FC875659
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: RBM38_XENTR (RNA-binding protein 38 OS=Xenopus tropicalis GN=rbm38 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.879e-11 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 100 RCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 327 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGDIDEAVVITDRQTGKSRGYGFVTMSDRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: RBM38_MOUSE (RNA-binding protein 38 OS=Mus musculus GN=Rbm38 PE=2 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 100 RCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 327 + FVGGL + TTD+SL + F +GDI E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 33 KIFVGGLPYHTTDASLRKYFEGFGDIEEAVVITDRQTGKSRGYGFVTMADRAAADRACKDPN-PIIDGRKANVNLA 107
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: RBM24_DANRE (RNA-binding protein 24 OS=Danio rerio GN=rbm24 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.760e-11 Identity = 36/76 (47.37%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 100 RCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 327 + FVGGL + TTDSSL + F +G+I E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDSSLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRSAADRACKDPN-PIIDGRKANVNLA 86
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: RBY1A_MOUSE (RNA-binding motif protein, Y chromosome, family 1 member A1 OS=Mus musculus GN=Rbmy1a1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.910e-11 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 76 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEAQ 330 MA + + F+GGL T +L E FG +G + ++ DRET +SRGF F+TFR ++A++ MNG LDG+ I V +A+ Sbjct: 1 MAETNQPGKIFIGGLNIKTRQKTLQEIFGRFGPVARVILMRDRETKKSRGFAFLTFRRLADAKNAVKEMNGVILDGKRIKVKQAR 85
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe GN=SPBC660.15 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 100 RCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 327 + F+GGL W TTD SL + F +G++L+ ++ D TGRSRGFGF+TF++ K + + + +LDG+ I A Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMS--KEHHLDGKIIDPKRA 237
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: RBM24_HUMAN (RNA-binding protein 24 OS=Homo sapiens GN=RBM24 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 35/76 (46.05%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 100 RCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITVNEA 327 + FVGGL + TTD+SL + F +G+I E+ +I DR+TG+SRG+GFVT D + A + N +DGR VN A Sbjct: 12 KIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPN-PIIDGRKANVNLA 86
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: RMXL3_PANTR (RNA-binding motif protein, X-linked-like-3 OS=Pan troglodytes GN=RBMXL3 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 76 MASGDVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNLDGRNITV 318 M D + FVGGL T + +L FG YG I++ +I DR+T +SRGF FVTF + A MNG+ LDG+ I V Sbjct: 1 MMEADRPEKLFVGGLNLKTDEKALKAEFGKYGHIIKVFLIKDRKTNKSRGFAFVTFESPADAKAAARDMNGKYLDGKAIMV 81
BLAST of FC875659 vs. ExPASy Swiss-Prot
Match: RB27C_DROME (Heterogeneous nuclear ribonucleoprotein 27C OS=Drosophila melanogaster GN=Hrb27C PE=1 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 1 Query: 88 DVEFRCFVGGLAWATTDSSLHEAFGAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNG-QNLDGRNI 312 D + FVGGL+W TT +L F +GDI++ ++ + E+GRSRGFGFVTF D ++ ++ NG LDGR I Sbjct: 4 DERGKLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVTFADPTNVNHVLQ--NGPHTLDGRTI 77 The following BLAST results are available for this feature:
BLAST of FC875659 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 58
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875659 ID=FC875659; Name=FC875659; organism=Citrus clementina; type=EST; length=696bpback to top |