FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STRT2 (S-adenosylmethionine synthetase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=metK PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 6.739e-28
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A DETPEFMPL   L+ +L  KL ++RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TND+I  D+ E VIK VIP +YLDE T F
Sbjct:  129 GDQGLMFGFAIDETPEFMPLPVSLSHKLVKKLADLRKSGEISYLRPDAKSQVTVE-YDENDQ--PVRVDTVVISTQHDPEATNDQIRQDVIEKVIKAVIPAEYLDEDTKF 235          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BIFLI (S-adenosylmethionine synthetase OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=metK PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.739e-28
Identity = 64/101 (63.37%), Postives = 75/101 (74.26%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 303
            GDQG MFGYATDETP  MPL   LA +L  +LTEVRK+G  P LRPDGKTQVT+EY + +    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ E
Sbjct:  132 GDQGVMFGYATDETPTLMPLPIYLAHRLAFRLTEVRKSGEVPHLRPDGKTQVTIEYDDND---KPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDE 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STRT1 (S-adenosylmethionine synthetase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=metK PE=3 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 67/110 (60.91%), Postives = 80/110 (72.73%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A DETPEFMPL   L+ +L  KL ++RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TND+I  D+ E VIK VIP +YLDE T F
Sbjct:  129 GDQGLMFGFAIDETPEFMPLPVSLSHKLVKKLADLRKSGEISYLRPDAKSQVTVE-YDENDQ--PVRVDTVVISTQHDPEATNDQIRHDVIEKVIKAVIPAEYLDEDTKF 235          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_GEOSW (S-adenosylmethionine synthetase OS=Geobacillus sp. (strain WCH70) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+A +ET E MPL   LA +L  +L+EVRK    P+LRPDGKTQVTVE Y+ENG   PVR+ T+++S QH   +T ++I  D+KEHVIKP++P + +DE T
Sbjct:  131 GDQGLMFGFACNETKELMPLPISLAHRLARRLSEVRKEAILPYLRPDGKTQVTVE-YDENGK--PVRIDTIVVSAQHHPEITQEQIERDIKEHVIKPIVPAELIDENT 235          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_DROME (S-adenosylmethionine synthetase OS=Drosophila melanogaster GN=M(2)21AB PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYATDET E MPL+ VLA +L  K+ E+R++    W RPD KTQVT EY    G+ VP RVHT+++S QH E ++ + + +++ E V+K VIP KY+D  TI H
Sbjct:  144 GDQGIMFGYATDETEECMPLTVVLAHKLNEKIAELRRSDVFWWARPDSKTQVTCEYLFNQGSAVPKRVHTIVVSMQHSEKISLETLRSEVMEKVVKVVIPAKYIDANTIVH 254          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 61/108 (56.48%), Postives = 77/108 (71.30%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFG+A DETP  MP+   LA +L  +L  VRK G  P+LRPDGKTQVTVEY ++     P+RV T+++STQH   VT+ +I AD+ EHVIKP+IPE  LD+ T
Sbjct:  128 GDQGMMFGFACDETPVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNT 231          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BIFLO (S-adenosylmethionine synthetase OS=Bifidobacterium longum GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 64/101 (63.37%), Postives = 75/101 (74.26%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPE 303
            GDQG MFGYATDETP  MPL   LA +L   LTEVRK+G  P LRPDGKTQVT+EY +++    PVR+ TVLISTQHD  VT D +A +LK+HVI PV+ E
Sbjct:  132 GDQGVMFGYATDETPTLMPLPIYLAHRLAFHLTEVRKSGEVPHLRPDGKTQVTIEYDDDD---KPVRLDTVLISTQHDPEVTQDWLAVELKKHVIDPVLDE 229          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACWK (S-adenosylmethionine synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACCR (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKF 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 8.802e-28
Identity = 67/110 (60.91%), Postives = 81/110 (73.64%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A +ET E MPL   LA +L  +LTEVRK+ T  +LRPDGKTQVTVE Y+ENG   PVRV T++ISTQH   VT +EI  DLKEHVIK V+P + +D +T F
Sbjct:  131 GDQGLMFGFACNETQELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVE-YDENGK--PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKF 237          
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRT26.739e-2860.91S-adenosylmethionine synthetase OS=Streptococcus t... [more]
METK_BIFLI6.739e-2863.37S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_STRT18.802e-2860.91S-adenosylmethionine synthetase OS=Streptococcus t... [more]
METK_GEOSW8.802e-2855.56S-adenosylmethionine synthetase OS=Geobacillus sp.... [more]
METK_DROME8.802e-2852.25S-adenosylmethionine synthetase OS=Drosophila mela... [more]
METK_CALS88.802e-2856.48S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK_BIFLO8.802e-2863.37S-adenosylmethionine synthetase OS=Bifidobacterium... [more]
METK_BACWK8.802e-2860.91S-adenosylmethionine synthetase OS=Bacillus weihen... [more]
METK_BACCR8.802e-2860.91S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC48.802e-2860.91S-adenosylmethionine synthetase OS=Bacillus cereus... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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