FC875627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 4.419e-53 Identity = 107/216 (49.54%), Postives = 138/216 (63.89%), Query Frame = 1 Query: 100 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNFPD 732 A FGR D++ S +A LAEF+ST +FVFA GS ++ +K+ + A P GL+ +A+ H FALF AV+ N+SGGHVNPAVTFG +GG++T + I+YWIAQLLG+I+A LL++ T G+ TFGLVY VY+T DPK+GSLG IAP+AIG IVGANIL GPFSG SMNP R+FGPA+ + D Sbjct: 8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAAEGSILSLDKLYWEHAAHAGTNTPGGLILVALAHAFALFAAVSAAINVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHD 223
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP32_ARATH (Probable aquaporin TIP3-2 OS=Arabidopsis thaliana GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.286e-52 Identity = 105/209 (50.24%), Postives = 136/209 (65.07%), Query Frame = 1 Query: 100 AIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALD-----PSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAV 711 A FGR D++ S +A LAEF+ST +FVFAG GS +A +K+ D A P GLV +A+ H ALF AV+ N+SGGHVNPAVTF +GG+I+++ I+YW+AQL+G+I+A LL++ T GL + TF LVY VY+TA DPK+GS+G IAP+AIG IVGANIL GPF G SMNP R+FGPA+ Sbjct: 8 AYGFGRADEATHPDSIRATLAEFLSTFVFVFAGEGSILALDKLYWDTAAHTGTNTPGGLVLVALAHALALFAAVSAAINVSGGHVNPAVTFAALIGGRISVIRAIYYWVAQLIGAILACLLLRLATNGLRPVGFHVASGVSELHGLLMEIILTFALVYVVYSTAIDPKRGSIGIIAPLAIGLIVGANILVGGPFDGASMNPARAFGPAL 216
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.422e-51 Identity = 96/200 (48.00%), Postives = 136/200 (68.00%), Query Frame = 1 Query: 112 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAV 711 GR +D+ + +A ++EF++T +FVFA GS ++ K+ D + P GLVA+++ H AL VAVA+ NISGGHVNPA+TFG LGG+++++ +FYW+AQLLG++VA+ LL++ TGG+ P TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNP R FGPA+ Sbjct: 15 GRSEDATHPDTIRAAISEFLATAIFVFAAEGSILSLGKLYQDMST-PGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAVVATLLLRLTTGGMRPPGFALASGVGDWHAVLLEATMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANMLAGGPFDGAGMNPARVFGPAL 213
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIPA_PHAVU (Probable aquaporin TIP-type alpha OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.425e-51 Identity = 100/207 (48.31%), Postives = 137/207 (66.18%), Query Frame = 1 Query: 91 STMAIAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAV 711 +T +FGR D++ S +A LAEF ST +FVFAG GS +A K+ D+A L+A+A+ H FALF AV+ ++SGGHVNPAV+FG +GG+I+++ ++YWIAQLLGSIVA+ +L++VT + + TFGL+YTVY TA DPK+G++ IAP+AIG IVGANIL GPF G MNP +FGP++ Sbjct: 2 ATRRYSFGRTDEATHPDSMRASLAEFASTFIFVFAGEGSGLALVKIYQDSAFSAGELLALALAHAFALFAAVSASMHVSGGHVNPAVSFGALIGGRISVIRAVYYWIAQLLGSIVAALVLRLVTNNMRPSGFHVSPGVGVGHMFILEVVMTFGLMYTVYGTAIDPKRGAVSYIAPLAIGLIVGANILVGGPFDGACMNPALAFGPSL 208
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.203e-50 Identity = 96/200 (48.00%), Postives = 133/200 (66.50%), Query Frame = 1 Query: 112 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAV 711 GR +D+ + +A ++EFI+T +FVFA GS ++ KM D + GLVA+A+ H AL VAVA+ NISGGHVNPAVTFG +GG+++++ + YW+AQLLG++ A+ LL++ TGG+ P TFGL+Y YAT DPK+G +GTIAP+A+GF++GAN+LA GPF G MNP R FGPA+ Sbjct: 14 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDMST-AGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGMRPPGFALASGVGDWHAVLLEAVMTFGLMYAYYATVIDPKRGHVGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPAL 212
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.738e-49 Identity = 102/210 (48.57%), Postives = 128/210 (60.95%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNFPD 732 I G ++ KA + EFI+T LFVFAGVGSA+A + + + + GL A+A+ H F + V ++ G +ISGGH+NPAVT GL LGG I++ YWI QLL S A FLL +TGG+ P H TF L++TVYAT DPKKGSL P+ GF+VGANILA G FSG SMNP RSFGPA+ SGN+ D Sbjct: 4 IELGHHSEAAKPDCIKALIVEFITTFLFVFAGVGSAMATDSLVGNTLV---GLFAVAVAHAFVVAVMISAG-HISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGGMGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYATIVDPKKGSLDGFGPLLTGFVVGANILAGGAFSGASMNPARSFGPALVSGNWTD 209
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.964e-49 Identity = 95/202 (47.03%), Postives = 129/202 (63.86%), Query Frame = 1 Query: 112 GRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAAL--DPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAV 711 GR +D+ + +A ++EFI+T +FVFA GS ++ KM D + GLVA+A+ H L VAVA+ N+SGGHVNPAVTFG +GG+++++ + YW AQLLG++ A+ LL++ TGG P TFG VY YAT DPK+G LGTIAP+A+GF++GAN+LA GPF G MNP R FGPA+ Sbjct: 16 GRSEDATHPDTIRAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGGARPPGFALASGVGDGHAVLLEAVMTFGFVYAYYATVVDPKRGHLGTIAPLAVGFLLGANVLAGGPFDGAGMNPARVFGPAL 217
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3) HSP 1 Score: 174.481 bits (441), Expect = 5.415e-43 Identity = 94/207 (45.41%), Postives = 121/207 (58.45%), Query Frame = 1 Query: 130 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLG--------TIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 FS + +AY AEF ST LFVF VGS I+ +T D D S L+A A+ F LF AV I A++SGGHVNPAVTF A+GG IT+ + IFYW +Q+LGS A +L ++ G AVPT TF +VYTV+ A DP+ G G + + +G + GA +LAAG +G SMNP RSFGPAV SG++ Sbjct: 12 FSPPALRAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFGLFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYISAGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVH-VAGDPRGGGFGGRKGPAATALGALVVGAVTGACVLAAGSLTGASMNPARSFGPAVVSGHY 217
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.058e-42 Identity = 91/196 (46.43%), Postives = 119/196 (60.71%), Query Frame = 1 Query: 139 GSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 G+ +A L+EF++T +FVFA GS KM D GL+ +A+ H AL AVA+ N SGGHVNPAVTFG+ +G +I+ YW AQLLG+++A LL++ +GG+ TFGLVYTVYATA D + G G IAP+AIG + GANILA GPF G +MNP R+FGPA+ N+ Sbjct: 26 GATRAALSEFVATAVFVFAAEGSVYGLWKMYRDTGT-LGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLLRLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGG-GDIAPLAIGLVAGANILAGGPFDGAAMNPARAFGPALVGWNW 219
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 4.584e-42 Identity = 94/211 (44.55%), Postives = 126/211 (59.72%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGG-LAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNFPD 732 +A G ++ G +A +AE + T LFVF+GVGSA+A K+ GL A+A H + V V+ G ++SGGH+NPAVT GLA GG IT+ Y AQLLGS +A LL +TGG AVP H TF L++ VYAT D ++ ++G + P+ +G +VGANILA GP+SG SMNP RSFGPA+A+G + D Sbjct: 4 LALGHHREATDPGCLRAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTI-MGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTGGEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVD-RRRAVGALGPLLVGLVVGANILAGGPYSGASMNPARSFGPALAAGEWAD 212 The following BLAST results are available for this feature:
BLAST of FC875627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875627 ID=FC875627; Name=FC875627; organism=Citrus clementina; type=EST; length=743bpback to top |