FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOTH (S-adenosylmethionine synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.774e-28
Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+A DETPE MP+   LA +L  +L++VRKNGT  +LRPDGK+QVTVEY  +     PVRV TVLISTQH   V  D I  D+ EHVIKPVIP + LD KT
Sbjct:  129 GDQGMMFGFACDETPELMPMPISLAHKLAMRLSQVRKNGTLNYLRPDGKSQVTVEYDGDK----PVRVDTVLISTQHGPEVDYDTIKRDVIEHVIKPVIPAELLDSKT 232          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CLOCE (S-adenosylmethionine synthetase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.774e-28
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+A DETPE MP+  +LA +L  KL+EVRKNG   +LRPDGK+QVTVEY  +     PVRV TV+ISTQH   V++D I  D+ EHVI PVIP + LDE T
Sbjct:  129 GDQGMMFGFACDETPELMPMPIILAHKLTMKLSEVRKNGKVKYLRPDGKSQVTVEYDGDK----PVRVDTVVISTQHGADVSHDTIEKDIMEHVIIPVIPRELLDEGT 232          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACP2 (S-adenosylmethionine synthetase OS=Bacillus pumilus (strain SAFR-032) GN=metK PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.774e-28
Identity = 64/108 (59.26%), Postives = 81/108 (75.00%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVEY ++N    PVR+ TV+ISTQH   VT ++I +DLKEHVI PV+P + +DE+T
Sbjct:  131 GDQGLMFGFANNETEELMPLPISLAHKLSLRLTEVRKDQTLAYLRPDGKTQVTVEYDDQN---KPVRIDTVVISTQHAPEVTLEQIQSDLKEHVISPVVPSELIDEQT 235          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACHK (S-adenosylmethionine synthetase OS=Bacillus thuringiensis subsp. konkukian GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.316e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACCZ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ZK / E33L) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.316e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACCQ (S-adenosylmethionine synthetase OS=Bacillus cereus (strain Q1) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.316e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACC7 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain AH187) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.316e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACC3 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain 03BB102) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.316e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACC0 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain AH820) GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.316e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACAN (S-adenosylmethionine synthetase OS=Bacillus anthracis GN=metK PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.316e-28
Identity = 68/110 (61.82%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRKN T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKF 237          
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_CLOTH1.774e-2861.11S-adenosylmethionine synthetase OS=Clostridium the... [more]
METK_CLOCE1.774e-2860.19S-adenosylmethionine synthetase OS=Clostridium cel... [more]
METK_BACP21.774e-2859.26S-adenosylmethionine synthetase OS=Bacillus pumilu... [more]
METK_BACHK2.316e-2861.82S-adenosylmethionine synthetase OS=Bacillus thurin... [more]
METK_BACCZ2.316e-2861.82S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACCQ2.316e-2861.82S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC72.316e-2861.82S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC32.316e-2861.82S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC02.316e-2861.82S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACAN2.316e-2861.82S-adenosylmethionine synthetase OS=Bacillus anthra... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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