FC875626

Overview
NameFC875626
Unique NameFC875626
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length711
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKG_ORYSJ (CBL-interacting protein kinase 16 OS=Oryza sativa subsp. japonica GN=CIPK16 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.361e-38
Identity = 92/237 (38.82%), Postives = 138/237 (58.23%), Query Frame = 3
Query:   36 IMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIE-----RGQKIDEHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYS-------KSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER-HRSNTQCPLLIS 707
            ++ R E  + +G G F      R   + E +A+K I+     R + + E ++RE    R ++HP++V  +EVL +   + +VMEYA GGELF ++   GR +E+ AR +FQQL++ V +CH   + HRDLK EN LLD     R+++ DFG +       +  +LH+Q     GTPAY+APEVL K+ YDG  AD+WSCGV LYV+L G  PF+     K  ++  ++  Q P  +S
Sbjct:   18 VLGRYELGRLLGQGTFAKVYYGRDLRSGESVAIKVIDKARLRRTEGMVEQLRREISIMRMVRHPNVVGIREVLASRARVFVVMEYARGGELFAKVAR-GRLTEEHARRYFQQLVAAVGFCHGRGVAHRDLKPENLLLDEEG--RLKVTDFGLAALPEQLRQDGLLHTQ----CGTPAYVAPEVLRKRGYDGARADLWSCGVVLYVLLCGFLPFQHENYAKMYQKIFKAEYQVPPWVS 247          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: SIK1_HUMAN (Serine/threonine-protein kinase SIK1 OS=Homo sapiens GN=SIK1 PE=1 SV=2)

HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38
Identity = 86/207 (41.55%), Postives = 124/207 (59.90%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKID----EHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKST-VGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            +G GNF V KL R++ T   +A+K I++  ++D    E + RE    + L HP I++  +V+ T   L IV E+A  GE+F+ + + G  SE+EAR  F Q++S V YCH   I HRDLK EN LLDG+    +++ DFG+  +     +P ST  G+P Y APEV   KEY+G   D+WS GV LYV++ G+ PF+ P  P   +R
Sbjct:   33 LGKGNFAVVKLARHRVTKTQVAIKIIDK-TRLDSSNLEKIYREVQLMKLLNHPHIIKLYQVMETKDMLYIVTEFAKNGEMFDYLTSNGHLSENEARKKFWQILSAVEYCHDHHIVHRDLKTENLLLDGNM--DIKLADFGFG-NFYKSGEPLSTWCGSPPYAAPEVFEGKEYEGPQLDIWSLGVVLYVLVCGSLPFDGPNLPTLRQR 235          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: MARK3_RAT (MAP/microtubule affinity-regulating kinase 3 OS=Rattus norvegicus GN=Mark3 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.308e-38
Identity = 86/205 (41.95%), Postives = 120/205 (58.54%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDEHVQ---RETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            IG GNF   KL R+  T   +A+K I++ Q     +Q   RE    + L HP+IV+  EV+ T   L ++MEYA+GGE+F+ +   GR  E EAR  F+Q++S V YCH  +I HRDLK EN LLD      ++I DFG+S    + S+  +  G+P Y APE+   K+YDG   DVWS GV LY ++ G+ PF+     +  ER
Sbjct:   62 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADM--NIKITDFGFSNEFTVGSKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 264          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: SIK2_MOUSE (Serine/threonine-protein kinase SIK2 OS=Mus musculus GN=Sik2 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37
Identity = 83/206 (40.29%), Postives = 121/206 (58.74%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKID----EHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            +G GNF V KL R++ T   +A+K I++ Q +D    E + RE    + L HP I++  +V+ T + L +V EYA  GE+F+ + N GR +E EAR  F Q++S V YCH  ++ HRDLK EN LLD +    ++I DFG+           +  G+P Y APEV   ++Y+G   D+WS GV LYV++ GA PF+ P  P   +R
Sbjct:   26 LGKGNFAVVKLGRHRTTKTEVAIKIIDKSQ-LDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKVVHRDLKAENLLLDNNM--NIKIADFGFGNFFKTGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQR 228          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPKC_ARATH (CBL-interacting serine/threonine-protein kinase 12 OS=Arabidopsis thaliana GN=CIPK12 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.085e-37
Identity = 91/228 (39.91%), Postives = 131/228 (57.46%), Query Frame = 3
Query:   36 IMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKID----EHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER-HRSNTQCP 695
            I+ R E  + +G G F    L R   T E +A+K I++ + +      H++RE    R ++HP+IV+  EV+ T   +  VMEY  GGELF ++   GR  E+ AR +FQQLIS V++CH+  + HRDLK EN LLD +    +++ DFG S  S    Q     +  GTPAY+APEVL +K YD    D+WSCGV L+V++ G  PF D       ++ +R   +CP
Sbjct:   22 ILGRYEMGKLLGHGTFAKVYLARNVKTNESVAIKVIDKEKVLKGGLIAHIKREISILRRVRHPNIVQLFEVMATKAKIYFVMEYVRGGELFNKVAK-GRLKEEVARKYFQQLISAVTFCHARGVYHRDLKPENLLLDENG--NLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYDAAKVDIWSCGVILFVLMAGYLPFHDRNVMAMYKKIYRGEFRCP 246          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: SIK2_HUMAN (Serine/threonine-protein kinase SIK2 OS=Homo sapiens GN=SIK2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37
Identity = 84/206 (40.78%), Postives = 121/206 (58.74%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKID----EHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            +G GNF V KL R++ T   +A+K I++ Q +D    E + RE    + L HP I++  +V+ T + L +V EYA  GE+F+ + N GR +E EAR  F Q++S V YCH  +I HRDLK EN LLD +    ++I DFG+           +  G+P Y APEV   ++Y+G   D+WS GV LYV++ GA PF+ P  P   +R
Sbjct:   26 LGKGNFAVVKLGRHRITKTEVAIKIIDKSQ-LDAVNLEKIYREVQIMKMLDHPHIIKLYQVMETKSMLYLVTEYAKNGEIFDYLANHGRLNESEARRKFWQILSAVDYCHGRKIVHRDLKAENLLLDNNM--NIKIADFGFGNFFKSGELLATWCGSPPYAAPEVFEGQQYEGPQLDIWSMGVVLYVLVCGALPFDGPTLPILRQR 228          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: MARK2_RAT (Serine/threonine-protein kinase MARK2 OS=Rattus norvegicus GN=Mark2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37
Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDEHVQ---RETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            IG GNF   KL R+  T + +AVK I++ Q     +Q   RE    + L HP+IV+  EV+ T   L +VMEYA+GGE+F+ +   GR  E EAR  F+Q++S V YCH   I HRDLK EN LLD      ++I DFG+S      ++  +  G+P Y APE+   K+YDG   DVWS GV LY ++ G+ PF+     +  ER
Sbjct:   59 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 261          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: MARK2_HUMAN (Serine/threonine-protein kinase MARK2 OS=Homo sapiens GN=MARK2 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37
Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDEHVQ---RETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            IG GNF   KL R+  T + +AVK I++ Q     +Q   RE    + L HP+IV+  EV+ T   L +VMEYA+GGE+F+ +   GR  E EAR  F+Q++S V YCH   I HRDLK EN LLD      ++I DFG+S      ++  +  G+P Y APE+   K+YDG   DVWS GV LY ++ G+ PF+     +  ER
Sbjct:   59 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADM--NIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 261          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: CIPK5_ORYSJ (CBL-interacting protein kinase 5 OS=Oryza sativa subsp. japonica GN=CIPK5 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.417e-37
Identity = 85/214 (39.72%), Postives = 124/214 (57.94%), Query Frame = 3
Query:   24 KEEEIMERCETAQDIGSGNFGVCKLVRYKWTMELLAVKFIERGQKID----EHVQRETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQP---KSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFED 644
            K   +M R E  + +G G F      R   + + +A+K I++ + +     + ++RE    R ++HP+IV+  EV+ + + +   MEY  GGELF R+   GR  ED AR +FQQLI  V +CHS  + HRDLK EN L+D +    +++ DFG S       Q     +T GTPAY+APE++ K+ YDG  AD+WSCGV L+V+L G  PF D
Sbjct:    4 KASILMNRYELGRMLGQGTFAKVYHARNLASNQSVAIKVIDKEKVLRVGMIDQIKREISIMRLVRHPNIVQLHEVMASKSKIYFAMEYVRGGELFSRVAR-GRLKEDAARKYFQQLIGAVDFCHSRGVYHRDLKPENLLVDENG--NLKVSDFGLSAFKECQKQDGLLHTTCGTPAYVAPEIINKRGYDGAKADIWSCGVILFVLLAGYLPFHD 214          
BLAST of FC875626 vs. ExPASy Swiss-Prot
Match: MARK1_RAT (Serine/threonine-protein kinase MARK1 OS=Rattus norvegicus GN=Mark1 PE=1 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.851e-37
Identity = 87/205 (42.44%), Postives = 119/205 (58.05%), Query Frame = 3
Query:   66 IGSGNFGVCKLVRYKWTMELLAVKFIERGQKIDEHVQ---RETMNHRSLKHPDIVRFKEVLLTPTHLAIVMEYAAGGELFERICNTGRFSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGSTAPRVRICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLTKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKTLER 671
            IG GNF   KL R+  T   +AVK I++ Q     +Q   RE    + L HP+IV+  EV+ T   L +VMEYA+GGE+F+ +   GR  E EAR  F+Q++S V YCH   I HRDLK EN LLD      ++I DFG+S    + ++  +  G+P Y APE+   K+YDG   DVWS GV LY ++ G+ PF+     +  ER
Sbjct:   66 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKCIVHRDLKAENLLLDADM--NIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 268          
The following BLAST results are available for this feature:
BLAST of FC875626 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CIPKG_ORYSJ6.361e-3838.82CBL-interacting protein kinase 16 OS=Oryza sativa ... [more]
SIK1_HUMAN8.308e-3841.55Serine/threonine-protein kinase SIK1 OS=Homo sapie... [more]
MARK3_RAT8.308e-3841.95MAP/microtubule affinity-regulating kinase 3 OS=Ra... [more]
SIK2_MOUSE1.085e-3740.29Serine/threonine-protein kinase SIK2 OS=Mus muscul... [more]
CIPKC_ARATH1.085e-3739.91CBL-interacting serine/threonine-protein kinase 12... [more]
SIK2_HUMAN1.417e-3740.78Serine/threonine-protein kinase SIK2 OS=Homo sapie... [more]
MARK2_RAT1.417e-3742.44Serine/threonine-protein kinase MARK2 OS=Rattus no... [more]
MARK2_HUMAN1.417e-3742.44Serine/threonine-protein kinase MARK2 OS=Homo sapi... [more]
CIPK5_ORYSJ1.417e-3739.72CBL-interacting protein kinase 5 OS=Oryza sativa s... [more]
MARK1_RAT1.851e-3742.44Serine/threonine-protein kinase MARK1 OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionC31401A07EF CTVClemen1 Citrus clementina cDNA clone C31401A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875626 ID=FC875626; Name=FC875626; organism=Citrus clementina; type=EST; length=711bp
GGACCTTCAAGTTCAAGCCTTGCAAAGAAGAGGAAATCATGGAGAGATGT
GAGACTGCGCAGGACATAGGGTCTGGGAACTTTGGGGTATGCAAGCTTGT
CAGATACAAATGGACAATGGAGCTTCTTGCTGTTAAGTTCATTGAGAGAG
GCCAAAAGATTGACGAACATGTGCAGAGGGAAACCATGAACCACAGATCA
TTGAAGCATCCTGATATTGTCAGATTCAAAGAGGTTCTGCTGACCCCTAC
TCATCTAGCCATAGTCATGGAATATGCTGCTGGAGGAGAACTGTTTGAGA
GGATATGCAATACTGGCAGATTCAGTGAGGATGAGGCAAGGTTTTTCTTC
CAGCAACTGATATCAGGAGTCAGTTATTGCCATTCTATGCAAATTTGTCA
CAGAGATCTCAAGCTTGAGAATACACTCTTGGATGGCAGCACTGCTCCAC
GTGTTAGGATATGTGACTTTGGGTACTCGAAGTCTTCTGTGTTGCATTCT
CAACCAAAATCTACAGTAGGAACCCCAGCATACATTGCACCCGAAGTTCT
AACTAAAAAAGAATATGATGGGAAGATTGCAGATGTTTGGTCTTGTGGGG
TCACCTTATATGTGATGCTAGTTGGGGCATATCCTTTTGAAGATCCTGAA
GATCCAAAAACTTTAGAAAGACATCGGTCGAATACTCAGTGTCCACTACT
CATTTCAGATT
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