FC875627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.334e-41 Identity = 92/210 (43.81%), Postives = 122/210 (58.10%), Query Frame = 1 Query: 106 AFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLK-VVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNFPD 732 A G ++ G +A LAE I T LFVFAGVGSA+A K+ GL A+A+ H + V V+ G ++SGGH+NPAVT GLA G+IT+ Y AQLLGS +A LL + VP H TF L++ VYAT DP++ ++G + P+ +G +VGAN+LA GPFSG SMNP RSFGPA+ +G + D Sbjct: 5 ALGHHREASDAGCVRAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTLACLLLAFLAVADSGVPVHALGAGVGALRGVLMEAVLTFSLLFAVYATVVDPRR-AVGGMGPLLVGLVVGANVLAGGPFSGASMNPARSFGPALVAGVWAD 213
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP51_ARATH (Probable aquaporin TIP5-1 OS=Arabidopsis thaliana GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.742e-41 Identity = 88/204 (43.14%), Postives = 125/204 (61.27%), Query Frame = 1 Query: 115 RFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 +F S+ + + Y++EFIST FV A VGS ++ K+ A P G++ AI + AL +V I N+SGGHVNPAVTF +A+ G+I++ T +FYW +Q++ S++A +LKV VP + F LVYTV+ TA+DP++G + PI IGF+ GAN+LAAGPFSGGSMNP +FG A+ G+F Sbjct: 12 KFQGVLSMNALRCYVSEFISTFFFVLAAVGSVMSSRKLMAGDVSGPFGVLIPAIANALALSSSVYISWNVSGGHVNPAVTFAMAVAGRISVPTAMFYWTSQMIASVMACLVLKVTVMEQHVPIYKIAGEMTGFGASVLEGVLAFVLVYTVF-TASDPRRGLPLAVGPIFIGFVAGANVLAAGPFSGGSMNPACAFGSAMVYGSF 214
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP51_MAIZE (Aquaporin TIP5-1 OS=Zea mays GN=TIP5-1 PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.195e-39 Identity = 94/209 (44.98%), Postives = 120/209 (57.42%), Query Frame = 1 Query: 130 FSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSG-LVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVY--------ATAADPKKGSLGT-IAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 FS S ++YLAEFIST LFVF VGSAI+ +T +G LVA A+ F LF AV I A++SGGHVNPAVTF A+GG+I + + +FYW +QLLG+ A L + + G VPT TF LVYTV+ + D K+ T + +A+G GA +LAAG +G SMNP RSFGPAV SG+F Sbjct: 14 FSAPSLRSYLAEFISTFLFVFTAVGSAISARMLTTPDVTSSAGPLVATAVAQAFGLFAAVLIAADVSGGHVNPAVTFAYAIGGRIGVPSAMFYWASQLLGATFACLSLNLFSAGEEVPTTRIAVAMTGFGGAVLEGVLTFLLVYTVHVVGEREPRSRGGDGKREFAATALGALAVGLTQGAFVLAAGALTGASMNPARSFGPAVVSGHF 222
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP41_MAIZE (Aquaporin TIP4-1 OS=Zea mays GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 2.436e-35 Identity = 89/217 (41.01%), Postives = 117/217 (53.92%), Query Frame = 1 Query: 97 MAIAFGRFDDSFS------LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 MA + DSF +G +A LAE + T LFVF GV +A+A A+ + L A+AI H A V V G ++SGGH+NPAVT GL + G IT L + Y AQLL S A LL+ ++GG+ P H TF L++ YA DP + + I P+ G IVGAN LA G F+G SMNP RSFGPA+A+G++ Sbjct: 1 MAKLMNKLVDSFEHDEIPDVGCVRAVLAELVLTFLFVFTGVSAAMAAGSDGKPGDAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGLMVRGHITKLRAVLYVAAQLLASSAACVLLRFLSGGMVTPVHALGRGISPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRAIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPALATGDW 216
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 7.088e-35 Identity = 83/192 (43.23%), Postives = 106/192 (55.21%), Query Frame = 1 Query: 145 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASG 720 F+ L E + T LFVF GVG+A+ + T + L A+A+ + V G +ISGGHVNPAVT LA+GG +T+ Y AQ+L S A FLL+ +TGGLA P H TF L++ +YAT DP+K L P+ G +VGAN +A SG SMNP RSFGPAVASG Sbjct: 18 FRGVLGELVLTFLFVFIGVGAAMT-DGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGGLATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYATILDPRK-LLPGAGPLLTGLLVGANSVAGAALSGASMNPARSFGPAVASG 207
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP42_MAIZE (Aquaporin TIP4-2 OS=Zea mays GN=TIP4-2 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 9.258e-35 Identity = 83/196 (42.35%), Postives = 111/196 (56.63%), Query Frame = 1 Query: 136 LGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADA-ALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASG 720 +G +A LAE + T LFVF GV +++A A+ + L A+AI H A V V G ++SGGH+NPAVT G+ + G IT L + Y AQLL S +A LL+ ++GG+ P H TF L++ YA DP + + TI P+ G IVGAN LA G F+G SMNP RSFGPA+A+G Sbjct: 22 VGCVRAVLAELVLTFLFVFTGVSASMAAGAGGKPGEAMPMATLAAVAIAHALAAGVLVTAGFHVSGGHLNPAVTVGILVRGHITKLRALLYVAAQLLASSLACILLRYLSGGMVTPVHALGAGIRPMQGLVMEVILTFSLLFVTYAMILDP-RSQVRTIGPLLTGLIVGANSLAGGNFTGASMNPARSFGPAMATG 216
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP41_ORYSJ (Probable aquaporin TIP4-1 OS=Oryza sativa subsp. japonica GN=TIP4-1 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.209e-34 Identity = 84/195 (43.08%), Postives = 107/195 (54.87%), Query Frame = 1 Query: 139 GSFKAYLAEFISTLLFVFAGVGSAIAFN-KMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASG 720 G +A LAE + T +FVF GV + +A A AA+ + L +AI A V V G ++SGGH+NPAVT L G IT Y AQLL S +A LL+ +TGG+A P H TF L++ VYAT DP + S+ P+ G IVGAN +A G FSG SMNP RSFGPA+A+G Sbjct: 17 GCVRAVLAELVLTFVFVFTGVAATMAAGVPEVAGAAMPMAALAGVAIATALAAGVLVTAGFHVSGGHLNPAVTVALLARGHITAFRSALYVAAQLLASSLACILLRYLTGGMATPVHTLGSGIGPMQGLVMEIILTFSLLFVVYATILDP-RSSVPGFGPLLTGLIVGANTIAGGNFSGASMNPARSFGPALATG 210
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: TIP42_ORYSJ (Probable aquaporin TIP4-2 OS=Oryza sativa subsp. japonica GN=TIP4-2 PE=2 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.889e-33 Identity = 78/208 (37.50%), Postives = 109/208 (52.40%), Query Frame = 1 Query: 103 IAFGRFDDSFSLGSFKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVTGGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 + G +++ G +A E + T LFVF GV S I K A A + + + A A+ + V G ++SGGH+NPAVT LA+GG IT+ Y AQL GS +A LL+ +TGG A P H TF L+ + AT DP++ + P+ G +VGAN +A G +G SMNP RSFGPA+A+G + Sbjct: 9 LELGHRGEAWEPGCLRAVAGELLFTFLFVFIGVASTITAGK-AAGGAGEAAAVTAAAMAQALVVAVLATAGFHVSGGHLNPAVTLSLAVGGHITLFRSALYVAAQLAGSSLACLLLRCLTGGAATPVHALADGVGPVQGVAAEAVFTFTLLLVICATILDPRRAAPPGTGPLLTGLLVGANTVAGGALTGASMNPARSFGPALATGEW 215
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP4_MOUSE (Aquaporin-4 OS=Mus musculus GN=Aqp4 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 5.440e-27 Identity = 78/199 (39.20%), Postives = 110/199 (55.28%), Query Frame = 1 Query: 145 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 +KA AEF++TL+FV GVGS I + +D +V I++C G ++ V +ISGGH+NPAVT + +I+I +FY IAQ LG+I+ + +L +VT GGL V T TF LV+T++A+ + G+IA +AIGF V L A ++G SMNP RSFGPAV GN+ Sbjct: 35 WKAVSAEFLATLIFVLLGVGSTINWGGSENPLPVD---MVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIIAQCLGAIIGAGILYLVTPPSVVGGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNW 227
BLAST of FC875627 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.899e-25 Identity = 75/199 (37.69%), Postives = 107/199 (53.77%), Query Frame = 1 Query: 145 FKAYLAEFISTLLFVFAGVGSAIAFNKMTADAALDPSGLVAIAICHGFALFVAVAIGANISGGHVNPAVTFGLALGGQITILTGIFYWIAQLLGSIVASFLLKVVT-----GGLAVPTHNXXXXXXXXXXXXXXXXXTFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPXRSFGPAVASGNF 726 +KA AEF++ L+FV VGS I + +D +V I++C G ++ V +ISGGH+NPAVT + +I+I +FY AQ LG+I+ + +L +VT GGL V T TF LV+T++A+ + G+IA +AIGF V L A ++G SMNP RSFGPAV GN+ Sbjct: 38 WKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVD---MVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPNVVGGLGVTT--VHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTDVTGSIA-LAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMGNW 230 The following BLAST results are available for this feature:
BLAST of FC875627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 186
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875627 ID=FC875627; Name=FC875627; organism=Citrus clementina; type=EST; length=743bpback to top |