FC875622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 3.374e-37 Identity = 76/192 (39.58%), Postives = 122/192 (63.54%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLK 705 Y ++T FSP G L Q+E+A AV G T++G++ + VV+ EKK + L DE +V KI +L N+ + ++G+ D R+++ ++R + + + ++P+ V + R A++ Q +TQS G RPFG+S L+ G+D D P+LYQ DPSG+Y +WKA+A+G+ + + FLEK Y DDA+ T LT+K Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT-----DDAIETDDLTIK 189
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.516e-37 Identity = 75/190 (39.47%), Postives = 119/190 (62.63%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y +T FSP G+L Q+E+A AV G S+GI+ +G+V+A +K+ S L++ +SV KI ++G+ +G D R L+ +RRQA+ Y EP+ + L + +Q++TQ GG RPFGV+LL+ G +D P+LY+ DPSG+ + WKA ++G + S+ + LE+ Y EE+ LD+ V A+ T+ Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAGHVADARQLIDFARRQAQVNRLRYGEPVGIETLTKNVTDNIQQYTQVGGARPFGVALLIGGIEDGSPRLYETDPSGTPYEWKAVSIGADRSDLQEHLEENYTEELSLDEGVGLALRTI 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7B_ARATH (Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2 PE=1 SV=2) HSP 1 Score: 154.066 bits (388), Expect = 7.516e-37 Identity = 80/199 (40.20%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD--DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 ++Y ++T FSP G L Q+E+AL AV G ++G++ ++ VV+A EKK L D S KI SL +I + +G+ D RVL+ K+R + + + ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D + P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y +E + + AI L E E Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNY-KESSGQETIKLAIRALLEVVE 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.817e-37 Identity = 74/190 (38.95%), Postives = 119/190 (62.63%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTL 702 Y ++T FSP G L Q+++A AV G T++GIK+ + VVIA+EK+ L+D S+ K+ + ++G ++G+ D RVL+ +R A Q+ +Y EP+ + L + A V Q +TQ GGVRPFGV+L++AG D P+L+ +PSG Y ++A A+G+ A FLEK Y E++ +++ + A+ L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKEDLNVEETILLALKAL 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 9.817e-37 Identity = 75/192 (39.06%), Postives = 122/192 (63.54%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLK 705 Y ++T FSP G L Q+E+A AV G T++G++ + VV+ EKK + L DE +V KI +L N+ + ++G+ D R+++ ++R + + + ++P+ V + R A++ Q +TQS G RPFG+S L+ G+D D P+LYQ DPSG+Y +WKA+A+G+ + + FLEK Y D+A+ T LT+K Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT-----DEAIETDDLTIK 189
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36 Identity = 75/192 (39.06%), Postives = 122/192 (63.54%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLK 705 Y ++T FSP G L Q+E+A AV G T++G++ + VV+ EKK + L DE +V KI +L N+ + ++G+ D R+++ ++R + + + ++P+ V + R A++ Q +TQS G RPFG+S L+ G+D D P+LYQ DPSG+Y +WKA+A+G+ + + FLEK Y D+A+ T LT+K Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYT-----DEAIETDDLTIK 189
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36 Identity = 75/192 (39.06%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLK 705 Y ++T FSP G L Q+E+A AV G T++G++ VV+ EKK + L DE +V KI +L N+ + ++G+ D R+++ ++R + + + ++P+ V + R A++ Q +TQS G RPFG+S L+ G+D D P+LYQ DPSG+Y +WKA+A+G+ + + FLEK Y D+A+ T LT+K Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYT-----DEAIETDDLTIK 189
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36 Identity = 75/192 (39.06%), Postives = 121/192 (63.02%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLK 705 Y ++T FSP G L Q+E+A AV G T++G++ VV+ EKK + L DE +V KI +L N+ + ++G+ D R+++ ++R + + + ++P+ V + R A++ Q +TQS G RPFG+S L+ G+D D P+LYQ DPSG+Y +WKA+A+G+ + + FLEK Y D+A+ T LT+K Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYT-----DEAIETDDLTIK 189
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.282e-36 Identity = 81/199 (40.70%), Postives = 124/199 (62.31%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYD--DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 ++Y ++T FSP G L Q+E+AL AV G ++G++ ++ VV+A EKK L D S KI SL +I + +G+ D RVL+ K+R + + + ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D + P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y +E + V AI L E E Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTVVLAVEKKSTPKLQDSRSARKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNY-KESAGQETVKLAIRALLEVVE 199
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.187e-36 Identity = 80/199 (40.20%), Postives = 123/199 (61.81%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKG--PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 ++Y ++T FSP G L Q+E+A+ AV G ++G++ ++ VV+ EKK L D SV KI +L +I + +G+ D RVLV K+R + + + ++P+ V + R A + Q++TQSGGVRPFG+S L+ G+D P LYQ DPSG++ +WKA+A G+N ++ + FLEK Y +E + V AI L E E Sbjct: 2 ARYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNY-KETSGQETVKLAIRALLEVVE 199 The following BLAST results are available for this feature:
BLAST of FC875622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875622 ID=FC875622; Name=FC875622; organism=Citrus clementina; type=EST; length=740bpback to top |