FC875626

Overview
NameFC875626
Unique NameFC875626
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: SRK2G_ARATH (Serine/threonine-protein kinase SRK2G OS=Arabidopsis thaliana GN=SRK2G PE=1 SV=2)

HSP 1 Score: 348.977 bits (894), Expect = 1.490e-95
Identity = 161/211 (76.30%), Postives = 191/211 (90.52%), Query Frame = 3
Query:   39 MERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            M++ +  +D+G+GNFGV +L+R+K T EL+A+K+IERG+KIDE+V RE +NHRSLKHP+I+RFKEV+LTPTHLAIVMEYA+GGELF+RIC  GRFSE EAR+FFQQLI GV YCHS+QICHRDLKLENTLLDGS AP ++ICDFGYSKSS+LHS+PKSTVGTPAYIAPEVL+++EYDGK ADVWSCGVTLYVMLVGAYPFEDP DPK   +
Sbjct:    1 MDKYDVVKDLGAGNFGVARLLRHKDTKELVAMKYIERGRKIDENVAREIINHRSLKHPNIIRFKEVILTPTHLAIVMEYASGGELFDRICTAGRFSEAEARYFFQQLICGVDYCHSLQICHRDLKLENTLLDGSPAPLLKICDFGYSKSSILHSRPKSTVGTPAYIAPEVLSRREYDGKHADVWSCGVTLYVMLVGAYPFEDPNDPKNFRK 211          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: SAPK4_ORYSJ (Serine/threonine-protein kinase SAPK4 OS=Oryza sativa subsp. japonica GN=SAPK4 PE=2 SV=2)

HSP 1 Score: 348.591 bits (893), Expect = 1.946e-95
Identity = 163/211 (77.25%), Postives = 190/211 (90.05%), Query Frame = 3
Query:   39 MERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            ME+ E  +DIGSGNFGV +L+R + T EL+AVK IERG +IDE+V RE +NHRSL+HP+I+RFKEV+LTPTHL IVME+AAGGELF+RIC+ GRFSEDEAR+FFQQLI GVSYCH MQICHRDLKLEN LLDGS APR++ICDFGYSKSSVLHS+PKS VGTPAYIAPEVL+++EYDGK+ADVWSCGVTLYVMLVGAYPFED +DPK + +
Sbjct:    1 MEKYEAVRDIGSGNFGVARLMRNRETRELVAVKCIERGHRIDENVYREIINHRSLRHPNIIRFKEVILTPTHLMIVMEFAAGGELFDRICDRGRFSEDEARYFFQQLICGVSYCHHMQICHRDLKLENVLLDGSPAPRLKICDFGYSKSSVLHSRPKSAVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQDDPKNIRK 211          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: SRK2J_ARATH (Serine/threonine-protein kinase SRK2J OS=Arabidopsis thaliana GN=SRK2J PE=1 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.443e-90
Identity = 158/211 (74.88%), Postives = 181/211 (85.78%), Query Frame = 3
Query:   39 MERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            ME+ E  +D+G GNFG+ +L+R K T EL+AVKFI+RG KIDE+V RE +NHR+L HP+IVRFKEV+LTPTHL IVMEYAAGGELFERI + GRFSE EAR+FFQQLI GV Y H++QICHRDLKLENTLLDGS APR++ICDFGYSKSSVLHS PKSTVGTPAYIAPEV  + EYDGK  DVWSCGV LYVMLVGAYPFEDP+DP+   +
Sbjct:    1 MEKYEMVKDLGFGNFGLARLMRNKQTNELVAVKFIDRGYKIDENVAREIINHRALNHPNIVRFKEVVLTPTHLGIVMEYAAGGELFERISSVGRFSEAEARYFFQQLICGVHYLHALQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSNPKSTVGTPAYIAPEVFCRSEYDGKSVDVWSCGVALYVMLVGAYPFEDPKDPRNFRK 211          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPK9_ORYSJ (CBL-interacting protein kinase 9 OS=Oryza sativa subsp. japonica GN=CIPK9 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.042e-44
Identity = 94/221 (42.53%), Postives = 135/221 (61.09%), Query Frame = 3
Query:   18 PCKEEEIMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQ----KIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDP 647
            P +    + R E  + IG G+F   K+ R   T + LA+K ++R      K+ E ++RE    + +KHP++V+  EV+ + + + +V+EY  GGELF++I N+GR  EDEAR +F QLI+ V YCHS  + HRDLK EN LLD   A  +++ DFG S       +  +LH    +  GTP Y+APEVL  K YDG  ADVWSCG+ L+V++ G  PF+DP
Sbjct:   17 PARRTTRVGRYELGKTIGEGSFAKVKVARDTRTGDTLAIKVLDRNHVLRHKMVEQIKREISTMKLIKHPNVVQLHEVMASKSKIYMVLEYVDGGELFDKIVNSGRLGEDEARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDSHGA--LKVSDFGLSAFAPQTKEDGLLH----TACGTPNYVAPEVLADKGYDGMAADVWSCGIILFVLMAGYLPFDDP 231          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKL_ORYSJ (CBL-interacting protein kinase 21 OS=Oryza sativa subsp. japonica GN=CIPK21 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.666e-44
Identity = 95/213 (44.60%), Postives = 129/213 (60.56%), Query Frame = 3
Query:   39 MERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIER----GQKIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFED 644
            M + E  + +G G+FG  KL R+  T    A+K ++R      KIDE ++RE    + LKHP++VR  EV  + T + +V+EY  GGELF++I   G+ SE E R  FQQL+  VSYCH   + HRDLK EN L+D      +++ DFG S       K  +LH    +T G+P YIAPEVL  + YDG ++D+WSCGV LYVML G  PF+D
Sbjct:   84 MGKYEMGRALGEGHFGKVKLARHADTGAAFAIKILDRQRILAMKIDEQIKREIATLKLLKHPNVVRLHEVSASKTKIYMVLEYVNGGELFDKIALKGKLSEKEGRKLFQQLMDAVSYCHEKGVYHRDLKPENVLVDAK--GNIKVSDFGLSALPQNQRKDGLLH----TTCGSPNYIAPEVLLNRGYDGSLSDIWSCGVILYVMLTGNLPFDD 290          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPK1_ORYSJ (CBL-interacting protein kinase 1 OS=Oryza sativa subsp. japonica GN=CIPK1 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 3.482e-44
Identity = 95/219 (43.38%), Postives = 130/219 (59.36%), Query Frame = 3
Query:   21 CKEEEIMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQ----KIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFED 644
            C    ++ R E  + +G GNFG  K  R+  T    A+K ++R +    + D+ ++RE    + LKHP++VR  EV  + T + +V+EY  GGELF++I   G+ SE E R  FQQLI  VSYCH   + HRDLK EN L+D      ++I DFG S          +LH    +T G+P YIAPEVL  + YDG ++D+WSCGV LYVMLVG  PF+D
Sbjct:   10 CTRASLLGRYEIGRTLGEGNFGKVKYARHLATGAHFAIKILDRNKILSLRFDDQIRREIGTLKLLKHPNVVRLHEVAASKTKIYMVLEYVNGGELFDKIAVKGKLSEHEGRRLFQQLIDAVSYCHDKGVYHRDLKPENVLVD--RRGNIKISDFGLSALPQHLGNDGLLH----TTCGSPNYIAPEVLQNRGYDGSLSDIWSCGVILYVMLVGYLPFDD 222          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKH_ORYSJ (CBL-interacting protein kinase 17 OS=Oryza sativa subsp. japonica GN=CIPK17 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 7.758e-44
Identity = 100/238 (42.02%), Postives = 138/238 (57.98%), Query Frame = 3
Query:   30 EEIMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKID----EHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER-HRSNTQCPLLIS 707
            E ++   E  + +G GNFG  K  R+  T    AVK ++RG+ +     + ++RE    + L+HP +VR  EV  + T + +V+E+  GGELFERI   G+ SE E R  FQQLI GVSYCH   + HRDLK EN L+D      ++I DFG S          +LH    +T G+P YIAPEVL  K YDG ++D+WSCGV LYVML+G  PF+D       ++  + +TQ P  +S
Sbjct:    7 EALLGGYEMGRTLGEGNFGKVKYARHLATGGHFAVKILDRGRVVSLRAGDQIRREIATLKLLRHPHVVRLHEVAASKTKIYMVLEFVNGGELFERIAVKGKLSEKEGRRLFQQLIDGVSYCHDRGVYHRDLKPENVLVD--QKGNIKISDFGLSALPQHLGNDGLLH----TTCGSPNYIAPEVLQNKGYDGSLSDIWSCGVILYVMLIGYLPFDDRNIVVLYQKIFKGDTQIPKWLS 238          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPK3_ARATH (CBL-interacting serine/threonine-protein kinase 3 OS=Arabidopsis thaliana GN=CIPK3 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.948e-43
Identity = 94/209 (44.98%), Postives = 129/209 (61.72%), Query Frame = 3
Query:   51 ETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQ----KIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSS-------VLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFED 644
            E  + IG G F   K  R   T E +A+K +++ +    K+ E ++RE    + +KHP++V+  EV+ + T + I++EY  GGELF++I N GR  EDEAR +FQQLI  V YCHS  + HRDLK EN LLD  +   ++I DFG S  S       +LH    ++ GTP Y+APEVL  + YDG  AD+WSCGV LYV+L G  PF+D
Sbjct:   15 EVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKHKMAEQIRREIATMKLIKHPNVVQLYEVMASKTKIFIILEYVTGGELFDKIVNDGRMKEDEARRYFQQLIHAVDYCHSRGVYHRDLKPENLLLD--SYGNLKISDFGLSALSQQVRDDGLLH----TSCGTPNYVAPEVLNDRGYDGATADMWSCGVVLYVLLAGYLPFDD 217          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKX_ORYSJ (CBL-interacting protein kinase 33 OS=Oryza sativa subsp. japonica GN=CIPK33 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 3.850e-43
Identity = 99/224 (44.20%), Postives = 138/224 (61.61%), Query Frame = 3
Query:   51 ETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQ----KIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSS-------VLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHRSNTQ 689
            E  + IG G F   K  R   T + +A+K +++ +    K+ E ++RE    + +KHP++VR  EV+ + T++ IV+EY  GGELF+ I N GR  EDEAR +FQQLI+ V YCHS  + HRDLK EN LLD  +   +++ DFG S  S       +LH    +T GTP Y+APEVL  + YDG +AD+WSCGV L+V+L G  PFED  +  TL +  SN +
Sbjct:   14 ELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTNIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLD--SYGNLKVSDFGLSALSQQIKDDGLLH----TTCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFED-SNLMTLYKKISNAE 230          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKW_ORYSJ (CBL-interacting protein kinase 32 OS=Oryza sativa subsp. japonica GN=CIPK32 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 6.568e-43
Identity = 99/224 (44.20%), Postives = 137/224 (61.16%), Query Frame = 3
Query:   51 ETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQ----KIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSS-------VLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHRSNTQ 689
            E  + IG G F   K  R   T + +A+K +++ +    K+ E ++RE    + +KHP++VR  EV+ + T + IV+EY  GGELF+ I N GR  EDEAR +FQQLI+ V YCHS  + HRDLK EN LLD  +   +++ DFG S  S       +LH    +T GTP Y+APEVL  + YDG +AD+WSCGV L+V+L G  PFED  +  TL +  SN +
Sbjct:   14 ELGRTIGEGTFAKVKFARDTETGDPVAIKILDKEKVLKHKMVEQIKREISTMKLIKHPNVVRIYEVMGSKTKIYIVLEYVTGGELFDTIVNHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLD--SYGNLKVSDFGLSALSQQIKDDGLLH----TTCGTPNYVAPEVLEDQGYDGAMADLWSCGVILFVLLAGYLPFED-SNLMTLYKKISNAE 230          
The following BLAST results are available for this feature:
BLAST of FC875626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SRK2G_ARATH1.490e-9576.30Serine/threonine-protein kinase SRK2G OS=Arabidops... [more]
SAPK4_ORYSJ1.946e-9577.25Serine/threonine-protein kinase SAPK4 OS=Oryza sat... [more]
SRK2J_ARATH1.443e-9074.88Serine/threonine-protein kinase SRK2J OS=Arabidops... [more]
CIPK9_ORYSJ2.042e-4442.53CBL-interacting protein kinase 9 OS=Oryza sativa s... [more]
CIPKL_ORYSJ2.666e-4444.60CBL-interacting protein kinase 21 OS=Oryza sativa ... [more]
CIPK1_ORYSJ3.482e-4443.38CBL-interacting protein kinase 1 OS=Oryza sativa s... [more]
CIPKH_ORYSJ7.758e-4442.02CBL-interacting protein kinase 17 OS=Oryza sativa ... [more]
CIPK3_ARATH2.948e-4344.98CBL-interacting serine/threonine-protein kinase 3 ... [more]
CIPKX_ORYSJ3.850e-4344.20CBL-interacting protein kinase 33 OS=Oryza sativa ... [more]
CIPKW_ORYSJ6.568e-4344.20CBL-interacting protein kinase 32 OS=Oryza sativa ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31401A07EF CTVClemen1 Citrus clementina cDNA clone C31401A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875626 ID=FC875626; Name=FC875626; organism=Citrus clementina; type=EST; length=711bp
GGACCTTCAAGTTCAAGCCTTGCAAAGAAGAGGAAATCATGGAGAGATGT
GAGACTGCGCAGGACATAGGGTCTGGGAACTTTGGGGTATGCAAGCTTGT
CAGATACAAATGGACAATGGAGCTTCTTGCTGTTAAGTTCATTGAGAGAG
GCCAAAAGATTGACGAACATGTGCAGAGGGAAACCATGAACCACAGATCA
TTGAAGCATCCTGATATTGTCAGATTCAAAGAGGTTCTGCTGACCCCTAC
TCATCTAGCCATAGTCATGGAATATGCTGCTGGAGGAGAACTGTTTGAGA
GGATATGCAATACTGGCAGATTCAGTGAGGATGAGGCAAGGTTTTTCTTC
CAGCAACTGATATCAGGAGTCAGTTATTGCCATTCTATGCAAATTTGTCA
CAGAGATCTCAAGCTTGAGAATACACTCTTGGATGGCAGCACTGCTCCAC
GTGTTAGGATATGTGACTTTGGGTACTCGAAGTCTTCTGTGTTGCATTCT
CAACCAAAATCTACAGTAGGAACCCCAGCATACATTGCACCCGAAGTTCT
AACTAAAAAAGAATATGATGGGAAGATTGCAGATGTTTGGTCTTGTGGGG
TCACCTTATATGTGATGCTAGTTGGGGCATATCCTTTTGAAGATCCTGAA
GATCCAAAAACTTTAGAAAGACATCGGTCGAATACTCAGTGTCCACTACT
CATTTCAGATT
back to top