+T LV++ + Q TQ GGVRPFG +LL+AG ++K P+LY+ DPSG+YF WKA A+G + A E+ Y ++++++ A+ AIL L + E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDDIDMEGAIKLAILALAKTLE 203
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.263e-40 Identity = 85/200 (42.50%), Postives = 128/200 (64.00%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 Y ++T FSP G+L Q+ +A AV G T++G+K +GVV+A EK++ S L++ SS KI + +I SG+ D RVLV ++R +A+ Y Y EP+P+T LV++ + Q TQ GGVRPFG +LL+AG ++K P+L++ DPSG+YF WKA A+G + A E+ Y +++ DDA+ AIL L + E +E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAE 208
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.263e-40 Identity = 85/200 (42.50%), Postives = 128/200 (64.00%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 Y ++T FSP G+L Q+ +A AV G T++G+K +GVV+A EK++ S L++ SS KI + +I SG+ D RVLV ++R +A+ Y Y EP+P+T LV++ + Q TQ GGVRPFG +LL+AG ++K P+L++ DPSG+YF WKA A+G + A E+ Y +++ DDA+ AIL L + E +E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDDIGKDDAIKLAILALAKTLEEPTAE 208
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 1.239e-39 Identity = 83/200 (41.50%), Postives = 126/200 (63.00%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 Y ++T FSP G+L Q+ +A AV G T++G+K +GVV+A EK++ S L++ S KI + +I SG+ D RVLV ++R +A+ + Y EP P+ +V++ + Q TQ GGVRPFG +LL+AG +DK P+LY+ DPSG+YF+WKA A+G + A E +Y ++M LD+A+ AI L + E +E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTMEKPSAE 208
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 2.113e-39 Identity = 85/207 (41.06%), Postives = 129/207 (62.32%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGG-----VRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 ++Y + TFSP G++ QIE+A+ A+ G TSLGI+ + V+IA EK++PS LVD SSV+KI + +IG V SGM D R+LV +R +A+ + Y EP+ V T + +F +SGG RPFGVSLL+AG D+ GPQL+Q DPSG+Y + A A+G A+T +RY M +++A + + L++ E ++++ Sbjct: 6 TEYDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVADARILVDHARVEAQNHRFTYDEPMSVESCALATCDLSVQFGESGGRKKLMSRPFGVSLLIAGVDENGPQLWQTDPSGTYTRYDAQAIGGGAEAAQTVFSERYHRNMTVEEAENLTVQILRQVMEEKLTK 212
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.605e-39 Identity = 81/200 (40.50%), Postives = 127/200 (63.50%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISE 732 Y ++T FSP G+L Q+ +A AV G T++G+K + GVV+A EK++ S L++ S KI + +I SG+ D RVLV ++R +A+ + Y EP P+ +V++ + Q TQ GGVRPFG +LL+AG ++K P+LY+ DPSG+YF+WKA A+G + A E++Y ++M L++A+ AI L + E +E Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTMEKPSAE 208
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38 Identity = 77/190 (40.53%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y ++T FSP G L Q+++A AV G T++GIK+ +GVVIA+EK+ L+D S+ K+ + ++G ++G+ D RVL+ +R A Q+ +Y EP+ + L + A V Q +TQ GGVRPFGV+L++AG D P+LY +PSG Y ++A A+G+ A FLEK Y E++ ++D + A+ L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKAL 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38 Identity = 77/190 (40.53%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y ++T FSP G L Q+++A AV G T++GIK+ +GVVIA+EK+ L+D S+ K+ + ++G ++G+ D RVL+ +R A Q+ +Y EP+ + L + A V Q +TQ GGVRPFGV+L++AG D P+LY +PSG Y ++A A+G+ A FLEK Y E++ ++D + A+ L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKAL 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.336e-38 Identity = 77/190 (40.53%), Postives = 120/190 (63.16%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y ++T FSP G L Q+++A AV G T++GIK+ +GVVIA+EK+ L+D S+ K+ + ++G ++G+ D RVL+ +R A Q+ +Y EP+ + L + A V Q +TQ GGVRPFGV+L++AG D P+LY +PSG Y ++A A+G+ A FLEK Y E++ ++D + A+ L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSGVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLTIEDTILLALKAL 199 The following BLAST results are available for this feature:
BLAST of FC875622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875622 ID=FC875622; Name=FC875622; organism=Citrus clementina; type=EST; length=740bpback to top |