FC875622
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_METM7 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.327e-33 Identity = 74/197 (37.56%), Postives = 118/197 (59.90%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 S Y ++T FSP G+L Q+E+A AV G T++GIK +GVV+A ++++ S L+D SS+ KI + +I SG+ D RVL+ ++R +A+ Y E I V L ++ + Q +TQ GG RPFG++LL+ G D +L++ DPSG+ +KA+A+G A LE +Y E M +++ + A+ L + E Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVNEGMELALYALSKTTE 204
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.733e-33 Identity = 77/202 (38.12%), Postives = 120/202 (59.41%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQISEKT 738 Y ++T FSP G+L Q+E+A AV G T++GIKA++GVV+ +K++ S LV+ S+ KI + +IG SG+ D R LV ++R +A+ Y E I V + ++ Q +TQ GGVRP+G +LL+AG DD P+L++ DPSG+ +KA+A+G + E Y E+M +D A+ + L + EG+ T Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNKPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYREDMNIDAAILLGMDALYKAAEGKFDAGT 210
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.263e-33 Identity = 74/197 (37.56%), Postives = 117/197 (59.39%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 S Y ++T FSP G+L Q+E+A AV G T++GIK +GVV+A ++++ S L+D SS+ KI + +I SG+ D RVL+ ++R +A+ Y E I V L ++ + Q +TQ GG RPFG++LL+ G D +L++ DPSG+ +KA+A+G A LE +Y E M + + + A+ L + E Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMTVSEGMELALYALSKTTE 204
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_METM6 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=psmA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.263e-33 Identity = 74/197 (37.56%), Postives = 118/197 (59.90%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 S Y ++T FSP G+L Q+E+A AV G T++GIK ++GVV+A ++++ S L+D SS+ KI + +I SG+ D RVL+ ++R +A+ Y E I V L ++ + Q +TQ GG RPFG++LL+ G D +L++ DPSG+ +KA+A+G A LE +Y E M + + + A+ L + E Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTE 204
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.263e-33 Identity = 74/204 (36.27%), Postives = 122/204 (59.80%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPV---TQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFEGQIS 729 ++Y + TFSP G+L Q+E+A+ A+ G T++G+K GVV+A EK++ S L++ SSV KI + +IG SG+ D R LV +R + + + Y EP+ V TQ + + A E + RPFGVSLL+AG+D+ GP LY DPSG+++ A+G A + L++++ +++ L +A A+ LK+ E +++ Sbjct: 6 TEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFNKDLTLQEAETIALSILKQVMEEKVT 209
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.956e-33 Identity = 69/187 (36.90%), Postives = 115/187 (61.50%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAI 693 Y +T FSP G+L Q+E+A AV G S+G++ GVV+A +K+ S L++ +SV KI +IG+ +G D R L+ +R Q++ Y EPI + L +E +Q++TQ GG RPFGV+LL+ G ++ P+LY+ DPSG+ + WKA ++G + + + LE+ + +++ LD+ + A+ Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDDLTLDEGIELAL 196
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSMA_METVS (Proteasome subunit alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 3.860e-33 Identity = 74/197 (37.56%), Postives = 117/197 (59.39%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 S Y ++T FSP G+L Q+E+A AV G T++GIK +GVV+A ++++ S L+D SS+ KI + +I SG+ D RVL+ ++R +A+ Y E I V L ++ + Q +T GG RPFG++LL+ G D +L++ DPSG+ +KA+A+G A LE++Y E M + + + AI L + E Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCKDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAYTHHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPVAMEILEEKYDENMSVSEGMELAIYALSKTTE 204
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA3_YEAST (Proteasome component C1 OS=Saccharomyces cerevisiae GN=PRE10 PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.042e-33 Identity = 75/171 (43.86%), Postives = 102/171 (59.65%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEK 645 Y S + FSP G+ Q+E+A+ AV +G TS+GIK ++GVV A EK + S L+ KIQ + +IG VYSG+ PD R LV + R +A + +LYK PIP+ +Q T VRPFGVS + G D G LY ++PSGSY+ +K +A GK +AK LEK Sbjct: 8 YDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEK 178
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.585e-33 Identity = 74/196 (37.76%), Postives = 114/196 (58.16%), Query Frame = 1 Query: 133 YSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKG-PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDAVHTAILTLKEGFE 717 Y ++T FSP G L Q+E+A AV G ++G+K + ++ A EKK L D + KI L +I + +G+ D RV+V ++ + +++ Y++ I V LVR A V Q TQS G RP+GVS ++ G+++ G PQL++ +PSG+ +W A+A+G+N F+EK Y + M D VH AI L E E Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSADARVVVNHAQLECQRFRLSYEDAIDVDLLVRYVARVQQRSTQSSGSRPYGVSTIIGGFNENGQPQLWKTEPSGTSSAWNAAAIGRNDKVVLEFMEKNYQDGMTRDRCVHFAIKALLEAVE 198
BLAST of FC875622 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.585e-33 Identity = 67/185 (36.22%), Postives = 116/185 (62.70%), Query Frame = 1 Query: 127 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDESSVHKIQSLTPNIGVVYSGMGPDFRVLVRKSRRQAEQYHRLYKEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDKG-PQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYVEEMELDDA 678 ++Y ++T FSP G L Q+E+A AV G T++G++ + +VI EKK L D+ ++ KI + ++ + ++G+ D RVLV ++R + + Y ++P+ V + R A Q FTQS G RPFG+S+L+ G+D G P+L++ +PSG+Y+ + A+A G+ + +LE++Y EE +D+A Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEA 186 The following BLAST results are available for this feature:
BLAST of FC875622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 177
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875622 ID=FC875622; Name=FC875622; organism=Citrus clementina; type=EST; length=740bpback to top |