FC875673
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_THICR (S-adenosylmethionine synthetase OS=Thiomicrospira crunogena (strain XCL-2) GN=metK PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.152e-19 Identity = 52/111 (46.85%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333 GDQG MFGYA++ET MP A +L K E+RK G WLRPD K+QVT+ Y E+G PV V V++STQH V N ++ + E +IKPV+PE +L T +H Sbjct: 118 GDQGLMFGYASNETDVLMPAPIYFAHRLMEKQAELRKAGKLDWLRPDAKSQVTLRY--EDGQ--PVAVDAVVLSTQHSPEVDNKDLHEAVMEEIIKPVLPEGWLHSGTQYH 224
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_EDWI9 (S-adenosylmethionine synthetase OS=Edwardsiella ictaluri (strain 93-146) GN=metK PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.152e-19 Identity = 48/108 (44.44%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324 GDQG MFGYAT+ET MP A +L + VRKNGT PWLRPD K+QVT +Y ++G + + V++STQH +T++ ++ + E +IKPV+P ++L T Sbjct: 118 GDQGIMFGYATNETDVLMPAPITYAHRLMERQARVRKNGTLPWLRPDAKSQVTFQY--DDGKI--AGIDAVVLSTQHADTISQKDLQEAVMEEIIKPVLPAEWLSAST 221
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CHRSD (S-adenosylmethionine synthetase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=metK PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.152e-19 Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333 GDQG MFGYAT+ET +MP + +L + E+RK+G PWLRPD K+Q+T Y + P V V++STQHD + DE+ +K +I+ VIP ++L E T +H Sbjct: 119 GDQGLMFGYATNETDSYMPAPIHYSHRLVERQAELRKHGLLPWLRPDAKSQLTFRY---DAQGKPCAVDAVVLSTQHDPDIDQDELREMVKREIIEEVIPAEWLTETTKYH 226
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_AMOPS (S-adenosylmethionine synthetase OS=Amoeba proteus symbiotic bacterium GN=metK PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.152e-19 Identity = 47/111 (42.34%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333 GDQG MFGYA+ ET MP + +L A+ E+RKN PWLRPDGK Q+T++Y + G PV + T++ STQH +++ ++ ++E +IKPV+PE++L T ++ Sbjct: 118 GDQGLMFGYASRETDVCMPAPIAYSHRLMARQAELRKNNKLPWLRPDGKCQLTLKY--DQGK--PVAIDTIVFSTQHAPEISHKDLVEAVREEIIKPVLPEEWLSAATRYY 224
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_VIBPA (S-adenosylmethionine synthetase OS=Vibrio parahaemolyticus GN=metK PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19 Identity = 48/110 (43.64%), Postives = 71/110 (64.55%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330 GDQG MFGYA +ET MP + +L K EVRKNGT PWLRPD K+QVT +Y + G + V + V++STQH ++++ ++ + E +IKPV+P +++ + T F Sbjct: 118 GDQGIMFGYACNETEVLMPAPITYSHRLVEKQAEVRKNGTLPWLRPDAKSQVTFQY--DQGKI--VGIDAVVLSTQHCDSISTPDLREAVMEEIIKPVLPAEWISKDTNF 223
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_SYNPX (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain WH8102) GN=metK PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19 Identity = 53/105 (50.48%), Postives = 65/105 (61.90%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQH--------DETVTNDEIAADLKEHVIKP 291 GDQG MFGYA +ETPE MPL LA +L +L EVR NG+ +L PDGKTQV+V Y N+ PV + T+LISTQH DE + I DL HV++P Sbjct: 125 GDQGIMFGYACNETPELMPLPISLAHRLAKRLAEVRHNGSLEYLLPDGKTQVSVVYENDK----PVAIDTILISTQHTAEVAGISDEQGIRERITEDLWTHVVEP 225
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_SHEDO (S-adenosylmethionine synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=metK PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19 Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324 GDQG MFGYA +ET MP A L + +EVRK+GT PWLRPD K+QVT Y E+G + V + +++STQH E VT ++ + E +IKPV+P ++L++ T Sbjct: 118 GDQGLMFGYANNETDVLMPAPITYAHALVKRQSEVRKDGTLPWLRPDAKSQVTFAY--EDGKI--VGIDAIVLSTQHREDVTQADLIEGVMETIIKPVLPAQWLNKDT 221
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19 Identity = 49/100 (49.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIP 300 GDQG MFGYA +TPE MPL L+ ++ ++TE R N WLRPD K+QVTVEY PVR+ V++S QH V++DEI + E+V+KP IP Sbjct: 124 GDQGLMFGYACKDTPELMPLPIALSHRIINRITEARFNKEVDWLRPDNKSQVTVEYDGNR----PVRIEAVVVSAQHGPDVSHDEIEKFVIENVVKPSIP 219
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_RALEJ (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain JMP134) GN=metK PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19 Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDE 318 GDQG MFGYA DETPE MP + +L + +++R++G PWLRPD K+QVTV Y + P V TV++STQH +T +I + E +IKPV+P + L + Sbjct: 121 GDQGLMFGYACDETPELMPFPIYYSHRLVERQSQLRRDGRLPWLRPDAKSQVTVRYVDGR----PHSVDTVVLSTQHAPDITQAQIREAVIEEIIKPVLPPEMLKD 222
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_PELPB (S-adenosylmethionine synthetase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=metK PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.505e-19 Identity = 58/119 (48.74%), Postives = 69/119 (57.98%), Query Frame = 1 Query: 1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNG-TCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHD-------ETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333 GDQG MFGYA ETP MP + A L KL E+RK G +LRPD K+QVT+EY NE V RV V++STQHD E + I D+ E+VIK VIP +DE T FH Sbjct: 125 GDQGMMFGYACTETPVLMPAAIQFAQHLMKKLAEIRKEGKIMTYLRPDAKSQVTLEYENE----VVKRVDAVVVSTQHDPEPEGVSEAAWQEVIKNDIIENVIKVVIPADLIDENTKFH 239 The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bpback to top |