FC875636

Overview
NameFC875636
Unique NameFC875636
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length502
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10284 contig Ccv1_Contig10284:1..502. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: CDCH_HALSA (Protein cdcH OS=Halobacterium salinarium GN=cdcH PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 2.316e-25
Identity = 63/158 (39.87%), Postives = 92/158 (58.23%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKAVA E  ANFI++    + SKW GE EK ++  F  A ++AP+V+F DE+DS+   R   G +    ++ N+ +   DGL  ++ E V+V+AATNRP  +D A++R  R  R + V  P    RE+I+++      LA+DV L      ADGY GS
Sbjct:  513 AKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGL--EEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTPLAADVSLRELAERADGYVGS 668          

HSP 2 Score: 90.8929 bits (224), Expect = 3.581e-18
Identity = 56/159 (35.22%), Postives = 96/159 (60.38%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN-PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKAVA E  A+F +I+   I SK++GE E+ ++ +F  A   +PS++F+DE+DS+  +RE+  GE E  R++  + +   DGL  + + +V+V+AATNR   +D A+ R  R  R + + +PD   RE+I+++      L+ DV+L    +   G+ G+
Sbjct:  240 AKAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKREDVTGEVE--RRVVAQLLTMMDGL--EGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMPLSDDVNLSTLADDTHGFVGA 394          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: VPS4B_PONAB (Vacuolar protein sorting-associated protein 4B OS=Pongo abelii GN=VPS4B PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 3.024e-25
Identity = 66/158 (41.77%), Postives = 96/158 (60.76%), Query Frame = 2
Query:    2 AKAVATEAG-ANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVRRLPRRLMVNLPDAPNREKIIRVIL-AKEELASDVDLEGNCNMADGYSGS 469
            AKAVATEA  + F +IS S + SKW GE EK VK +F LA +  PS++F+DE+DS+ G R +  E EA R++K EF+V   G+   D + +LVL ATN P+ LD A+ RR  +R+ + LP+   R  + ++ L   +   ++ D        DGYSG+
Sbjct:  184 AKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLCGSR-SENESEAARRIKTEFLVQMRGVGV-DNDGILVLGATNIPWVLDSAIRRRFEKRIYIPLPEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGA 339          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: SAV_SULAC (Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE=3 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 9.729e-24
Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGSXSKTCV 487
            AKAVATE+GANFI +    I SKW GE EK ++ +F  A + AP+V+F DE+DS+   R    +     ++ N+ +   DG+   +K  V+++AATNRP  LD A++R  R  R + V  PD   R +I++V      LA DV LE     A+GY+G+  +  V
Sbjct:  538 AKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNK--VVIIAATNRPDILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVPLAEDVSLEDIAEKAEGYTGADLEALV 699          

HSP 2 Score: 99.3673 bits (246), Expect = 1.007e-20
Identity = 57/159 (35.85%), Postives = 96/159 (60.38%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRREN-PGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            A+A+A E GA FI ++   I SK++GE E+ ++ +F  A + APS++F+DE+D++  +RE+  GE E  +++  + +   DG+  K + RV+V+ ATNRP  +D A+ R  R  R + +  PD   R+ I++V      +  DVDL+    M  GY+G+
Sbjct:  263 ARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKREDVTGEVE--KRVVAQLLTLMDGI--KGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVDLDKLAEMTYGYTGA 417          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: VAT_THEAC (VCP-like ATPase OS=Thermoplasma acidophilum GN=vat PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 1.271e-23
Identity = 59/158 (37.34%), Postives = 92/158 (58.23%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKAVATE+ ANFI+I    + SKW GE EK ++ +F  A ++AP++VF+DE+DS+  RR    +     ++ N+ + + DG+   +   V+V+ ATNRP  +D A++R  R  + + +  PD   R  I++V      LA DVDL       +GY G+
Sbjct:  518 AKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMN--GVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGA 673          

HSP 2 Score: 90.8929 bits (224), Expect = 3.581e-18
Identity = 48/132 (36.36%), Postives = 86/132 (65.15%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRV 391
            A+AVA E+GANF++I+   I SK++G+ E+ ++ +FS A + APS++F+DE+DS+  +RE   + E  R++  + +   DG+  K++  V+V+ ATNR   +D A+ R  R  R + + +PD   R++I+ +
Sbjct:  241 ARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREEV-QGEVERRVVAQLLTLMDGM--KERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRNGRKEILMI 369          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.167e-23
Identity = 60/158 (37.97%), Postives = 94/158 (59.49%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKAVA E+GANFI++    I SKW GE EK ++ +F  A + AP ++F DE+D++  +R          K+ N+ +   DG+  ++ + V+V+AATNRP  +D A++R  RL R ++V +PD   R  I ++      LA DV+LE      +GY+G+
Sbjct:  503 AKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGM--EEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGA 658          

HSP 2 Score: 102.834 bits (255), Expect = 9.106e-22
Identity = 59/158 (37.34%), Postives = 97/158 (61.39%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKAVA EAGANF  I+   I SK+ GE E+ ++ +F  A + APS++F+DE+D++  +R+     E  R++  + +   DGL  K + +V+V+ ATNRP  LD A+ R  R  R +++ +PD   R++I+++      LA DVDL+   ++  G+ G+
Sbjct:  230 AKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDE-ATGEVERRLVAQLLTLMDGL--KGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGA 384          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: CDC48_EMENI (Cell division control protein 48 OS=Emericella nidulans GN=cdc48 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.831e-23
Identity = 65/160 (40.62%), Postives = 92/160 (57.50%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENP--GEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKAVA E  ANFI++    + S WFGE E  ++ +F  A   AP VVF+DE+DS+   R         A  ++ N+ +   DG+ +  K+ V V+ ATNRP  LD A+VR  RL   + V LPD  +RE I++  L K  +ASDVD+E   +   G+SG+
Sbjct:  554 AKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTS--KKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHGFSGA 711          

HSP 2 Score: 95.1301 bits (235), Expect = 1.899e-19
Identity = 58/158 (36.71%), Postives = 88/158 (55.70%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            A+AVA E GA F  I+   I SK  GE E  ++  F  A K +P+++F+DE+DS+  +RE     E  R++ ++ +   DG+  K +  V+V+AATNRP  +D A+ R  R  R + + +PD   R +I+ +     +L  DVDLE       GY GS
Sbjct:  280 ARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKT-NGEVERRVVSQLLTLMDGM--KARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVDLETIAAETHGYVGS 434          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: CDAT_PLAF7 (Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate 3D7) GN=PF07_0047 PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 2.831e-23
Identity = 55/158 (34.81%), Postives = 92/158 (58.23%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKA+A E  ANFI++    + + WFGE E  V+ +F  A   +P ++F DE+DS+   R +   ++A  ++ N+ +   DG+   +K+ + ++AATNRP  LD+A+ R  RL + + ++LPD  +R  I + IL    L  DVD+       +G+SG+
Sbjct:  985 AKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGI--NEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTEGFSGA 1140          

HSP 2 Score: 88.1965 bits (217), Expect = 2.321e-17
Identity = 55/158 (34.81%), Postives = 87/158 (55.06%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKA+A E+ A    I+   I SK  GE E+ ++ +F  AS+  P ++F+DE+DS+  +R +   +E  +++ ++ +   DGL  K    VLVLAATNRP  +D A+ R  R  R + + +PD   R +I+     K +L  DV+L        GY G+
Sbjct:  578 AKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKR-SKSNNELEKRVVSQLLTLMDGL--KKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYVGA 732          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: TERA_RAT (Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus GN=Vcp PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGE-HEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKA+A E  ANFI+I    + + WFGE E  V+ +F  A + AP V+F DE+DS+   R  N G+   A  ++ N+ +   DG+ T  K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R  I++  L K  +A DVDLE    M +G+SG+
Sbjct:  528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGA 685          

HSP 2 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            A+AVA E GA F  I+   I SK  GE E  ++  F  A K AP+++F+DE+D++  +RE     E  R++ ++ +   DGL  K +  V+V+AATNRP  +D A+ R  R  R + + +PDA  R +I+++     +LA DVDLE   N   G+ G+
Sbjct:  255 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGA 409          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: TERA_PIG (Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1 SV=5)

HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGE-HEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKA+A E  ANFI+I    + + WFGE E  V+ +F  A + AP V+F DE+DS+   R  N G+   A  ++ N+ +   DG+ T  K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R  I++  L K  +A DVDLE    M +G+SG+
Sbjct:  528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGA 685          

HSP 2 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            A+AVA E GA F  I+   I SK  GE E  ++  F  A K AP+++F+DE+D++  +RE     E  R++ ++ +   DGL  K +  V+V+AATNRP  +D A+ R  R  R + + +PDA  R +I+++     +LA DVDLE   N   G+ G+
Sbjct:  255 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGA 409          
BLAST of FC875636 vs. ExPASy Swiss-Prot
Match: TERA_MOUSE (Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp PE=1 SV=4)

HSP 1 Score: 105.916 bits (263), Expect = 1.076e-22
Identity = 63/160 (39.38%), Postives = 95/160 (59.38%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSML-GRRENPGE-HEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            AKA+A E  ANFI+I    + + WFGE E  V+ +F  A + AP V+F DE+DS+   R  N G+   A  ++ N+ +   DG+ T  K+ V ++ ATNRP  +D A++R  RL + + + LPD  +R  I++  L K  +A DVDLE    M +G+SG+
Sbjct:  528 AKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMST--KKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGA 685          

HSP 2 Score: 99.7525 bits (247), Expect = 7.709e-21
Identity = 60/158 (37.97%), Postives = 92/158 (58.23%), Query Frame = 2
Query:    2 AKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVVFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVVR--RLPRRLMVNLPDAPNREKIIRVILAKEELASDVDLEGNCNMADGYSGS 469
            A+AVA E GA F  I+   I SK  GE E  ++  F  A K AP+++F+DE+D++  +RE     E  R++ ++ +   DGL  K +  V+V+AATNRP  +D A+ R  R  R + + +PDA  R +I+++     +LA DVDLE   N   G+ G+
Sbjct:  255 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREKT-HGEVERRIVSQLLTLMDGL--KQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGA 409          
The following BLAST results are available for this feature:
BLAST of FC875636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 348
Match NameE-valueIdentityDescription
CDCH_HALSA2.316e-2539.87Protein cdcH OS=Halobacterium salinarium GN=cdcH P... [more]
VPS4B_PONAB3.024e-2541.77Vacuolar protein sorting-associated protein 4B OS=... [more]
SAV_SULAC9.729e-2439.63Protein SAV OS=Sulfolobus acidocaldarius GN=sav PE... [more]
VAT_THEAC1.271e-2337.34VCP-like ATPase OS=Thermoplasma acidophilum GN=vat... [more]
Y1156_METJA2.167e-2337.97Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
CDC48_EMENI2.831e-2340.63Cell division control protein 48 OS=Emericella nid... [more]
CDAT_PLAF72.831e-2334.81Putative cell division cycle ATPase OS=Plasmodium ... [more]
TERA_RAT1.076e-2239.38Transitional endoplasmic reticulum ATPase OS=Rattu... [more]
TERA_PIG1.076e-2239.38Transitional endoplasmic reticulum ATPase OS=Sus s... [more]
TERA_MOUSE1.076e-2239.38Transitional endoplasmic reticulum ATPase OS=Mus m... [more]

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Properties
Property NameValue
Genbank descriptionC31401B07EF CTVClemen1 Citrus clementina cDNA clone C31401B07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875636 ID=FC875636; Name=FC875636; organism=Citrus clementina; type=EST; length=502bp
TGCGAAGGCTGTTGCAACTGAGGCTGGTGCAAACTTTATCAACATATCCA
TGTCAAGCATTACTTCTAAGTGGTTTGGTGAAGGAGAGAAGTATGTTAAA
GCAGTCTTCTCTCTGGCCAGTAAAATTGCTCCAAGTGTTGTTTTTGTTGA
TGAGGTTGACAGCATGTTAGGAAGACGGGAAAATCCAGGGGAGCATGAAG
CTATGCGTAAAATGAAGAATGAATTCATGGTTAACTGGGATGGTTTGCGC
ACAAAGGATAAAGAACGAGTTCTGGTACTTGCTGCTACCAATAGGCCTTT
TGACCTTGATGAGGCTGTTGTTAGGAGGCTTCCAAGGAGATTGATGGTTA
ACTTGCCAGATGCCCCAAACAGAGAAAAGATTATAAGAGTTATCTTGGCC
AAAGAAGAATTGGCATCTGATGTGGATTTGGAAGGAAATTGCAACATGGC
TGATGGGTACTCTGGAAGTGANTCTAAGACCTGTGTGTGACTGCCGCACA
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