FC875664

Overview
NameFC875664
Unique NameFC875664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.158e-15
Identity = 53/156 (33.97%), Postives = 77/156 (49.36%), Query Frame = 1
Query:   76 FAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            FA +G++    LVAL G H+ GR  C  +  RLY        DP+LNP ++  +   CP    +      V  D  TP   D+ YY N+ + KGL+  D +L +     T P V + +     FF+ F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  181 FADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQ---NGNGTVLVNFDVVTPDAFDSQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNQYSSDMSVFFRAFIDAMIRMGNLRPLTGTQGEIRQNCRVVN 333          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 49/162 (30.25%), Postives = 82/162 (50.62%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            +P  + S S ++  F+A+G+    +VAL G+H++G++ CV    R+Y E +  +N          CP A     A      D  +    DN+Y++N++  +GL+  D  L     T   V+  + S   F  +F+ A+  + + +PLTG+ GEIRKVC   N
Sbjct:  138 IPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCVNFRARVYNETN--INAAFATLRQRSCPRAAGSGDA-NLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFNGGSTDSIVRGYSNSPSSFNSDFAAAMIKMGDISPLTGSSGEIRKVCGKTN 296          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 51/165 (30.91%), Postives = 80/165 (48.48%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVC 507
            +P   +  S +  +F+A+G++   LVAL G+H+ GR  C    +RL+        DP LN   +  +   CP    +  A      D  TP   DNNY+ N+  + GL+  D +L       T   V   A +Q  FF+ F++++  +   +PLTG+ GEIR  C
Sbjct:  138 IPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQ---NGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDC 299          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 48/162 (29.63%), Postives = 79/162 (48.77%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            +P    S S ++  F+A+G+    +VAL G+H++G++ C     R+Y E +  +N          CP A            D  T    DNNY++N++  +GL+  D  L     T   V+  + +   F  +F+ A+  + + +PLTG+ GEIRKVC   N
Sbjct:  166 IPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRASGSGDG-NLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFNGGSTDSIVRGYSNNPSSFNSDFTAAMIKMGDISPLTGSSGEIRKVCGRTN 324          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 54/178 (30.34%), Postives = 81/178 (45.51%), Query Frame = 1
Query:    1 RKSRAEILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            R S    ++  LP  +     +   FA  G+    ++AL G+H++G  HC K   R+Y       +DP LN  +   +   CP  +    A+     D  +P   DN Y++N+    GL   D  L +D+R+R  V   A S+  F + F  AIT L      TG  GEIR+ C+  N
Sbjct:  149 RLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINM---DPTSPNTFDNAYFKNLQKGMGLFTSDQVLFSDERSRSTVNSFASSEATFRQAFISAITKLGRVGVKTGNAGEIRRDCSRVN 323          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 59/166 (35.54%), Postives = 79/166 (47.59%), Query Frame = 1
Query:   76 FAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANK---LHD 531
            F  +G+D P  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP        V +   D  TP V DN YY N+ + KGL+  D +L     ATD  T P V+  A     FF  F  A+  +    P TGT+G+IR  C + N    LHD
Sbjct:  182 FRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNRSALVDF---DLRTPTVFDNKYYVNLKERKGLIQSDQELFSSPNATD--TIPLVRAYADGTQTFFNAFVEAMNRMGNITPTTGTQGQIRLNCRVVNSNSLLHD 342          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 5.747e-15
Identity = 52/176 (29.55%), Postives = 84/176 (47.73%), Query Frame = 1
Query:    4 KSRAEILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANKLH 528
            +S+A  +   +P  N +   +   F   G     +VAL G+H++G +HC +   RLY    D  +NP     +   C +   D     +  ND  TP   DN Y++N+    GL+  DH L  D  T+P+V   A ++  FF++F+RA+  L          GE+R+ C+  N L+
Sbjct:  160 ESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAF--NDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNLN 333          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 54/170 (31.76%), Postives = 85/170 (50.00%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMA-KSQDYFFKEFSRAITILSENNPLTGTK--GEIRKVCNLAN 519
            +P      + +LE F + G++   LV L G+H++G+  C  +  RLY        DP+++  +  ++  +C        A + V  D  TP V DN YY N+    G++  D +L  D RT P VK  A +S   F ++F+ ++  L     LTG    GEIRKVC+ +N
Sbjct:  182 VPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCR------WASETVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDPRTAPLVKTFAEQSPQIFRQQFAVSMAKLVNVGVLTGEDRVGEIRKVCSKSN 345          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 48/167 (28.74%), Postives = 83/167 (49.70%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPE----VDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP  +DS ++   +F+A  ++   LV L+G  H++G   C  + +R++       DP ++   VP +   CP        V     D G+    D +Y+ N+  ++G++  DH L T   TR  V++    +  F  +F+R++  +S     TGT GEIR+VC+  N
Sbjct:  156 LPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDL---DTGSGNTFDTSYFINLSRNRGILQSDHVLWTSPATRSIVQEFMAPRGNFNVQFARSMVKMSNIGVKTGTNGEIRRVCSAVN 319          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 53/176 (30.11%), Postives = 80/176 (45.45%), Query Frame = 1
Query:    7 SRAEILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            S A  +E  LP  +D+   +   F    +    ++AL  +H++G  HC K+  R++       VDP LN  +   +   CP  + DP+    +  D  TP   DN Y++N+   KGL   D  L TD R+RP V   A +   F + F  A+T L        + G IR+ C   N
Sbjct:  157 STASSVEGNLPGPSDNVDKLNALFTKNKLTQEDMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNV-DPRIA--INMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFTDGRSRPTVNAWASNSTAFNRAFVIAMTKLGRVGVKNSSNGNIRRDCGAFN 329          
The following BLAST results are available for this feature:
BLAST of FC875664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER22_ARATH1.158e-1533.97Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PERP7_BRARA1.512e-1530.25Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PERA2_ARMRU1.975e-1530.91Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER52_ARATH1.975e-1529.63Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER16_ARATH1.975e-1530.34Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER34_ARATH4.400e-1535.54Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER65_ARATH5.747e-1529.55Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER7_ARATH7.505e-1531.76Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER62_ARATH7.505e-1528.74Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER35_ARATH7.505e-1530.11Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31401E01EF CTVClemen1 Citrus clementina cDNA clone C31401E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875664 ID=FC875664; Name=FC875664; organism=Citrus clementina; type=EST; length=707bp
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGA
CAGCAGGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCACGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAGCAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
ATCCTTTCTGAGAACAACCCTCTCACCGGTACAAAGGGTGAGATCAGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATCTGCTGCAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTT
CTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTCCCAATAGATGGTTTT
TCTAGATGGGTTTGTTTCCTGTAAGATGTTCGTGTTACTACTACTATGTC
CNTTAGA
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