FC875624
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_RAT (Glutathione peroxidase 1 OS=Rattus norvegicus GN=Gpx1 PE=1 SV=4) HSP 1 Score: 58.5362 bits (140), Expect = 2.979e-18 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 A ++Y FS + + G + VSL RGKVLL+ NVAS G T +Y E+N L ++ + VL FPCNQ Sbjct: 10 AQSTVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTTRDYTEMNDLQKRLGPRGLVVLGFPCNQ 78 HSP 2 Score: 54.299 bits (129), Expect = 2.979e-18 Identity = 38/120 (31.67%), Postives = 52/120 (43.33%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-------------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE G NEEI + F+ F +F+K +VNG+ A P++ FL++ D I WNF KFLV +G V RY+ + IE DI+ LL Sbjct: 75 PCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKAHPLFTFLRNALPAPSDDPTALMTDPKYIIWSPVCRNDISWNFEKFLVGPDGVPVRRYSRRFRTIDIEPDIEALL 194
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_MOUSE (Glutathione peroxidase 1 OS=Mus musculus GN=Gpx1 PE=1 SV=2) HSP 1 Score: 57.7658 bits (138), Expect = 3.874e-18 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 A ++Y FS + + G + VSL RGKVLL+ NVAS G T +Y E+N L ++ + VL FPCNQ Sbjct: 10 AQSTVYAFSARPLTGGEPVSLGSLRGKVLLIENVASLUGTTIRDYTEMNDLQKRLGPRGLVVLGFPCNQ 78 HSP 2 Score: 54.6842 bits (130), Expect = 3.874e-18 Identity = 38/120 (31.67%), Postives = 54/120 (45.00%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKS-------EKGGFLGDA------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE G NEEI + F+ F +F+K +VNG+ A P++ FL++ + + D I WNF KFLV +G V RY+ + IE DI+ LL Sbjct: 75 PCNQFGHQENGKNEEILNSLKYVRPGGGFEPNFTLFEKCEVNGEKAHPLFTFLRNALPTPSDDPTALMTDPKYIIWSPVCRNDIAWNFEKFLVGPDGVPVRRYSRRFRTIDIEPDIETLL 194
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_PIG (Glutathione peroxidase 1 OS=Sus scrofa GN=GPX1 PE=2 SV=2) HSP 1 Score: 61.6178 bits (148), Expect = 6.546e-18 Identity = 31/69 (44.93%), Postives = 43/69 (62.32%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 AP+S+Y FS + + G + +SL RGKVLL+ NVAS G T +Y ++N L + + VL FPCNQ Sbjct: 15 APRSVYAFSARPLAGGEPISLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQ 83 HSP 2 Score: 50.0618 bits (118), Expect = 6.546e-18 Identity = 31/92 (33.70%), Postives = 43/92 (46.74%), Query Frame = 2 Query: 404 FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-------------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 F+ F +F+K +VNG NA P++ FL+ DA I WNF KFLV +G + RY+ + IE DI+ LL Sbjct: 108 FEPNFMLFEKCEVNGANAHPLFAFLREALPTPSDDATALMTDPKFITWSPVCRNDIAWNFEKFLVGPDGVPLRRYSRRFLTIDIEPDIEALL 199
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_BOVIN (Glutathione peroxidase 1 OS=Bos taurus GN=GPX1 PE=1 SV=3) HSP 1 Score: 58.9214 bits (141), Expect = 8.512e-18 Identity = 30/69 (43.48%), Postives = 43/69 (62.32%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 AP+++Y FS + + G + +LS RGKVLL+ NVAS G T +Y ++N L + + VL FPCNQ Sbjct: 15 APRTVYAFSARPLAGGEPFNLSSLRGKVLLIENVASLUGTTVRDYTQMNDLQRRLGPRGLVVLGFPCNQ 83 HSP 2 Score: 52.373 bits (124), Expect = 8.512e-18 Identity = 37/120 (30.83%), Postives = 51/120 (42.50%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-------------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE NEEI + F+ F +F+K +VNG+ A P++ FL+ DA + WNF KFLV +G V RY+ + IE DI+ LL Sbjct: 80 PCNQFGHQENAKNEEILNCLKYVRPGGGFEPNFMLFEKCEVNGEKAHPLFAFLREVLPTPSDDATALMTDPKFITWSPVCRNDVSWNFEKFLVGPDGVPVRRYSRRFLTIDIEPDIETLL 199
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_MACFU (Glutathione peroxidase 1 OS=Macaca fuscata fuscata GN=GPX1 PE=2 SV=3) HSP 1 Score: 58.5362 bits (140), Expect = 1.440e-17 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 A +S+Y FS + + G + VSL RGKVLL+ NVAS G T +Y ++N L + + VL FPCNQ Sbjct: 10 AAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQ 78 HSP 2 Score: 51.9878 bits (123), Expect = 1.440e-17 Identity = 37/120 (30.83%), Postives = 50/120 (41.67%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-------------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE NEEI + F+ F +F+K +VNG A P++ FL+ DA + WNF KFLV +G V RY+ + IE DI+ LL Sbjct: 75 PCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLIAWSPVCRNDVAWNFEKFLVGPDGVPVRRYSRRFQTIDIEPDIEALL 194
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_PONPY (Glutathione peroxidase 1 OS=Pongo pygmaeus GN=GPX1 PE=2 SV=2) HSP 1 Score: 59.3066 bits (142), Expect = 1.872e-17 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 A +S+Y FS + + G + VSL RGKVLL+ NVAS G T +Y ++N L + + VL FPCNQ Sbjct: 10 AAQSVYSFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQ 78 HSP 2 Score: 50.8322 bits (120), Expect = 1.872e-17 Identity = 36/120 (30.00%), Postives = 50/120 (41.67%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-------------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE NEEI + F+ F +F+K +VNG A P++ FL+ DA + WNF KFLV +G + RY+ + IE DI+ LL Sbjct: 75 PCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 194
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_HUMAN (Glutathione peroxidase 1 OS=Homo sapiens GN=GPX1 PE=1 SV=3) HSP 1 Score: 58.5362 bits (140), Expect = 3.165e-17 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 A +S+Y FS + + G + VSL RGKVLL+ NVAS G T +Y ++N L + + VL FPCNQ Sbjct: 10 AAQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQ 78 HSP 2 Score: 50.8322 bits (120), Expect = 3.165e-17 Identity = 36/120 (30.00%), Postives = 50/120 (41.67%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-------------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE NEEI + F+ F +F+K +VNG A P++ FL+ DA + WNF KFLV +G + RY+ + IE DI+ LL Sbjct: 75 PCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 194
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_HYLLA (Glutathione peroxidase 1 OS=Hylobates lar GN=GPX1 PE=2 SV=2) HSP 1 Score: 58.151 bits (139), Expect = 4.114e-17 Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 A +S+Y FS + + G + VSL RGK+LL+ NVAS G T +Y ++N L + + VL FPCNQ Sbjct: 10 AAQSVYAFSARPLTGGEPVSLGSLRGKILLIENVASLUGTTVRDYTQMNELQRRLGPRGLVVLGFPCNQ 78 HSP 2 Score: 50.8322 bits (120), Expect = 4.114e-17 Identity = 36/120 (30.00%), Postives = 50/120 (41.67%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKSEKGGFLGDA-------------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE NEEI + F+ F +F+K +VNG A P++ FL+ DA + WNF KFLV +G + RY+ + IE DI+ LL Sbjct: 75 PCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 194
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPXC_DIRIM (Glutathione peroxidase OS=Dirofilaria immitis PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 5.332e-17 Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 3 Query: 126 NMATQEAPKS--IYDFSVKDIRGNDVSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 N+ Q P S IYDF V + G++ SL+ YRGKVLL+VNVA+ C T Y + N + E N ++LAFPCNQ Sbjct: 28 NLTKQCEPTSQTIYDFHVPTLDGSEKSLAEYRGKVLLLVNVATYCAYT-FQYNDFNPMLENNSNGTLKILAFPCNQ 102 HSP 2 Score: 42.743 bits (99), Expect = 5.332e-17 Identity = 25/68 (36.76%), Postives = 36/68 (52.94%), Query Frame = 2 Query: 422 IFDKIDVNGKNAAPIYKFLKS---EKGGFLGDA------------IKWNFTKFLVNKEGKVVERYAPT 580 IF K++VNG + P+YKFLK + +GD I WNF KFL++K+G R+ P+ Sbjct: 135 IFGKVEVNGDDHHPLYKFLKEHCPQTVPIIGDRHQLMYNPIGTNDIIWNFEKFLIDKKGHPRYRFHPS 202
BLAST of FC875624 vs. ExPASy Swiss-Prot
Match: GPX1_RABIT (Glutathione peroxidase 1 OS=Oryctolagus cuniculus GN=GPX1 PE=2 SV=2) HSP 1 Score: 58.5362 bits (140), Expect = 6.959e-17 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3 Query: 144 APKSIYDFSVKDIRGND-VSLSGYRGKVLLVVNVASKCGLTQSNYKELNVLYEKYKNQDFEVLAFPCNQ 347 A +S+Y FS + G + V+L RGKVLL+ NVAS G T +Y ++N L E+ + VL FPCNQ Sbjct: 9 AAQSVYSFSAHPLAGGEPVNLGSLRGKVLLIENVASLUGTTVRDYTQMNELQERLGPRALVVLGFPCNQ 77 HSP 2 Score: 49.6766 bits (117), Expect = 6.959e-17 Identity = 36/120 (30.00%), Postives = 51/120 (42.50%), Query Frame = 2 Query: 335 PLQPVAGQEPGSNEEIQEVACTM-----FKAEFPIFDKIDVNGKNAAPIYKFLKS-------EKGGFLGDA------------IKWNFTKFLVNKEGKVVERYAPTTSPLKIEKDIQNLL 622 P QE NEEI + F+ F +F K +VNG A+P++ FL+ + + D + W+F KFLV +G V RY+ + IE DIQ LL Sbjct: 74 PCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFQKCEVNGAKASPLFAFLREALPPPSDDPTALMTDPKFITWCPVCRNDVSWSFEKFLVGPDGVPVRRYSRRFPTIDIEPDIQALL 193 The following BLAST results are available for this feature:
BLAST of FC875624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875624 ID=FC875624; Name=FC875624; organism=Citrus clementina; type=EST; length=670bpback to top |