FC875664

Overview
NameFC875664
Unique NameFC875664
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length707
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 9.175e-13
Identity = 51/176 (28.98%), Postives = 83/176 (47.16%), Query Frame = 1
Query:   22 LEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP-----EVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFF-----KEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            L + +P+ +DS  ++  +F   G++A  LV L  +H++G T C  +  RLY      + DP +NP  +P +  +CP    +      +  DR +  + D    +NI D   ++  D  L  D  TR  V       + FF      +F +AI  + +    TG KGEIR+VC+  N
Sbjct:  154 LAKDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQ---NGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLYEDVTTRQVVDSYLGMLNPFFGPTFESDFVKAIVKMGKIGVKTGFKGEIRRVCSAFN 326          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 45/158 (28.48%), Postives = 71/158 (44.94%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVC 507
            LP    S   +L  +    ++   +VAL G+H++G+  C      +Y + +  +N      +   CP A     +      D  TP   DN YY N+L  KGL+  D +L     T   V+  A S   F   F+ A+  +   +P TGT+G+IR+ C
Sbjct:  164 LPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIYNDTN--INSAFAASLRANCPRA----GSTALAPLDTTTPNAFDNAYYTNLLSQKGLLHSDQELFNSGSTDSTVRSFASSTSAFNSAFATAMVKMGNLSPQTGTQGQIRRSC 315          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 49/165 (29.70%), Postives = 76/165 (46.06%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-YPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATD--KRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP   ++ + +  +F  + +D+  LVAL G+H+ G++ C     RL     D  LNP +   +   C           +V  D  TP   D NYY N+  + G +  D  L +   + T   V   A SQ+ FF+ F +++  +    PLTG +GEIR  C   N
Sbjct:  133 LPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQACSSGRDT-----FVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFESFGQSMINMGNIQPLTGNQGEIRSNCRRLN 292          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 53/180 (29.44%), Postives = 83/180 (46.11%), Query Frame = 1
Query:    1 RKSRAEILEQYLPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLT--GTKGEIRKVCNLAN 519
            R S A    + LP    + + + + FA   +D   LVAL G+H++G  HC     RL       + DP+LNP +   +  +C D          V  D   P+  D+ Y+ ++L +KGL   D  L TD  +  ++  + ++   F  +F R++  +S    LT     GEIRK C L N
Sbjct:  172 RVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDP-SAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGDQGGEIRKNCRLVN 350          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 45/162 (27.78%), Postives = 81/162 (50.00%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            +P    + S ++ RF A G+    +VAL G+H++GR  CV   +R+Y   +  ++          CP A       +    D  +P   D+ +Y+ +L  KGL+  D  L  +  T   V   + + + F+++F+RA+  + + +PLTG+ G+IR+ C   N
Sbjct:  158 IPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCVTFRNRIYNASN--IDTSFAISKRRNCP-ATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIAYSHNLNAFYRDFARAMIKMGDISPLTGSNGQIRQNCRRPN 316          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.565e-12
Identity = 46/154 (29.87%), Postives = 70/154 (45.45%), Query Frame = 1
Query:   58 SVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            S ++  F+  G     LV L G+H++G+  C     R+Y E +  ++P +   +   CP    D     +   D  TP   DN YY N+ + KGL+  D QL     T   V   + +   F  +F  A+  +   +PLTGT G+IR  C   N
Sbjct:  168 SGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYNESN--IDPTYAKSLQANCPSVGGDTNLSPF---DVTTPNKFDNAYYINLRNKKGLLHSDQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN 316          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 45/148 (30.41%), Postives = 69/148 (46.62%), Query Frame = 1
Query:   76 FAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            FA   +    LVAL G+H++G   C      +Y + +  +N          CP A  +         D  TP   DN YY N+L  +GL+  D QL     T   V+  A +   F ++F+ A+  +   +PLTGT+G+IR+ C+  N
Sbjct:  177 FAKKRLSRTDLVALSGAHTIGLAQCKNFRAHIYNDTN--VNAAFATLRRANCPAAAGNGDG-NLAPLDTATPTAFDNAYYTNLLAQRGLLHSDQQLFNGGATDGLVRTYASTPRRFSRDFAAAMIRMGNISPLTGTQGQIRRACSRVN 321          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.553e-12
Identity = 52/163 (31.90%), Postives = 72/163 (44.17%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIGIDAPGLVALLGS-HSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP      S  ++ FAA G++   +V L+G  HSVG  HC     RL    D A+ P     +  KC     DP        D+ T   +DN  Y  I   +G++ +D  L  D+ T   V   A S   F K F+ A+  +     LTG  GEIR+ C + N
Sbjct:  155 LPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRLS---DRAMEPSLKSSLRRKCSSP-NDPTTFL----DQKTSFTVDNAIYGEIRRQRGILRIDQNLGLDRSTSGIVSGYASSNTLFRKRFAEALVKMGTIKVLTGRSGEIRRNCRVFN 309          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.947e-12
Identity = 47/163 (28.83%), Postives = 73/163 (44.79%), Query Frame = 1
Query:   34 LPDHNDSRSVVLERFAAIG-IDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMAKSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            LP  N SR+ +   F   G ++   +VAL G+H++G+  C     R+Y   D  +N  +   +   CP  +           D  T    DN YY N++  KGL+  D  L  +  T   V+  A +   F   F+ A+  +    P TGT+G+IR  C+  N
Sbjct:  154 LPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGG-DTNINAAYAASLRANCPQTVGSGDG-SLANLDTTTANTFDNAYYTNLMSQKGLLHSDQVLFNNDTTDNTVRNFASNPAAFSSSFTTAMIKMGNIAPKTGTQGQIRLSCSRVN 314          
BLAST of FC875664 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.767e-12
Identity = 47/160 (29.38%), Postives = 78/160 (48.75%), Query Frame = 1
Query:   58 SVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDSKGLMMVDHQLATDKRTRPYVKKMA-KSQDYFFKEFSRAITILSENNPLTGTKGEIRKVCNLAN 519
            + ++  F   G+D   LV L G+H++G +HC    +RL+      + DP+L+ ++  ++  +   +I D      V  D G+    D +YYR +L  +GL   D  L  +      VK+ A  S+  FF EFS ++  +      TG+ GEIR+ C   N
Sbjct:  169 TTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIAD--NTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
The following BLAST results are available for this feature:
BLAST of FC875664 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
PER43_ARATH9.175e-1328.98Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER66_MAIZE1.198e-1228.48Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER2_CUCSA1.198e-1229.70Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER24_ARATH1.198e-1229.44Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER67_ARATH1.565e-1227.78Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER1_ARAHY1.565e-1229.87Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER70_MAIZE2.669e-1230.41Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER44_ARATH4.553e-1231.90Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER1_HORVU5.947e-1228.83Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER39_ARATH7.767e-1229.38Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31401E01EF CTVClemen1 Citrus clementina cDNA clone C31401E01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875664 ID=FC875664; Name=FC875664; organism=Citrus clementina; type=EST; length=707bp
AGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAATGA
CAGCAGGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGGCATTGACGCCC
CTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCAGAACTCATTGT
GTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCTGCACTGAACCC
TGACCACGTTCCGCATATGCTCCATAAGTGTCCTGATGCAATCCCAGACC
CCAAGGCTGTTCAGTATGTGAGGAATGACCGTGGCACACCCATGGTGCTG
GACAACAACTACTATAGGAACATATTGGACAGCAAGGGCTTGATGATGGT
TGATCATCAGCTAGCCACCGACAAGAGGACAAGACCTTATGTTAAGAAGA
TGGCCAAGAGTCAAGACTACTTCTTCAAGGAATTTTCAAGAGCCATTACT
ATCCTTTCTGAGAACAACCCTCTCACCGGTACAAAGGGTGAGATCAGAAA
GGTTTGCAATCTTGCCAACAAGCTCCACGACAAGTCCTAGCTAGCTAACA
GCTGTATCTGCTGCAACAAGTTAATAGCTCCAAATTTTTCTTCCTTGTTT
CTTCTATGAGGAAGAAAAGAGTGTGAGATGAGCTCCCAATAGATGGTTTT
TCTAGATGGGTTTGTTTCCTGTAAGATGTTCGTGTTACTACTACTATGTC
CNTTAGA
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