FC875664

Overview
NameFC875664
Unique NameFC875664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:526..1233. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 59/166 (35.54%), Postives = 82/166 (49.40%), Query Frame = 1
Query:   76 FAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANK---LHD 531
            F  +G+D P  LVAL G+H+ G+  C  ++ RLY        DP LN  ++  +  +CP        V +   D  TP+V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    P TGT+G+IR  C + N    LHD
Sbjct:  183 FKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDF---DLRTPLVFDNKYYVNLKEQKGLIQSDQELFSSPNATD--TIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSLLHD 343          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.047e-16
Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKS--QDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP    + + + + FAA  +D   LV L   H++G +HC     RLY         ++DP L   ++  +  KC     +   V+    D G+    D  Y++N+   +GL   D +L T+  TR YV++ A    +D FF +F+ ++  +     LTG++GEIRK CN+ N
Sbjct:  158 LPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEM---DPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 56/170 (32.94%), Postives = 82/170 (48.24%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP    + + +   FA +G++ P  LVAL G H+ G+  C  +  RLY        DP+LNP ++  +   CP    +      V  D  TP   D  YY N+L+ KGL+  D  L +     T P V + + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  167 LPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVN 333          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16
Identity = 51/172 (29.65%), Postives = 85/172 (49.42%), Query Frame = 1
Query:   25 EQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDR-GTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANK 522
            +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY +      DPAL P +   +   CP         + V  D   TP V DN Y+++++  +G +  D  L T+  TR YVK  ++ QD FF+ F+  +  L +    +G  GEIR  C + N+
Sbjct:  156 DDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCPLG-----GDENVTGDLDATPQVFDNQYFKDLVSGRGFLNSDQTLYTNLVTREYVKMFSEDQDEFFRAFAEGMVKLGDLQ--SGRPGEIRFNCRVVNR 320          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 54/156 (34.62%), Postives = 78/156 (50.00%), Query Frame = 1
Query:   76 FAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            FA +G++ P  LVAL G H+ GR  C+ +  RLY        DP LNP ++  +   CP    +      V  D  TP   DN +Y N+ + KGL+  D +L +     T P V   + +   FF  F+ A+  +    PLTGT+GEIR+ C + N
Sbjct:  152 FADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPR---NGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVN 304          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 56/176 (31.82%), Postives = 83/176 (47.16%), Query Frame = 1
Query:    7 SRAEILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            S A  +   LP  N+  + + + FA   +    ++AL  +H++G  HC K+ +R+Y       VDP LN  +   +   CP  + DP+    +  D  TP   DN Y++N+   KGL   D  L TD R++P V   AK+   F K F  A+T L      T   G IR+ C   N
Sbjct:  157 STAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTV-DPRIA--INMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFTDGRSKPTVNDWAKNSVAFNKAFVTAMTKLGRVGVKTRRNGNIRRDCGAFN 329          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP   D+   +   F+  G++   LVAL G+H++G++ C     RLY E    ++         +CP    D         D  TP   DNNYY+N++  KGL++ D  L  +   T   V + +K++  F  +F+ A+  +    PLTG+ GEIRK+C+  N
Sbjct:  163 LPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLY-ENSSDIDAGFASTRKRRCPTVGGDGNLAAL---DLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGSGASTDGIVSEYSKNRSKFAADFATAMIKMGNIEPLTGSNGEIRKICSFVN 321          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.788e-16
Identity = 54/180 (30.00%), Postives = 88/180 (48.89%), Query Frame = 1
Query:    1 RKSRAEILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHR--LYPE-----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            R S A  +   + D + +   ++  F++ G+    LV L G+H++G  HC     R  L P+     +D +L+  +   +++KC  ++     V  V ND  T    DN YY+N+L  KGL   D  L  D RTR  V+ +A  Q+ FF  ++ +   +S      G +GEIR+ C+  N
Sbjct:  152 RVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVHDLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTV--VDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDDRTRKIVEILANDQESFFDRWTESFLKMSLMGVRVGEEGEIRRSCSAVN 329          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 58/204 (28.43%), Postives = 91/204 (44.61%), Query Frame = 1
Query:   16 EILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAI--------PD------------------------PKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLA 516
            +  E  LP  + + SV+L+RF+  G +    V+L G+HS+G THC    +RLY      + DP LNP  +  +  KCP ++        PD                         + +    N+ G        Y+R ++ +KGLM  D QL   + T  +V+  A     F +EF+ ++  LS  N LTG  G++R  C+ A
Sbjct:  197 DFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGSEVTEMWVRAYASDPLLFRREFAMSMMKLSSYNVLTGPLGQVRTSCSKA 400          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.866e-16
Identity = 54/171 (31.58%), Postives = 87/171 (50.88%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAI----PDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP  + S    +  F + G++   +  LLGSHS+GRTHC  +V RLY      +  P +N   +  M  +CP        DP  + Y+  D G+     +++Y  IL +K ++ VD QL  +  T+   K+ ++  + F K F+ +++ +   N LT T+GEIRK C   N
Sbjct:  167 LPSPSISWDQAMSYFKSRGLNVLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDP--LVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYNDDTKQISKEFSEGFEDFRKSFALSMSKMGAINVLTKTEGEIRKDCRHIN 335          
The following BLAST results are available for this feature:
BLAST of FC875664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER33_ARATH3.047e-1635.54Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER1_ORYSJ3.047e-1630.23Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER23_ARATH3.980e-1632.94Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER17_ARATH3.980e-1629.65Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PERE5_ARMRU6.788e-1634.62Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER73_ARATH6.788e-1631.82Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER5_ARATH6.788e-1631.29Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER18_ARATH6.788e-1630.00Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER48_ARATH8.866e-1628.43Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER26_ARATH8.866e-1631.58Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31401E01EF CTVClemen1 Citrus clementina cDNA clone C31401E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875664 ID=FC875664; Name=FC875664; organism=Citrus clementina; type=EST; length=707bp
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGA
CAGCAGGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCACGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAGCAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
ATCCTTTCTGAGAACAACCCTCTCACCGGTACAAAGGGTGAGATCAGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATCTGCTGCAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTT
CTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTCCCAATAGATGGTTTT
TCTAGATGGGTTTGTTTCCTGTAAGATGTTCGTGTTACTACTACTATGTC
CNTTAGA
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