FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STAAS (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain MSSA476) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.501e-27
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:  130 GDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STAAE (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain Newman) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.501e-27
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:  130 GDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STAAC (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain COL) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.501e-27
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:  130 GDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STAAB (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=metK PE=3 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.501e-27
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:  130 GDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STAA8 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain NCTC 8325) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.501e-27
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:  130 GDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STAA3 (S-adenosylmethionine synthetase OS=Staphylococcus aureus (strain USA300) GN=metK PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.501e-27
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEY-YNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYAT+ET  +MPL+  L+ QL  +L++VRK+GT  +LRPDGK QVTVEY  N+N    PVR+ T+++STQH E VT ++I  D+K HVI P +PE  ++E+T F+
Sbjct:  130 GDQGLMFGYATNETETYMPLAIYLSHQLAKRLSDVRKDGTLNYLRPDGKVQVTVEYDENDN----PVRIDTIVVSTQHAEDVTLEQIQEDIKAHVIYPTVPENLINEQTKFY 237          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STRSV (S-adenosylmethionine synthetase OS=Streptococcus sanguinis (strain SK36) GN=metK PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.961e-27
Identity = 66/110 (60.00%), Postives = 80/110 (72.73%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A DETPE MPL   L+ +L  +L E+RK+G   +LRPD K+QVTVE Y+EN    PVRV TV+ISTQHD   TN+EI  D+ E VIK VIP +YLD+KT F
Sbjct:  129 GDQGLMFGFAVDETPELMPLPISLSHKLVRRLAELRKSGEIAYLRPDAKSQVTVE-YDENDQ--PVRVDTVVISTQHDPDATNEEIHRDVIEKVIKAVIPAQYLDDKTKF 235          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STRA5 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype V GN=metK PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.961e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A DETPE MPL   LA QL  KLT++RK+G   +LRPD K+QVTVE Y+EN    P+RV  V+ISTQHD  VTND++  D+ E VI  VIP  YLD++T F
Sbjct:  129 GDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVE-YDENDQ--PIRVDAVVISTQHDPNVTNDQLHKDVIEKVINEVIPSHYLDDQTKF 235          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_STRA1 (S-adenosylmethionine synthetase OS=Streptococcus agalactiae serotype Ia GN=metK PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.961e-27
Identity = 65/110 (59.09%), Postives = 79/110 (71.82%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFG+A DETPE MPL   LA QL  KLT++RK+G   +LRPD K+QVTVE Y+EN    P+RV  V+ISTQHD  VTND++  D+ E VI  VIP  YLD++T F
Sbjct:  129 GDQGLMFGFAVDETPELMPLPISLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVE-YDENDQ--PIRVDAVVISTQHDPNVTNDQLHKDVIEKVINEVIPSHYLDDQTKF 235          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 120.939 bits (302), Expect = 1.961e-27
Identity = 55/108 (50.93%), Postives = 79/108 (73.15%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYATDETPE +PL+ +LA +L   + + R++G+ PWLRPD KTQVTVEY ++NG  VP R+ TV+IS QH + ++  ++   L++ +++ VIP+  LDE T
Sbjct:  122 GDQGIMFGYATDETPEGLPLTILLAHKLNMAMADARRDGSLPWLRPDTKTQVTVEYEDDNGRWVPKRIDTVVISAQHADEISTADLRTQLQKDIVEKVIPKDMLDENT 229          
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STAAS1.501e-2754.46S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAE1.501e-2754.46S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAC1.501e-2754.46S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAAB1.501e-2754.46S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA81.501e-2754.46S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STAA31.501e-2754.46S-adenosylmethionine synthetase OS=Staphylococcus ... [more]
METK_STRSV1.961e-2760.00S-adenosylmethionine synthetase OS=Streptococcus s... [more]
METK_STRA51.961e-2759.09S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK_STRA11.961e-2759.09S-adenosylmethionine synthetase OS=Streptococcus a... [more]
METK2_YEAST1.961e-2750.93S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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