FC875670

Overview
NameFC875670
Unique NameFC875670
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC875670_ssr90 microsatellite FC875670_ssr90:90..99. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig10291 contig Ccv1_Contig10291:1..763. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: IMPA1_DICDI (Inositol monophosphatase OS=Dictyostelium discoideum GN=impa1 PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.104e-25
Identity = 57/126 (45.24%), Postives = 84/126 (66.67%), Query Frame = 3
Query:  318 QNDSLVKFLDTAVDAAKRAGE-IIRNGFYQTKNVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPI 692
            +N +L ++L +AVD  K  G  I++N   ++K +E+KG +DLVT+TDKA E+ I   L  ++P  K +GEE+T   G     +EPTW++DP+DGTTNFVH FP  C+SI L+I K  +V  +Y P+
Sbjct:    2 ENITLDQYLQSAVDVVKEIGPMILKNYNSRSKQIEYKGAIDLVTDTDKAVEEHIIKTLTTKYPHTKILGEESTKD-GIYNWGNEPTWVIDPIDGTTNFVHRFPLFCVSIALSINKEIVVACLYAPV 126          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: INM1_YEAST (Inositol monophosphatase 1 OS=Saccharomyces cerevisiae GN=INM1 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 7.000e-25
Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 3
Query:  327 SLVKFLDTAVDAAKRAGEIIRNGFYQTKNVEHKG---QVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNP 689
            S+ KFL     A ++ G II++     K+ + K     VD+VT  DK  E LI+  +K Q+P  KFIGEE+    G T +TD+PT+I+DP+DGTTNFVH FPF C S+GLT+ K P+VGV+YNP
Sbjct:    7 SIEKFLCEL--ATEKVGPIIKSKSGTQKDYDLKTGSRSVDIVTAIDKQVEKLIWESVKTQYPTFKFIGEESYVK-GETVITDDPTFIIDPIDGTTNFVHDFPFSCTSLGLTVNKEPVVGVIYNP 127          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: IMPA1_RAT (Inositol monophosphatase 1 OS=Rattus norvegicus GN=Impa1 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 9.142e-25
Identity = 57/126 (45.24%), Postives = 80/126 (63.49%), Query Frame = 3
Query:  342 LDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIWMSFYWSR 716
            +D AV  A++AGE+IR       +V  K    DLVT TD+  E ++ + +K+++P H FIGEE+ A+   T  T++PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ +    Y  R
Sbjct:    9 MDYAVILARQAGEMIREALKNKMDVMIKSSPADLVTVTDQKVEKMLMSSIKEKYPYHSFIGEESVASGEKTVFTEQPTWIIDPIDGTTNFVHRFPFVAVSIGFVVNKEMEFGVVYSCVEDKMYTGR 134          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: IMPA1_XENLA (Inositol monophosphatase 1 OS=Xenopus laevis GN=impa1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.037e-24
Identity = 55/125 (44.00%), Postives = 80/125 (64.00%), Query Frame = 3
Query:  351 AVDAAKRAGEIIRNGFYQTKNVEHKGQV---DLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIWMSFYWSR 716
            AV  A++AG ++     +  ++  K  +   DLVT TD+  E++I + +K+++P+H FIGEE+ AA   + LTD PTWI+DP+DGTTNFVH FPFV +SIG  + K    GVVY+ +    Y  R
Sbjct:   13 AVSIARKAGSVVCAALKEDVSIMVKTSLAPADLVTATDQKVEEMIISSIKEKYPSHSFIGEESVAAGAGSTLTDNPTWIIDPIDGTTNFVHRFPFVAVSIGFAVHKQVEFGVVYSCVEDKMYTGR 137          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: IMPA1_MOUSE (Inositol monophosphatase 1 OS=Mus musculus GN=Impa1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.037e-24
Identity = 56/126 (44.44%), Postives = 78/126 (61.90%), Query Frame = 3
Query:  342 LDTAVDAAKRAGEIIRNGFYQTKNVEHKGQ-VDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIWMSFYWSR 716
            +D AV  A++AGE+IR       +V  K    DLVT TD+  E ++ + +K+++P H FIGEE+ AA   T  T+ PTW +DP+DGTTNFVH FPFV +SIG  + K    G+VY+ +    Y  R
Sbjct:    9 MDYAVILARQAGEMIREALKNEMDVMIKSSPADLVTVTDQKVEKMLMSSIKEKYPCHSFIGEESVAAGEKTVFTESPTWFIDPIDGTTNFVHRFPFVAVSIGFLVNKEMEFGIVYSCVEDKMYTGR 134          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: IMPA2_RAT (Inositol monophosphatase 2 OS=Rattus norvegicus GN=Impa2 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.926e-24
Identity = 56/115 (48.70%), Postives = 75/115 (65.22%), Query Frame = 3
Query:  345 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYN 686
            + AV  A RAG+IIR    + K+V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKHVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHH 137          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: IMPA2_MOUSE (Inositol monophosphatase 2 OS=Mus musculus GN=Impa2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24
Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 3
Query:  345 DTAVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYN 686
            + AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE TA+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+++
Sbjct:   23 EVAVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHRVEDLIVSELRKRFPSHRFIAEEATASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVHQELEFGVIHH 137          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: IMPA2_HUMAN (Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA2 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.739e-24
Identity = 56/113 (49.56%), Postives = 72/113 (63.72%), Query Frame = 3
Query:  351 AVDAAKRAGEIIRNGFYQTKNVEHK-GQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYN 686
            AV  A RAG+IIR    + K V  K    DLVTETD   EDLI + L+++FP+H+FI EE  A+     LT  PTWI+DP+DGT NFVH FP V +SIG  + +    GV+Y+
Sbjct:   23 AVQLALRAGQIIRKALTEEKRVSTKTSAADLVTETDHLVEDLIISELRERFPSHRFIAEEAAASGAKCVLTHSPTWIIDPIDGTCNFVHRFPTVAVSIGFAVRQELEFGVIYH 135          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: QUTG_EMENI (Protein qutG OS=Emericella nidulans GN=qutG PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.252e-22
Identity = 50/120 (41.67%), Postives = 75/120 (62.50%), Query Frame = 3
Query:  351 AVDAAKRAGEIIRNGFYQTKN----VEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATE--LTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPI 692
            A D A++AG+++        +     E +  VDLVT+TD+  E LI   ++ ++PAHKF+GEE+ A   + E  + ++PTW VDPLDGT NF H FP  C+SIG  +   P++GV+Y P+
Sbjct:   17 ATDLARKAGQLLLERVNDRNSEQVYAEKENAVDLVTQTDEDVESLIKTAIQTKYPAHKFLGEESYAKGQSREYLIDEQPTWCVDPLDGTVNFTHAFPMFCVSIGFIVNHYPVIGVIYAPM 136          
BLAST of FC875670 vs. ExPASy Swiss-Prot
Match: SUHB_AQUAE (Inositol-1-monophosphatase OS=Aquifex aeolicus GN=suhB PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.108e-21
Identity = 52/131 (39.69%), Postives = 77/131 (58.78%), Query Frame = 3
Query:  324 DSLVKFLDTAVDAAKRAGEIIRNGFYQTK--NVEHKGQVDLVTETDKACEDLIFNHLKQQFPAHKFIGEETTAACGATELTDEPTWIVDPLDGTTNFVHGFPFVCISIGLTIGKIPIVGVVYNPIWMSFYW 710
            ++L K+L+ A  AA   G++++  F + K  N+E KG+ D V+  DK  E+ I   + + FP H+ +GEE     GA     E  W +DPLDGT N+++GFP   +S+GL  G+ PIVG VY P +   YW
Sbjct:    2 ENLKKYLEVAKIAALAGGQVLKENFGKVKKENIEEKGEKDFVSYVDKTSEERIKEVILKFFPDHEVVGEEM----GAEGSGSEYRWFIDPLDGTKNYINGFPIFAVSVGLVKGEEPIVGAVYLPYFDKLYW 128          
The following BLAST results are available for this feature:
BLAST of FC875670 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
IMPA1_DICDI4.104e-2545.24Inositol monophosphatase OS=Dictyostelium discoide... [more]
INM1_YEAST7.000e-2549.19Inositol monophosphatase 1 OS=Saccharomyces cerevi... [more]
IMPA1_RAT9.142e-2545.24Inositol monophosphatase 1 OS=Rattus norvegicus GN... [more]
IMPA1_XENLA2.037e-2444.00Inositol monophosphatase 1 OS=Xenopus laevis GN=im... [more]
IMPA1_MOUSE2.037e-2444.44Inositol monophosphatase 1 OS=Mus musculus GN=Impa... [more]
IMPA2_RAT5.926e-2448.70Inositol monophosphatase 2 OS=Rattus norvegicus GN... [more]
IMPA2_MOUSE7.739e-2448.70Inositol monophosphatase 2 OS=Mus musculus GN=Impa... [more]
IMPA2_HUMAN7.739e-2449.56Inositol monophosphatase 2 OS=Homo sapiens GN=IMPA... [more]
QUTG_EMENI3.252e-2241.67Protein qutG OS=Emericella nidulans GN=qutG PE=3 S... [more]
SUHB_AQUAE2.108e-2139.69Inositol-1-monophosphatase OS=Aquifex aeolicus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31401E07EF CTVClemen1 Citrus clementina cDNA clone C31401E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875670 ID=FC875670; Name=FC875670; organism=Citrus clementina; type=EST; length=764bp
GGTTGTAATTACCTCGATGGGACTCGAGAGAACTCTTCAGTATTCTTCCA
AAGGGTAATTGCGTGACGTGATGAATCTTGTCTATTAAAACACACACACA
AACACCAAGTAAAATCGTGGTGTCGGATTAGATTGGTTTGATGGTTTCAT
TTTGCTACGTATACAAAAAAAAAATCAAATAAAAAGAAAATAGCTCAAAA
ACGAAGCACAACCTGTCATTACCACCATCATCACTCATCAGCTCGCTGTC
CCTTCTCTTCTCGTTCTTCTCTTTAACTTTTTAATCCCGTATAATAAAAA
ATTCTACCCATATGGCACAAAATGATTCGCTTGTAAAGTTCTTGGACACT
GCAGTTGATGCAGCTAAGAGGGCTGGCGAGATAATCCGTAATGGGTTCTA
TCAAACCAAAAATGTGGAGCATAAAGGCCAGGTGGATTTGGTCACAGAAA
CTGATAAAGCATGTGAGGATCTCATATTTAATCATCTCAAGCAGCAATTT
CCCGCGCATAAGTTCATTGGAGAAGAAACTACCGCTGCTTGTGGTGCCAC
AGAGTTGACTGATGAACCCACTTGGATTGTTGATCCTCTTGATGGAACAA
CTAACTTTGTGCATGGGTTTCCCTTTGTGTGTATCTCTATCGGTCTTACA
ATTGGAAAGATTCCTATTGTCGGGGTTGTCTACAATCCAATATGGATGAG
CTTTTACTGGAGTCGTGGACAAGTGCATTTTTATGGAAAACTATAAAGTA
TATCTCAACTGACT
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