FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_THELT (S-adenosylmethionine synthetase OS=Thermotoga lettingae (strain ATCC BAA-301 / DSM 14385 / TMO) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.040e-28
Identity = 64/103 (62.14%), Postives = 77/103 (74.76%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKY 309
            GDQG MFGYAT+ETPEFMPL  VLA QL  +L++VRK    P+LRPDGKTQVTVEY ++     P+R+ T+LIS QHD  VT +E+   L EHVIKP IPE+Y
Sbjct:  128 GDQGMMFGYATNETPEFMPLPIVLAHQLAMRLSKVRKEKIVPFLRPDGKTQVTVEYSDDG---KPMRIDTILISAQHDPNVTINELKEVLLEHVIKPTIPEQY 227          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOBM (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.040e-28
Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T
Sbjct:  126 GDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.040e-28
Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T
Sbjct:  126 GDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.040e-28
Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T
Sbjct:  126 GDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOBH (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.040e-28
Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T
Sbjct:  126 GDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOB1 (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.040e-28
Identity = 63/108 (58.33%), Postives = 81/108 (75.00%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   V  ++I  D+KEHVIK ++P + LDE T
Sbjct:  126 GDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEVYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_DEHSC (S-adenosylmethionine synthetase OS=Dehalococcoides sp. (strain CBDB1) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.358e-28
Identity = 62/111 (55.86%), Postives = 78/111 (70.27%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYA  ETPE+MPL   LA +L  +L EVRKNGT P+LRPDGK+QVTVEY+N        R+ +V+I  QHD  +T ++I AD+   VIKP+IP   LDEKT ++
Sbjct:  134 GDQGMMFGYACTETPEYMPLPISLAHRLSKRLAEVRKNGTLPYLRPDGKSQVTVEYHNGKAK----RISSVVIGAQHDPDITTEKIQADIIREVIKPIIPTNLLDEKTEYY 240          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.358e-28
Identity = 62/108 (57.41%), Postives = 81/108 (75.00%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+AT+ET E+MP+   +A +L  +L+EVRKNGT P+LRPDGKTQVTVEY  ENG   PVR+  ++ISTQH   +  ++I  D+KEHVIK ++P + LDE T
Sbjct:  126 GDQGMMFGFATNETKEYMPMPIEMAHKLSRRLSEVRKNGTLPYLRPDGKTQVTVEY--ENGK--PVRIDAIVISTQHGPEIYLEQIEKDIKEHVIKVIVPSELLDENT 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 1.358e-28
Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+AT+ET E MPL   L+ +L  +LTEVRKNGT  +LRPDGKTQVT+E Y+EN    PVRV T+++STQH   VT ++I ADLKEHVI+ V+P   +DE+T
Sbjct:  133 GDQGLMFGFATNETEELMPLPISLSHKLSRRLTEVRKNGTLGYLRPDGKTQVTIE-YDEND--TPVRVDTIVLSTQHAPEVTLEQIQADLKEHVIEAVVPSALIDEET 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.774e-28
Identity = 63/108 (58.33%), Postives = 79/108 (73.15%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+A +ET E MPL   LA +L  +L EVRK    P+LRPDGKTQVT+E Y+ENG   PVRV T++ISTQH   + +D+I  D+KEHVIKP++P + LDE T
Sbjct:  131 GDQGLMFGFACNETEELMPLPISLAHRLSRRLAEVRKTDVLPYLRPDGKTQVTIE-YDENGK--PVRVDTIVISTQHHPEIEHDQIERDMKEHVIKPIVPAELLDENT 235          
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_THELT1.040e-2862.14S-adenosylmethionine synthetase OS=Thermotoga lett... [more]
METK_CLOBM1.040e-2858.33S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBL1.040e-2858.33S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBK1.040e-2858.33S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBH1.040e-2858.33S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOB11.040e-2858.33S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_DEHSC1.358e-2855.86S-adenosylmethionine synthetase OS=Dehalococcoides... [more]
METK_CLOBJ1.358e-2857.41S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_BACSK1.358e-2860.19S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_GEOTN1.774e-2858.33S-adenosylmethionine synthetase OS=Geobacillus the... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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