FC875626

Overview
NameFC875626
Unique NameFC875626
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.583e-39
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDE-----HVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHR 677
            +G G FG  K+  ++ T   +AVK + R QKI        ++RE  N +  +HP I++  +V+ TPT   +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       +I DFG S         +++ G+P Y APEV++ + Y G   D+WSCGV LY +L G  PF+D   P   ++ R
Sbjct:   22 LGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR 227          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.583e-39
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDE-----HVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHR 677
            +G G FG  K+  ++ T   +AVK + R QKI        ++RE  N +  +HP I++  +V+ TPT   +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       +I DFG S         +++ G+P Y APEV++ + Y G   D+WSCGV LY +L G  PF+D   P   ++ R
Sbjct:   22 LGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR 227          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: AAPK2_MOUSE (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Mus musculus GN=Prkaa2 PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.583e-39
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDE-----HVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHR 677
            +G G FG  K+  ++ T   +AVK + R QKI        ++RE  N +  +HP I++  +V+ TPT   +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       +I DFG S         +++ G+P Y APEV++ + Y G   D+WSCGV LY +L G  PF+D   P   ++ R
Sbjct:   22 LGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEVEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAQM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR 227          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKQ_ARATH (CBL-interacting serine/threonine-protein kinase 26 OS=Arabidopsis thaliana GN=CIPK26 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.373e-39
Identity = 89/218 (40.83%), Postives = 128/218 (58.72%), Query Frame = 3
Query:   24 KEEEIMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQ----KIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSS-------VLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFED 644
            K +  + + E  + +G G F   +      T E +A+K +++ +    K+ E ++RE    + + HP++VR  EVL + T + IV+E+  GGELF++I + GR  E+ AR +FQQLI+ V YCHS  + HRDLK EN LLD      +++ DFG S  S       +LH    +  GTP Y APEVL  + YDG  AD+WSCGV L+V+L G  PFED
Sbjct:    5 KVQRRVGKYEVGKTLGQGTFAKVRCAVNTETGERVALKILDKEKVLKHKMAEQIRREICTMKLINHPNVVRLYEVLASKTKIYIVLEFGTGGELFDKIVHDGRLKEENARKYFQQLINAVDYCHSRGVYHRDLKPENLLLDAQ--GNLKVSDFGLSALSRQVRGDGLLH----TACGTPNYAAPEVLNDQGYDGATADLWSCGVILFVLLAGYLPFED 216          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKO_ARATH (CBL-interacting serine/threonine-protein kinase 24 OS=Arabidopsis thaliana GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.373e-39
Identity = 87/221 (39.37%), Postives = 132/221 (59.73%), Query Frame = 3
Query:   51 ETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERG----QKIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER-HRSNTQCP 695
            E  + IG G F   K  R   T + +A+K + +      ++ + ++RE    + ++HP+IVR  EVL +P+ + IV+E+  GGELF+RI + GR  E E+R +FQQL+  V++CH   + HRDLK EN LLD  T   +++ DFG S       +  ++T GTP Y+APEVL+ + YDG  AD+WSCGV L+V+L G  PF + + P    + + +   CP
Sbjct:   12 EVGRTIGEGTFAKVKFARNTDTGDNVAIKIMAKSTILKNRMVDQIKREISIMKIVRHPNIVRLYEVLASPSKIYIVLEFVTGGELFDRIVHKGRLEESESRKYFQQLVDAVAHCHCKGVYHRDLKPENLLLD--TNGNLKVSDFGLSALPQEGVELLRTTCGTPNYVAPEVLSGQGYDGSAADIWSCGVILFVILAGYLPFSETDLPGLYRKINAAEFSCP 230          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.373e-39
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDE-----HVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHR 677
            +G G FG  K+  ++ T   +AVK + R QKI        ++RE  N +  +HP I++  +V+ TPT   +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       +I DFG S         +++ G+P Y APEV++ + Y G   D+WSCGV LY +L G  PF+D   P   ++ R
Sbjct:   22 LGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR 227          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: AAPK2_CAEEL (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Caenorhabditis elegans GN=aak-2 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.373e-39
Identity = 89/212 (41.98%), Postives = 122/212 (57.55%), Query Frame = 3
Query:   60 QDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDE-----HVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHRS 680
            + +G G FG  K+  ++ T   +AVK + R QKI        ++RE  N    +HP I+R  +V+ TP+ + ++ME+ +GGELF+ I   GR    EAR FFQQ+ISGV YCH   + HRDLK EN LLD      V+I DFG S         +++ G+P Y APEV++ K Y G   DVWSCGV LY +L G  PF+D   P    + +S
Sbjct:   91 ETLGVGTFGKVKVGIHETTQYKVAVKILNR-QKIKSLDVVGKIRREIQNLSLFRHPHIIRLYQVISTPSDIFMIMEHVSGGELFDYIVKHGRLKTAEARRFFQQIISGVDYCHRHMVVHRDLKPENLLLDEQN--NVKIADFGLSNIMTDGDFLRTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDEHVPSLFRKIKS 299          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKO_ORYSJ (CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica GN=CIPK24 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39
Identity = 91/231 (39.39%), Postives = 132/231 (57.14%), Query Frame = 3
Query:   45 RCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIER----GQKIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSS-----VLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHRSNT-QCPLLIS 707
            R E  + IG G F   K      T   +A+K +++      ++   ++RE    + ++HP+IVR  EVL   T + I++E   GGELF++I   G+  E+EAR +FQQLI  ++YCHS  + HRDLK EN LLD  +   +++ DFG S  +     +LH    +T GTP Y+APEVL+   YDG  ADVWSCGV LYV++ G  PFE+ + P   ++  +    CP   S
Sbjct:   17 RYEVGRTIGQGTFAKVKFAVDADTGAAVAMKVLDKDTILNHRMLHQIKREISIMKIVRHPNIVRLNEVLAGKTKIYIILELITGGELFDKIARQGKLRENEARKYFQQLIDAINYCHSKGVYHRDLKPENLLLD--SRGNLKVSDFGLSTLAQKGVGLLH----TTCGTPNYVAPEVLSNNGYDGSAADVWSCGVILYVLMAGYLPFEEDDLPTLYDKITAGQFSCPYWFS 241          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: AAPK2_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.405e-39
Identity = 87/209 (41.63%), Postives = 120/209 (57.42%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDE-----HVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLERHR 677
            +G G FG  K+  ++ T   +AVK + R QKI        ++RE  N +  +HP I++  +V+ TPT   +VMEY +GGELF+ IC  GR  E EAR  FQQ++S V YCH   + HRDLK EN LLD       +I DFG S         +++ G+P Y APEV++ + Y G   D+WSCGV LY +L G  PF+D   P   ++ R
Sbjct:   22 LGVGTFGKVKIGEHQLTGHKVAVKILNR-QKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHM--NAKIADFGLSNIMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR 227          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPK5_ARATH (CBL-interacting serine/threonine-protein kinase 5 OS=Arabidopsis thaliana GN=CIPK5 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.754e-39
Identity = 97/221 (43.89%), Postives = 130/221 (58.82%), Query Frame = 3
Query:   27 EEE---IMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKID-----EHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFED 644
            EEE   +  + E  + +G G F      +     E +A+K I + Q +      E ++RE    + ++HP+IV  KEV+ T T +  VME+  GGELF +I + G+  ED AR +FQQLIS V YCHS  + HRDLK EN LLD +    ++I DFG S       +  +LH+Q     GTPAY+APEVL KK YDG  AD+WSCGV LYV+L G  PF+D
Sbjct:    2 EEERRVLFGKYEMGRLLGKGTFAKVYYGKEIIGGECVAIKVINKDQVMKRPGMMEQIKREISIMKLVRHPNIVELKEVMATKTKIFFVMEFVKGGELFCKI-SKGKLHEDAARRYFQQLISAVDYCHSRGVSHRDLKPENLLLDENGD--LKISDFGLSALPEQILQDGLLHTQ----CGTPAYVAPEVLKKKGYDGAKADIWSCGVVLYVLLAGCLPFQD 215          
The following BLAST results are available for this feature:
BLAST of FC875626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AAPK2_RAT2.583e-3941.635'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG2.583e-3941.635'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_MOUSE2.583e-3941.635'-AMP-activated protein kinase catalytic subunit ... [more]
CIPKQ_ARATH3.373e-3940.83CBL-interacting serine/threonine-protein kinase 26... [more]
CIPKO_ARATH3.373e-3939.37CBL-interacting serine/threonine-protein kinase 24... [more]
AAPK2_HUMAN3.373e-3941.635'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_CAEEL3.373e-3941.985'-AMP-activated protein kinase catalytic subunit ... [more]
CIPKO_ORYSJ4.405e-3939.39CBL-interacting protein kinase 24 OS=Oryza sativa ... [more]
AAPK2_PONAB4.405e-3941.635'-AMP-activated protein kinase catalytic subunit ... [more]
CIPK5_ARATH5.754e-3943.89CBL-interacting serine/threonine-protein kinase 5 ... [more]

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Properties
Property NameValue
Genbank descriptionC31401A07EF CTVClemen1 Citrus clementina cDNA clone C31401A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875626 ID=FC875626; Name=FC875626; organism=Citrus clementina; type=EST; length=711bp
GGACCTTCAAGTTCAAGCCTTGCAAAGAAGAGGAAATCATGGAGAGATGT
GAGACTGCGCAGGACATAGGGTCTGGGAACTTTGGGGTATGCAAGCTTGT
CAGATACAAATGGACAATGGAGCTTCTTGCTGTTAAGTTCATTGAGAGAG
GCCAAAAGATTGACGAACATGTGCAGAGGGAAACCATGAACCACAGATCA
TTGAAGCATCCTGATATTGTCAGATTCAAAGAGGTTCTGCTGACCCCTAC
TCATCTAGCCATAGTCATGGAATATGCTGCTGGAGGAGAACTGTTTGAGA
GGATATGCAATACTGGCAGATTCAGTGAGGATGAGGCAAGGTTTTTCTTC
CAGCAACTGATATCAGGAGTCAGTTATTGCCATTCTATGCAAATTTGTCA
CAGAGATCTCAAGCTTGAGAATACACTCTTGGATGGCAGCACTGCTCCAC
GTGTTAGGATATGTGACTTTGGGTACTCGAAGTCTTCTGTGTTGCATTCT
CAACCAAAATCTACAGTAGGAACCCCAGCATACATTGCACCCGAAGTTCT
AACTAAAAAAGAATATGATGGGAAGATTGCAGATGTTTGGTCTTGTGGGG
TCACCTTATATGTGATGCTAGTTGGGGCATATCCTTTTGAAGATCCTGAA
GATCCAAAAACTTTAGAAAGACATCGGTCGAATACTCAGTGTCCACTACT
CATTTCAGATT
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