FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 3.960e-20
Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH
Sbjct:  119 GDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.960e-20
Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH
Sbjct:  119 GDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.960e-20
Identity = 51/111 (45.95%), Postives = 68/111 (61.26%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYA+ ET   MP     A +L  +  E+R++G  PWLRPD K+QVT  Y  ENG   PVR+  V++STQHD  +T  ++   + E +IKP+IP +     T FH
Sbjct:  119 GDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAY--ENGK--PVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_SYNS3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9311) GN=metK PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.172e-20
Identity = 54/105 (51.43%), Postives = 65/105 (61.90%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKP 291
            GDQG MFGYA +ETPE MPL   LA +L  +L EVR NGT  +L PDGKTQV+V Y N+     PV + T+LISTQH        DE    + I+ DL  HV+ P
Sbjct:  125 GDQGIMFGYACNETPELMPLPISLAHRLARRLAEVRHNGTLDYLLPDGKTQVSVVYENDK----PVEIDTILISTQHTAEVTGLTDEQEVRNRISEDLWTHVVLP 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_HAEIN (S-adenosylmethionine synthetase OS=Haemophilus influenzae GN=metK PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.172e-20
Identity = 50/110 (45.45%), Postives = 71/110 (64.55%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG MFGYAT+ET   MP +   A +L  K +EVRK+G   WLRPD K+QVT++Y +       V V  V++STQH E V+  ++   + E +IKPV+P ++L ++T F
Sbjct:  118 GDQGIMFGYATNETDVLMPAAITYAHRLMEKQSEVRKSGKLAWLRPDAKSQVTLKYEDNK----IVGVDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKF 223          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRASN (S-adenosylmethionine synthetase OS=Frankia sp. (strain EAN1pec) GN=metK PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.172e-20
Identity = 52/98 (53.06%), Postives = 70/98 (71.43%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDE-IAADLKEHVIKP 291
            GDQG MFG+A DETPE MPL   LA +L  +L+ VRK+G   +LRPDGKTQVT+EY  E+G   PVR+ TV++S+QH   +  D  +A D+ E+V++P
Sbjct:  129 GDQGLMFGFACDETPELMPLPIALAHRLARRLSAVRKDGQVGYLRPDGKTQVTIEY--EDGK--PVRLDTVVVSSQHAADIDLDTLLAPDVAEYVVEP 222          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_COLP3 (S-adenosylmethionine synthetase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=metK PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.172e-20
Identity = 47/111 (42.34%), Postives = 69/111 (62.16%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYAT+ETP  MP     + +L  +  E RK+G  PWLRPD K+QVT  Y +      PV + TV++STQH+  +  +++ + + E++I  V+P + L E T +H
Sbjct:  118 GDQGLMFGYATNETPTLMPAPLYYSHRLVERQAEARKSGVLPWLRPDAKSQVTFIYEDNK----PVAIDTVVLSTQHNPDIKQEDLVSAVMENIINHVLPAELLTEDTKYH 224          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_WIGBR (S-adenosylmethionine synthetase OS=Wigglesworthia glossinidia brevipalpis GN=metK PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.755e-20
Identity = 46/108 (42.59%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG +FGYAT+ET  FMP     A +L  + +EVRK    PWLRPD K+Q+T  Y N+      V + TV+IS+QH E +   ++   + E +I+P++P+K++  KT
Sbjct:  118 GDQGIIFGYATNETETFMPAPITYANKLMIRQSEVRKKNILPWLRPDAKSQITFIYENKK----IVGIDTVIISSQHSEEINLSDLREGIMEEIIQPILPKKWISNKT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_VIBCH (S-adenosylmethionine synthetase OS=Vibrio cholerae GN=metK PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.755e-20
Identity = 48/108 (44.44%), Postives = 71/108 (65.74%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +   VRKNGT PWLRPD K+QVT +Y  + G +  V +  V++STQH ++++  ++   + E +IKPV+P ++L ++T
Sbjct:  119 GDQGIMFGYATNETEVLMPAPITYAHRLMQRQAAVRKNGTLPWLRPDAKSQVTFQY--DQGKI--VGIDAVVLSTQHSDSISTADLREAVMEEIIKPVLPAEWLSKET 222          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_SYNSC (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9605) GN=metK PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.755e-20
Identity = 54/105 (51.43%), Postives = 65/105 (61.90%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKP 291
            GDQG MFGYA +ETPE MPL   LA +L  +L EVR NGT  +L PDGKTQV+V Y N+     PV + T+LISTQH        DE    + I  DL  HV++P
Sbjct:  125 GDQGIMFGYACNETPELMPLPISLAHRLSRRLAEVRHNGTLGYLLPDGKTQVSVVYENDK----PVSIDTILISTQHTAEVDGISDEQGIRERITEDLWTHVVEP 225          
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ACIBT3.960e-2045.95S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS3.960e-2045.95S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC3.960e-2045.95S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_SYNS35.172e-2051.43S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_HAEIN5.172e-2045.45S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_FRASN5.172e-2053.06S-adenosylmethionine synthetase OS=Frankia sp. (st... [more]
METK_COLP35.172e-2042.34S-adenosylmethionine synthetase OS=Colwellia psych... [more]
METK_WIGBR6.755e-2042.59S-adenosylmethionine synthetase OS=Wigglesworthia ... [more]
METK_VIBCH6.755e-2044.44S-adenosylmethionine synthetase OS=Vibrio cholerae... [more]
METK_SYNSC6.755e-2051.43S-adenosylmethionine synthetase OS=Synechococcus s... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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