FC875664

Overview
NameFC875664
Unique NameFC875664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.119e-18
Identity = 54/153 (35.29%), Postives = 77/153 (50.33%), Query Frame = 1
Query:   76 FAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            FA  G+    ++AL G+H++G  HC K+ +RLY       VDP +N D+V  +   CP  I DP+    +  D  TP   DN YY+N+   KGL   D  L TD R++P V   A +   F + F  ++  L      TG+ G IR+ C   N
Sbjct:  180 FAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNI-DPRVA--INMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFTDSRSKPTVDLWANNGQLFNQAFISSMIKLGRVGVKTGSNGNIRRDCGAFN 329          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.461e-18
Identity = 53/170 (31.18%), Postives = 88/170 (51.76%), Query Frame = 1
Query:   22 LEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDP----ALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            +E  L   N +   ++  F + G+    +VAL+G+H++G +HC +   R++ + D      +NP +   +   C +   D +   +  ND  TP   DN YY+N+    GL+  DH +A D RTR  V   A+ +  FF  F++A+  +SE N  TG  GE+R+ C+  N
Sbjct:  155 VEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSDQNGPVEMNPKYAAELRKLCANYTNDEQMSAF--NDVFTPGKFDNMYYKNLKHGYGLLQSDHAIAFDNRTRSLVDLYAEDETAFFDAFAKAMEKVSEKNVKTGKLGEVRRRCDQYN 322          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 52/166 (31.33%), Postives = 86/166 (51.81%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP   DS +V  ++F+A+G++   LV L+G H++G   C    +RL+       DP ++P  +  +  +CP        V     D G+    D +YY N+   +G++  D  L TD  TRP V+++   +  F  EF+R++  +S    +TG  GEIR+VC+  N
Sbjct:  166 LPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCPQNGDGSVRVDL---DTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.909e-18
Identity = 56/178 (31.46%), Postives = 87/178 (48.88%), Query Frame = 1
Query:    1 RKSRAEILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            R S    ++  LP    + + +   F+  G+    ++AL G+H++G  HC K+  R+Y       +DP++N  +V  +   CP  +    A+     D  +P   DN Y++N+   KGL   D  L TD+R+R  V   A S+  F + F  AIT L     LTG  GEIR+ C+  N
Sbjct:  151 RISTKASVQSQLPQPEFNLNQLNGMFSRHGLSQTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINM---DPTSPRTFDNAYFKNLQQGKGLFTSDQILFTDQRSRSTVNSFANSEGAFRQAFITAITKLGRVGVLTGNAGEIRRDCSRVN 325          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 2.493e-18
Identity = 58/182 (31.87%), Postives = 97/182 (53.30%), Query Frame = 1
Query:    1 RKSRAEILEQY---LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            R SR+  L Q    +P  N++   +L +F   G+D   LVAL GSH++G + C     RLY +      D  L      ++  +CP +  D         D  +    DN+Y++N++++KGL+  D  L ++++++R  VKK A+ Q  FF++F+ ++  +   +PLTG+ GEIRK C   N
Sbjct:  152 RDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVL---DIISAASFDNSYFKNLIENKGLLNSDQVLFSSNEKSRELVKKYAEDQGEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 330          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.256e-18
Identity = 52/168 (30.95%), Postives = 93/168 (55.36%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP+ ++    +  RF+  G++   LVAL GSH++G + C     RLY +      D  L   +   +  +CP +  D    +   N  G     DN+Y++N++++ GL+  D  L ++++++R  VKK A+ Q+ FF++F+ ++  + + +PLTG+ GEIRK C   N
Sbjct:  171 LPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGR---FDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQEEFFEQFAESMIKMGKISPLTGSSGEIRKKCRKIN 335          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER29_ARATH (Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=2 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 5.553e-18
Identity = 53/168 (31.55%), Postives = 84/168 (50.00%), Query Frame = 1
Query:   19 ILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL--YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQ--YVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCN 510
            + +  LP         L  FA  G+     VA++G+H++G THC  ++ R          ++P     +   CP+  P  +A +  +V ND+ T ++ D  YY + +  +G + +D ++  D RTRP+V+  A  QD FF  FS A   LS    LTG +G IR VC+
Sbjct:  170 VADSELPPSTADVDTTLSLFANKGMTIEESVAIMGAHTIGVTHCNNVLSRFDNANATSENMDPRFQTFLRVACPEFSPTSQAAEATFVPNDQ-TSVIFDTAYYDDAIAGRGNLRIDSEIGADPRTRPFVEAFAADQDRFFNAFSSAFVKLSSYKVLTGNEGVIRSVCD 336          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 9.472e-18
Identity = 62/168 (36.90%), Postives = 83/168 (49.40%), Query Frame = 1
Query:   70 ERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANK---LHD 531
            + FA +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  178 DAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSFADGTQKFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 340          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.599e-17
Identity = 64/191 (33.51%), Postives = 92/191 (48.17%), Query Frame = 1
Query:    1 RKSRAEILEQYLPDHNDSRSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANK---LHD 531
            R++  ++    LP  + +   +   FA +G++ P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    PLTGT+GEIR  C + N    LHD
Sbjct:  136 RQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDF---DLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSLLHD 321          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 52/169 (30.77%), Postives = 82/169 (48.52%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLA--TDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP   +  + +  +F A+G+    +V+L G+H+ GR  CV   +RL+        DP LN   +  +   CP    +         D  TP   DNNY+ N+  + GL+  D +L   T   T P V   A +Q  FF+ F +++  +   +PLTG+ GEIR+ C + N
Sbjct:  169 LPSPFEGLNNITSKFVAVGLKTTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQ---NGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVN 334          
The following BLAST results are available for this feature:
BLAST of FC875664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER51_ARATH1.119e-1835.29Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER6_ARATH1.461e-1831.18Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER71_ARATH1.909e-1831.33Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER45_ARATH1.909e-1831.46Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER49_ARATH2.493e-1831.87Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER14_ARATH3.256e-1830.95Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER29_ARATH5.553e-1831.55Peroxidase 29 OS=Arabidopsis thaliana GN=PER29 PE=... [more]
PER1B_ARMRU9.472e-1836.90Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER1C_ARMRU3.599e-1733.51Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER54_ARATH4.701e-1730.77Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31401E01EF CTVClemen1 Citrus clementina cDNA clone C31401E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875664 ID=FC875664; Name=FC875664; organism=Citrus clementina; type=EST; length=707bp
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGA
CAGCAGGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCACGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAGCAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
ATCCTTTCTGAGAACAACCCTCTCACCGGTACAAAGGGTGAGATCAGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATCTGCTGCAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTT
CTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTCCCAATAGATGGTTTT
TCTAGATGGGTTTGTTTCCTGTAAGATGTTCGTGTTACTACTACTATGTC
CNTTAGA
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