FC875664

Overview
NameFC875664
Unique NameFC875664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER2_HORVU (Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 50/156 (32.05%), Postives = 79/156 (50.64%), Query Frame = 1
Query:   58 SVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANK 522
            S ++  FA   +D   LV+L G+H+ G  HC     R      +PA++      + +KC    P     Q +  D  TP V DN YY +++  +GL   D  L     T+    + + +Q  FF++F+R++T +S  + LTGTKGEIR  C + N+
Sbjct:    1 STLISSFANRSLDVADLVSLSGAHTFGVAHCPAFEDRSSRVRHNPAIDGKFATALRNKCSGDNPSGTLTQKL--DVRTPDVFDNKYYFDLIARQGLFKSDQGLIDHPTTKRMATRFSLNQGAFFEQFARSMTKMSNMDILTGTKGEIRNNCAVPNR 154          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 7.505e-15
Identity = 58/168 (34.52%), Postives = 82/168 (48.81%), Query Frame = 1
Query:   70 ERFAAIGID-APGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-----ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLANK---LHD 531
            + F  +G++ +  LVAL G H+ G+  C  ++ RLY        DP LN  ++  +   CP    +      V  D  TP + DN YY N+ + KGL+  D +L     ATD  T P V+  A S   FF  F  A+  +    PLTGT+G+IR  C + N    LHD
Sbjct:  180 DSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCP---LNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQELFSSPNATD--TIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNSNSLLHD 342          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 9.802e-15
Identity = 49/170 (28.82%), Postives = 87/170 (51.18%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP------EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP   DS  ++  +F+   +D   LVAL G+H+ GR  C  + +RL+       + DP++ P+ +  +  +CP              D  +P   DN+Y++N+ +++G++  D  L  +T   T   V + A++Q+ FF  F+R++  +     LTG +GEIR+ C   N
Sbjct:  163 LPLGPDSLEILTSKFSVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQG---GDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFFTNFARSMIKMGNVRILTGREGEIRRDCRRVN 329          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 48/168 (28.57%), Postives = 81/168 (48.21%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQ-DYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP   ++ S ++ +F + G+D   LV L G H++G  HC ++ +RLY      + DP L+ ++   +  KC            +  D G+    D +Y++ +   +GL   D  L  ++ T+ YV K   S    FFK+F  ++  +     LTG  GE+RK C + N
Sbjct:  166 LPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPT----DTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.672e-14
Identity = 50/155 (32.26%), Postives = 83/155 (53.55%), Query Frame = 1
Query:   76 FAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEV-----DPALNPDHVPHM-LHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKK-MAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            FA  G+D   LV L G+H++G +HC    +RLY        DPAL+ ++  ++   KCP ++ D K +  V  D G+    D +YY+ +L  +GL   D  L T+  T   + + +  S   FF EF++++  +   N  TG+ G +R+ C++AN
Sbjct:  174 FANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCP-SLNDNKTI--VEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVAN 325          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 48/162 (29.63%), Postives = 74/162 (45.68%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            +P    S S ++ +F A G+    +VAL G+H++G+  C     R+Y E +  ++          CP A            D  TP   DN YY+N+++ KGL+  D  L     T   VK    +   F  +F   +  + +  PLTG++GEIRK C   N
Sbjct:  163 IPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIYNETN--IDSSFAKTRQASCPSASGSGDN-NLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYNGGSTDSTVKTYVNNPKTFTSDFVAGMIKMGDITPLTGSEGEIRKSCGKVN 321          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 52/171 (30.41%), Postives = 85/171 (49.71%), Query Frame = 1
Query:   19 ILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY---PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL-ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            I ++ LP+   S + + E F   G++   LVAL G+H++G+  C+    RLY    ++D   +         +CP    D         D+ TP   DNNYYRN++  KGL+  D  L  T   T   V + +++   F  +FS A+  + +   LTG+ G+IR++C+  N
Sbjct:  152 IADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFSSTR----KRRCPVNGGDTTLAPL---DQVTPNSFDNNYYRNLMQKKGLLESDQVLFGTGASTDSIVTEYSRNPSRFASDFSAAMIKMGDIQTLTGSDGQIRRICSAVN 315          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 53/156 (33.97%), Postives = 75/156 (48.08%), Query Frame = 1
Query:   76 FAAIGIDAPG-LVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKR--TRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            FA +G++ P  LVAL G H+ GR  C  +  RLY        DP L+P ++  +   CP    +      V  D  TP   D  YY N+ + KGL+  D +L +     T P V   + +   FF  F  A+  +    PLTGT+GEIR+ C + N
Sbjct:  181 FADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQ---NGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVN 333          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.184e-14
Identity = 49/169 (28.99%), Postives = 80/169 (47.34%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQL--ATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP   ++ + + ++F  +G++   LVAL G+H+ GR  C     RL+        DP LN  ++  +   CP              D  TP   DNNY+ N+  ++GL+  D +L   +   T   V   + +Q  FF+ F +++  +   +PLTG+ GEIR  C   N
Sbjct:  162 LPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQG---GSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.852e-14
Identity = 50/171 (29.24%), Postives = 87/171 (50.88%), Query Frame = 1
Query:   22 LEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            L+  LP    S S  +  F   G++    VALLG+H+VG+ +C     R+         DP+++P  V  + + C ++            D+ +P+  DN +++ I   +G++ VD +LA+D +TR  V + A +  +F ++F RA+  +   + LTG  GEIR+ C   N
Sbjct:  150 LDVTLPGPTISVSGAVSLFTNKGMNTFDAVALLGAHTVGQGNCGLFSDRITSFQGTGRPDPSMDPALVTSLRNTCRNSAT-------AALDQSSPLRFDNQFFKQIRKRRGVLQVDQRLASDPQTRGIVARYANNNAFFKRQFVRAMVKMGAVDVLTGRNGEIRRNCRRFN 313          
The following BLAST results are available for this feature:
BLAST of FC875664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER2_HORVU7.505e-1532.05Peroxidase 2 (Fragment) OS=Hordeum vulgare PE=2 SV... [more]
PER1A_ARMRU7.505e-1534.52Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER58_ARATH9.802e-1528.82Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER56_ARATH1.672e-1428.57Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER3_ARATH1.672e-1432.26Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER4_VITVI2.184e-1429.63Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER4_ARATH2.184e-1430.41Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER3_ARMRU2.184e-1433.97Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER15_IPOBA2.184e-1428.99Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER57_ARATH2.852e-1429.24Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31401E01EF CTVClemen1 Citrus clementina cDNA clone C31401E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875664 ID=FC875664; Name=FC875664; organism=Citrus clementina; type=EST; length=707bp
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGA
CAGCAGGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCACGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAGCAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
ATCCTTTCTGAGAACAACCCTCTCACCGGTACAAAGGGTGAGATCAGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATCTGCTGCAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTT
CTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTCCCAATAGATGGTTTT
TCTAGATGGGTTTGTTTCCTGTAAGATGTTCGTGTTACTACTACTATGTC
CNTTAGA
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