FC875628

Overview
NameFC875628
Unique NameFC875628
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10281 contig Ccv1_Contig10281:1..696. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT2_HUMAN (Glutathione S-transferase theta-2 OS=Homo sapiens GN=GSTT2 PE=1 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 2.582e-12
Identity = 66/183 (36.07%), Postives = 93/183 (50.82%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPP-LLPSDLKRKA-----INYQAANI-----VSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALE-KLLKDYAGKYATGDEVFLADLCLAPQLYAAV 568
            L+LF    S  S  V I     G+  E + V+LVKG+  S EFL+IN +G +P L DGDF++++S AIL+YL  KY  P    PSDL+ +A     + + A  I     +   +Q L  L  V+  EEK    ER+   +T + +    LE K L D    +  G +V LADL    +L   V
Sbjct:    3 LELFLDLVSQPSRAVYIFAKKNGIPLELRTVDLVKGQHKSKEFLQINSLGKLPTLKDGDFILTESSAILIYLSCKYQTPDHWYPSDLQARARVHEYLGWHADCIRGTFGIPLWVQVLGPLIGVQVPEEKV---ERN---RTAMDQALQWLEDKFLGD--RPFLAGQQVTLADLMALEELMQPV 177          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT4_MUSDO (Glutathione S-transferase 4 OS=Musca domestica GN=Gst4 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.404e-12
Identity = 54/167 (32.34%), Postives = 86/167 (51.50%), Query Frame = 2
Query:  122 GLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKY--PQPPLLPSDLKRKA-INYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLR 613
            G+E   K + L +G    PEFL+INP   +P LVD  F + +S AI++YL EKY     PL PS  K++A IN +    + +  Q   N    ++ E+K    + +++ K  +   F  L   L +   KYA GD + LADL L   + +     N+D++++  + R
Sbjct:   23 GIELNKKLLKLFEGGHLKPEFLKINPQHTIPTLVDNGFALWESRAIMVYLVEKYGKQDDPLYPSCPKKRALINQRLYFDMGTLYQGFANYFYPQFKEKKPA--DPELFKKFEVTLDF--LNTFLSE--SKYAAGDSLTLADLALLASV-STFEAVNIDVSKYEHIAR 182          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: SSPA_HAEDU (Stringent starvation protein A homolog OS=Haemophilus ducreyi GN=sspA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12
Identity = 57/185 (30.81%), Postives = 85/185 (45.95%), Query Frame = 2
Query:   50 NMLKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPPLLP--------SDLKRKAIN---YQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVN 571
            +++ LFS      SH+VRI L  KG+ YE + +N       S +FLE+NP   +P LVD D V+ +S  I+ YL+E++P PPL+P        S L    I    Y   +IV+ + +  +    +  + E+  A          +G  FAA           Y   DE  L D  +AP L+   N
Sbjct:    9 SVMSLFSDKNDIYSHQVRIVLAEKGVPYELENIN---PNTISEDFLELNPYANIPTLVDRDLVLFNSRIIMEYLDERFPHPPLMPVYPVLRGKSRLTMHRIEQDWYSLIDIVNKNPESKEAKKALSQLREEMLA----------LGSVFAAT---------SYFMSDEFSLVDCYIAPLLWRMHN 171          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.281e-11
Identity = 72/223 (32.29%), Postives = 96/223 (43.05%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ--PPLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEK--AGADERDIWAKTHIGKGFAALEKLLKDY-----AGKYATGDEVFLADL--CLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLPAFQNAVPE-KQPDAPSS 688
            LKL+    S    RV   LN KGL++E   V+L  G    P+FL +NP G +PALVDGD V+ +S AI  Y+  KY      LLP+      +      + S    P  +  V + +      GA +  +     + K    L K+L  Y       KY  GDE  LAD    L P L +A       +   P +    EA +  PAFQ  V     P  PSS
Sbjct:    4 LKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKLEVW-LEVESHHFHPNASPLVFQLLVRPLLGGAPDAAV-----VEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWEAIAARPAFQKTVAAIPLPPPPSS 220          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT4_RAT (Glutathione S-transferase theta-4 OS=Rattus norvegicus GN=Gstt4 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 53/169 (31.36%), Postives = 84/169 (49.70%), Query Frame = 2
Query:   56 LKLFSYWRSSCSHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPP-LLPSDLKRKAINYQAANIVSSSIQ-PLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGK------YATGDEVFLADL 538
            L+L+    S+    V I     G+ ++++ V+L+KG   S E++EINP+  VP+L DG F++S+S AIL YL  KY  P    P DL  +A   +      ++IQ P+  +  +K I      +E        + K    + K +K +  K      + TGD + LADL
Sbjct:    3 LELYMDLLSAPCRAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKVPSLRDGKFILSESVAILCYLCRKYSAPSHWYPPDLHMRARVDEFMAWQHTAIQVPMSKILWIKLIIPMITGEE---VPTERLDKTLDEVNKNIKQFEEKFLQDKLFITGDHISLADL 168          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT2_MUSDO (Glutathione S-transferase 2 OS=Musca domestica GN=Gst2 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.186e-11
Identity = 55/172 (31.98%), Postives = 89/172 (51.74%), Query Frame = 2
Query:  122 GLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKY--PQPPLLPSDLKRKA-INYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDY--AGKYATGDEVFLADLCLAPQLYAAVNRFN---LDMTQFPLLLR 613
            G+E   K +NL +GE   PEFL+INP   +P LVD  F + +S AI++YL EKY     PL PS  K++A IN +    + +  +   +    ++ E K         A   + K F +  + L  +    KYA G+ + LADL     + A+V+ F+   +D++++  +LR
Sbjct:   23 GIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENKP--------ADPELFKKFESALEFLNIFLSQSKYAAGETMTLADLA----ILASVSTFDVVQMDLSKYEHILR 182          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 55/160 (34.38%), Postives = 81/160 (50.62%), Query Frame = 2
Query:   89 SHRVRIGLNLKGLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQ--PPLLPSDLKRKAINYQAANIVSSSIQ-PLQNLAVVKYIEEKAG--ADERDI-WAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAP 550
            S R  + L  KG+ +E   V+L+KGEQ  PE+L I P G +P LVDGD+ + +S AI+ Y+ EKY    P LL   ++ +    Q  ++ ++S   PL  L +        G  ADE+ I  ++  + +     E  L     +Y  GD V LADL   P
Sbjct:   13 SKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLS--KNEYLAGDFVSLADLAHLP 170          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GST1B_ANOGA (Glutathione S-transferase 1, isoform B OS=Anopheles gambiae GN=GstD1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.855e-11
Identity = 56/177 (31.64%), Postives = 83/177 (46.89%), Query Frame = 2
Query:  122 GLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQP----PLLPSDLKRKAINYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCLAPQLYAAVNRFNLDMTQFPLLLRLHEAYSKLP 640
            G+E   K  +L+KGE   PEFL++NP   VP LVD  F + +S AI+ YL EKY +P     L P+D +++AI  Q       ++           I E A A+E +      IG+  A L+  L+      A G+   LAD+     LYA +  F +    F   + +   Y  +P
Sbjct:   23 GVELNLKLTDLMKGEHMKPEFLKLNPQHCVPTLVDSGFALWESRAIMCYLVEKYGKPCNNDSLYPTDPQKRAIVNQRLYFDMGTLYQRFGDYYYPQIFEGAPANEANF---AKIGEALAFLDTFLEG-ERFVAGGNGYSLADI----SLYATLTTFEVAGYDFSAYVNVLRWYKSMP 191          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT3_MUSDO (Glutathione S-transferase 3 OS=Musca domestica GN=Gst3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.728e-11
Identity = 55/172 (31.98%), Postives = 88/172 (51.16%), Query Frame = 2
Query:  122 GLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKY--PQPPLLPSDLKRKA-INYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDY--AGKYATGDEVFLADLCLAPQLYAAVNRFN---LDMTQFPLLLR 613
            G+E   K +NL +GE   PEFL+INP   +P LVD  F + +S AI++YL EKY     PL PS  K++A IN +    + +  +   +    ++ E K         A   + K F +  + L  +    KYA G  + LADL     + A+V+ F+   +D++++  +LR
Sbjct:   23 GIELNKKLLNLFEGEHLKPEFLKINPQHTIPTLVDNGFAMWESRAIMVYLVEKYGKQNDPLYPSCPKKRALINQRLYFDMGTLWKSYADYTYPQFRENKP--------ADPELFKKFESALEFLNIFLSQSKYAAGQTMTLADLA----ILASVSTFDVVQMDLSKYEHILR 182          
BLAST of FC875628 vs. ExPASy Swiss-Prot
Match: GSTT2_DROME (Glutathione S-transferase D2 OS=Drosophila melanogaster GN=GstD2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.869e-11
Identity = 48/143 (33.57%), Postives = 77/143 (53.85%), Query Frame = 2
Query:  122 GLEYEYKAVNLVKGEQFSPEFLEINPIGYVPALVDGDFVVSDSFAILMYLEEKYPQPP-LLPSDLKRKA-INYQAANIVSSSIQPLQNLAVVKYIEEKAGADERDIWAKTHIGKGFAALEKLLKDYAGKYATGDEVFLADLCL 544
            GLE   K +N ++GEQ  PEF+++NP   +P LVD  F + +S AI +YL EKY +   LLP+D K++A IN +    + +  +         +   K G+DE D+     I   F  L+  L+    +Y  GD++ +AD+ +
Sbjct:   23 GLELNKKLLNTMEGEQLKPEFVKLNPQHTIPTLVDNGFSIWESRAIAVYLVEKYGKDDYLLPNDPKKRAVINQRLYFDMGTLYESFAKYYYPLFRTGKPGSDE-DL---KRIETAFGFLDTFLE--GQEYVAGDQLTVADIAI 159          
The following BLAST results are available for this feature:
BLAST of FC875628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
GSTT2_HUMAN2.582e-1236.07Glutathione S-transferase theta-2 OS=Homo sapiens ... [more]
GSTT4_MUSDO4.404e-1232.34Glutathione S-transferase 4 OS=Musca domestica GN=... [more]
SSPA_HAEDU9.811e-1230.81Stringent starvation protein A homolog OS=Haemophi... [more]
GSTF3_MAIZE1.281e-1132.29Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTT4_RAT2.186e-1131.36Glutathione S-transferase theta-4 OS=Rattus norveg... [more]
GSTT2_MUSDO2.186e-1131.98Glutathione S-transferase 2 OS=Musca domestica GN=... [more]
GSTF3_ARATH2.855e-1134.38Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GST1B_ANOGA2.855e-1131.64Glutathione S-transferase 1, isoform B OS=Anophele... [more]
GSTT3_MUSDO3.728e-1131.98Glutathione S-transferase 3 OS=Musca domestica GN=... [more]
GSTT2_DROME4.869e-1133.57Glutathione S-transferase D2 OS=Drosophila melanog... [more]

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Properties
Property NameValue
Genbank descriptionC31401A09EF CTVClemen1 Citrus clementina cDNA clone C31401A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875628 ID=FC875628; Name=FC875628; organism=Citrus clementina; type=EST; length=696bp
GAATCTGCAGTGCTTGTGTAGTCTGGTTAGAGACAGAACCTGTTGATAAA
ACATGCTGAAACTGTTTTCATACTGGAGGAGTTCATGCTCACATCGTGTC
AGAATTGGTCTCAACTTGAAAGGGTTAGAATATGAGTACAAAGCAGTTAA
CTTGGTGAAAGGAGAGCAATTCAGTCCTGAGTTTTTGGAGATCAACCCTA
TTGGCTACGTGCCGGCTTTGGTTGATGGAGATTTTGTTGTATCTGATTCT
TTTGCCATTTTAATGTACCTGGAAGAGAAGTATCCTCAGCCTCCATTGTT
GCCTTCTGATCTTAAGAGAAAAGCTATCAATTATCAGGCTGCAAATATTG
TTTCCTCGAGCATACAGCCTCTTCAGAATCTTGCTGTAGTGAAGTACATT
GAGGAAAAAGCTGGTGCAGATGAGAGAGACATCTGGGCTAAAACTCACAT
TGGAAAAGGCTTTGCGGCACTTGAGAAGCTGCTAAAAGACTATGCTGGGA
AATATGCAACTGGAGATGAAGTTTTCCTGGCAGATTTGTGTCTGGCACCA
CAGCTTTATGCAGCGGTCAACAGGTTCAACCTTGACATGACCCAATTCCC
TCTTTTGCTGAGGTTGCATGAGGCATACAGCAAGCTACCGGCATTTCAAA
ATGCTGTACCAGAAAAACAACCGGATGCCCCTTCATCATGAAGTAT
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