FC875628

Overview
NameFC875628
Unique NameFC875628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10281 contig Ccv1_Contig10281:1..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_VIBCH (Probable maleylacetoacetate isomerase OS=Vibrio cholerae GN=maiA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.334e-42
Identity = 92/215 (42.79%), Postives = 135/215 (62.79%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANI---VSSSIQPLQNLAVVKYIEEKAGA--DERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDA 679
            L L+ YWRSS ++RVRI LN+K L YE +AV+L +  GEQ   EF  +NP   +P L+DG+  ++ S AI+ YL+E YP P L+P   +R A  YQ   +   +++ I P+ NL +++Y+  K G   +E++ W +  I KGF  LE+ L+  AG+Y  G+ + L D+CL PQ+Y A  RF+LDM+++P L ++      LPAF  A PE QPDA
Sbjct:    4 LILYGYWRSSAAYRVRIALNIKQLVYESRAVHLSREGGEQHHAEFHRLNPSELIPVLIDGELCLNQSLAIIEYLDETYPAPRLIP---ERGAERYQVKALALDIAADIHPINNLRILQYLTAKLGVADEEKNRWYRHWIDKGFQGLEEKLRHTAGEYCVGNRLSLVDVCLVPQVYNA-ERFDLDMSRYPTLQQIAARLRALPAFAQAAPENQPDA 214          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_HUMAN (Maleylacetoacetate isomerase OS=Homo sapiens GN=GSTZ1 PE=1 SV=3)

HSP 1 Score: 170.244 bits (430), Expect = 9.098e-42
Identity = 93/210 (44.29%), Postives = 134/210 (63.81%), Query Frame = 2
Query:   62 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 685
            L+SY+RSSCS RVRI L LKG++Y+   +NL+K  G+QFS +F  +NP+  VP L      +  S AI+ YLEE  P P LLP D K++A     +++++  IQPLQNL+V+K +    G + +  WA+  I  GF ALE++L+  AG Y  GDEV +ADLCL PQ+ A   RF +D+T +P +  +++    L AFQ + P +QPD P+
Sbjct:    8 LYSYFRSSCSWRVRIALALKGIDYKTVPINLIKDRGQQFSKDFQALNPMKQVPTLKIDGITIHQSLAIIEYLEEMRPTPRLLPQDPKKRASVRMISDLIAGGIQPLQNLSVLKQV----GEEMQLTWAQNAITCGFNALEQILQSTAGIYCVGDEVTMADLCLVPQV-ANAERFKVDLTPYPTISSINKRLLVLEAFQVSHPCRQPDTPT 212          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI1_DROME (Probable maleylacetoacetate isomerase 1 OS=Drosophila melanogaster GN=CG9362 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.716e-40
Identity = 87/210 (41.43%), Postives = 130/210 (61.90%), Query Frame = 2
Query:   62 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK---GEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAP 682
            L+SYW SSCS RVR+ L +K ++Y+ K  +L+K   G  ++ E+ E+NP+  VP+L      + DS AI+ YLEE  PQP LLP D  ++A   +   ++ S IQPLQN++V+ +I    G D+   WA+  I +GF  LEK+L   AGK+  GDE+ +AD+CL PQ+  A  R+  D+T +P ++RL++   +L  F+   P  QPD P
Sbjct:   36 LYSYWPSSCSWRVRVALAIKKIDYDIKPTSLLKTVSGHAYTDEYREVNPMQKVPSLKIDGHTLCDSVAIIHYLEETRPQPALLPQDPVKRAKIREIVELICSGIQPLQNVSVLDHI----GKDQSLQWAQHWISRGFQGLEKVLSHSAGKFCVGDELSMADICLVPQVRNA-RRYKADLTPYPTIVRLNQELQELDVFKATHPSTQPDCP 240          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_PSEAE (Maleylacetoacetate isomerase OS=Pseudomonas aeruginosa GN=maiA PE=3 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35
Identity = 92/216 (42.59%), Postives = 132/216 (61.11%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVK--GEQFSPEFLEINPIGYVPAL-VDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDI--WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPSS 688
            +KL++Y+RS+ S+RVRI L LKGL+Y+   VNL++  GE   P +L +NP G VPAL VD   ++  S AI+ YLEE+YPQP LL SD  R+A     A +V   I PL N +V+  + +  G DE  +  W    +G+G AA+E+L+ D    +  GD   LAD+ L PQLYAA  RF + +  +P + R+ +  +  PAF+ A P  QPD P++
Sbjct:    1 MKLYTYYRSTSSYRVRIALALKGLDYQSLPVNLIRDGGEHRQPAYLALNPQGRVPALQVDEGELLIQSPAIIEYLEERYPQPALLSSDPLRRARERGVAALVGCDIHPLHNASVLNLLRQ-WGHDEEQVRQWIGHWVGQGLAAVEQLIGDQG--WCFGDRPGLADVYLVPQLYAA-ERFGVALDAWPRIRRVADLAAAHPAFRQAHPANQPDTPAA 212          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_EMENI (Maleylacetoacetate isomerase OS=Emericella nidulans GN=maiA PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.154e-28
Identity = 78/219 (35.62%), Postives = 124/219 (56.62%), Query Frame = 2
Query:   62 LFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALV-------DGDFVVSDSFAILMYLEEKYPQ--PPLLP--SDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEKQPDAPS 685
            L++Y+RSSCS R+RI L L+ + Y    +NL+KGEQ S +   +NP   VP L+            ++ S A L YL+E +P    PLLP  S+ +++A+    A+I++  IQP+ NL +++ +    G D R  W+K  I  GFAA E + +D AG ++ GD + +AD+CL P ++ A  R  +++ Q+P + R+ EA  K  A +      Q D P+
Sbjct:   11 LYTYFRSSCSARLRIALALRSISYTSVPINLLKGEQSSTKNTAVNPSATVPTLIIEHVDRSQSPITITQSLAALEYLDEAFPDNPNPLLPPISNPQQRALVRSLASIIACDIQPVTNLRILQRV-APFGVD-RAAWSKDLIEAGFAAYEAIARDSAGVFSVGDTITMADVCLIPAVWGA-ERAGVNLGQYPTIKRVAEALEKENAVKEGHWRTQQDTPT 226          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: MAAI_RHIME (Maleylacetoacetate isomerase OS=Rhizobium meliloti GN=maiA PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 85/214 (39.72%), Postives = 120/214 (56.07%), Query Frame = 2
Query:   50 NMLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPAL-VDGDFVVSDSFAILMYLEEKYPQPPLLPS---DLKR-KAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADE--RDIWAKTHIGKGFAALEKLLKDYA-GKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPEK 667
            N   L+ YWRSS S+RVRI LNL G  Y    V+L+     +PE L  NP G VP L +DG+  ++ S AI+ YL E      LLP+   D +R +A++Y     V+  I P+ NL VV  +   AG  E  R  W +  IG+G AA E++L   A G +  GD   +ADLCL PQ+Y A  R+++D+   PLL+ +    + + AFQ A P++
Sbjct:    3 NETVLYDYWRSSASYRVRIALNLCGEAYRSVPVDLLAKAHRAPEHLARNPQGLVPVLDIDGE-RLTQSLAIIEYLAETRDGTGLLPAHPIDRQRVRALSY----AVAMDIHPVCNLGVVARVMAGAGDGEAARREWMQKFIGEGLAAFERMLDHPATGAFCHGDRPTMADLCLVPQVYNA-RRWDVDLAACPLLVAIDRRCAGIDAFQRAHPDR 210          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT7_DROME (Glutathione S-transferase D7 OS=Drosophila melanogaster GN=GstD7 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.145e-14
Identity = 55/185 (29.73%), Postives = 91/185 (49.19%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKY--PQPPLLPSD-LKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFP 601
            L L+++  +  S  +++     GLE   K +N ++G+Q  PEF+ INP   +P LVD  FV+ +S AI +YL EKY  P  PL P+D  KR  IN +    + +    L     + +   K G  E    A   +   F  L   L+     +  G ++ +AD+ +   + + V  F+ D+++FP
Sbjct:    4 LDLYNFPMAPASRAIQMVAKALGLELNSKLINTMEGDQLKPEFVRINPQHTIPTLVDNGFVIWESRAIAVYLVEKYGKPDSPLYPNDPQKRALINQRLYFDMGTLYDALTKYFFLIFRTGKFGDQE----ALDKVNSAFGFLNTFLE--GQDFVAGSQLTVADIVILATV-STVEWFSFDLSKFP 181          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT3_DROME (Glutathione S-transferase D3 OS=Drosophila melanogaster GN=GstD3 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 53/177 (29.94%), Postives = 93/177 (52.54%), Query Frame = 2
Query:  122 GLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKY-PQPPLLPSDLKRKAINYQAANIVSSSIQP-LQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNL---DMTQFPLLLRLHEAYSKL 637
            GLE+  K +N +KGEQ +P+F++INP   +P LVD  F + +S AIL+YL EKY     L P D++++A+  Q      + + P L N     +   + G++E        + + F  L   L+     Y  GD+  +AD+     + A V+ F++   D++++P + R ++   K+
Sbjct:    7 GLEFNKKIINTLKGEQMNPDFIKINPQHSIPTLVDNGFTIWESRAILVYLVEKYGKDDALYPKDIQKQAVINQRLYFDMALMYPTLANYYYKAFTTGQFGSEE----DYKKVQETFDFLNTFLE--GQDYVAGDQYTVADIA----ILANVSNFDVVGFDISKYPNVARWYDHVKKI 173          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT1_MUSDO (Glutathione S-transferase 1 OS=Musca domestica GN=Gst1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 58/164 (35.37%), Postives = 85/164 (51.83%), Query Frame = 2
Query:  122 GLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ-PPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRF---NLDMTQFP 601
            G+E   K +NL  GE   PEFL+INP   +P LVDGDF + +S AI++YL EKY +   L P   K++A+  Q       ++           I  KA AD  +++ K  I   F  L   LK +  +YA GD + +ADL     L A+V+ F   + D +++P
Sbjct:   23 GIELNKKLLNLQAGEHLKPEFLKINPQHTIPTLVDGDFALWESRAIMVYLVEKYGKTDSLFPKCPKKRAVINQRLYFDMGTLYKSFADYYYPQIFAKAPADP-ELFKK--IETAFDFLNTFLKGH--EYAAGDSLTVADLA----LLASVSTFEVASFDFSKYP 177          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTA_RHILE (Protein gstA OS=Rhizobium leguminosarum GN=gstA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.977e-12
Identity = 60/201 (29.85%), Postives = 96/201 (47.76%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLPSDLKRKAINYQAANIVSSSIQ--PLQNLAVVKYIEEKAGADER--DIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAF 646
            +KL+ +  S  +HR  + L+L G+ YE   V+L  G   +P+FL++NP G VP L D   V++DS AIL+YL  KY +   LP +    A   +  ++ +  I   P     V  +     GAD R  ++ A+ H  +  A +E  L   A ++  GD   +AD+ L   + A     N+D + +  +         LP F
Sbjct:    1 MKLYHHPLSGHAHRAHLFLSLLGVPYELVEVDLAAGAHKAPDFLKLNPFGQVPVLDDNGTVIADSSAILVYLARKYGRTDWLPEEAVAAARIQKWLSVAAGEIAYGPCAARLVTVF-----GADFRTDEVIARAH--RILALVEAELG--ARRFLLGDNATIADIALYSYI-ANAPEGNVDTSAYQAVRAWLARIEALPGF 191          
The following BLAST results are available for this feature:
BLAST of FC875628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
MAAI_VIBCH5.334e-4242.79Probable maleylacetoacetate isomerase OS=Vibrio ch... [more]
MAAI_HUMAN9.098e-4244.29Maleylacetoacetate isomerase OS=Homo sapiens GN=GS... [more]
MAAI1_DROME1.716e-4041.43Probable maleylacetoacetate isomerase 1 OS=Drosoph... [more]
MAAI_PSEAE1.272e-3542.59Maleylacetoacetate isomerase OS=Pseudomonas aerugi... [more]
MAAI_EMENI1.154e-2835.62Maleylacetoacetate isomerase OS=Emericella nidulan... [more]
MAAI_RHIME1.842e-2639.72Maleylacetoacetate isomerase OS=Rhizobium meliloti... [more]
GSTT7_DROME6.145e-1429.73Glutathione S-transferase D7 OS=Drosophila melanog... [more]
GSTT3_DROME5.202e-1329.94Glutathione S-transferase D3 OS=Drosophila melanog... [more]
GSTT1_MUSDO1.977e-1235.37Glutathione S-transferase 1 OS=Musca domestica GN=... [more]
GSTA_RHILE1.977e-1229.85Protein gstA OS=Rhizobium leguminosarum GN=gstA PE... [more]

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Properties
Property NameValue
Genbank descriptionC31401A09EF CTVClemen1 Citrus clementina cDNA clone C31401A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875628 ID=FC875628; Name=FC875628; organism=Citrus clementina; type=EST; length=696bp
GAATCTGCAGTGCTTGTGTAGTCTGGTTAGAGACAGAACCTGTTGATAAA
ACATGCTGAAACTGTTTTCATACTGGAGGAGTTCATGCTCACATCGTGTC
AGAATTGGTCTCAACTTGAAAGGGTTAGAATATGAGTACAAAGCAGTTAA
CTTGGTGAAAGGAGAGCAATTCAGTCCTGAGTTTTTGGAGATCAACCCTA
TTGGCTACGTGCCGGCTTTGGTTGATGGAGATTTTGTTGTATCTGATTCT
TTTGCCATTTTAATGTACCTGGAAGAGAAGTATCCTCAGCCTCCATTGTT
GCCTTCTGATCTTAAGAGAAAAGCTATCAATTATCAGGCTGCAAATATTG
TTTCCTCGAGCATACAGCCTCTTCAGAATCTTGCTGTAGTGAAGTACATT
GAGGAAAAAGCTGGTGCAGATGAGAGAGACATCTGGGCTAAAACTCACAT
TGGAAAAGGCTTTGCGGCACTTGAGAAGCTGCTAAAAGACTATGCTGGGA
AATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTGTCTGGCACCA
CAGCTTTATGCAGCGGTCAACAGGTTCAACCTTGACATGACCCAATTCCC
TCTTTTGCTGAGGTTGCATGAGGCATACAGCAAGCTACCGGCATTTCAAA
ATGCTGTACCAGAAAAACAACCGGATGCCCCTTCATCATGAAGTAT
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