FC875664

Overview
NameFC875664
Unique NameFC875664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11
Identity = 49/163 (30.06%), Postives = 71/163 (43.56%), Query Frame = 1 
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVC 507
            LP    + S + + F   G+    LVAL G H++G  HC    +RL+      EVDP LNP     +   CP       A     N  GT    DN YY+ ++  K L   D  L     T+  V K A S + F + F +++  +S    ++G   E+R  C
Sbjct:  157 LPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCPAHNTVKNAGS---NMDGTVTSFDNIYYKMLIQGKSLFSSDESLLAVPSTKKLVAKYANSNEEFERAFVKSMIKMSS---ISGNGNEVRLNC 313
The following BLAST results are available for this feature:
BLAST of FC875664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER64_ARATH8.587e-1130.06Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31401E01EF CTVClemen1 Citrus clementina cDNA clone C31401E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875664 ID=FC875664; Name=FC875664; organism=Citrus clementina; type=EST; length=707bp
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGA
CAGCAGGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCACGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAGCAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
ATCCTTTCTGAGAACAACCCTCTCACCGGTACAAAGGGTGAGATCAGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATCTGCTGCAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTT
CTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTCCCAATAGATGGTTTT
TCTAGATGGGTTTGTTTCCTGTAAGATGTTCGTGTTACTACTACTATGTC
CNTTAGA
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