FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_YERPP (S-adenosylmethionine synthetase OS=Yersinia pestis (strain Pestoides F) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +   ++   + E +IKPV+P +++   T
Sbjct:  118 GDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_YERPN (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +   ++   + E +IKPV+P +++   T
Sbjct:  118 GDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_YERPG (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +   ++   + E +IKPV+P +++   T
Sbjct:  118 GDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_YERPE (S-adenosylmethionine synthetase OS=Yersinia pestis GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +   ++   + E +IKPV+P +++   T
Sbjct:  118 GDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_YERPB (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +   ++   + E +IKPV+P +++   T
Sbjct:  118 GDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_YERPA (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +   ++   + E +IKPV+P +++   T
Sbjct:  118 GDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_YERP3 (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     A +L  +  EVRKNG  PWLRPD K+QVT +Y  ++G +  V +  V++STQH E +   ++   + E +IKPV+P +++   T
Sbjct:  118 GDQGLMFGYATNETSVLMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKI--VGIDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_SHEFN (S-adenosylmethionine synthetase OS=Shewanella frigidimarina (strain NCIMB 400) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 72/108 (66.67%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYA++ET   MP     A +L  + +EVRK+GT PWLRPD K+QVT  Y  ++G +  + +  +++STQH E VT  ++   + E +IKPV+P ++L++ T
Sbjct:  118 GDQGLMFGYASNETDVLMPAPITYAHKLVKRQSEVRKDGTLPWLRPDAKSQVTFAY--DDGKI--IGIDAIVLSTQHREDVTQADLIEAVMETIIKPVLPAQWLNKDT 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_HAMD5 (S-adenosylmethionine synthetase OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 48/108 (44.44%), Postives = 68/108 (62.96%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKT 324
            GDQG MFGYAT+ET   MP     + +L  + +E+RK G  PWLRPD K+Q+T +Y  + G    V + T++ STQH+E VT  ++   + E +IKPVIP ++L   T
Sbjct:  118 GDQGMMFGYATNETDVLMPAPITYSHRLVKRQSEMRKIGQLPWLRPDAKSQITFKY--DKG--YAVAIDTIVFSTQHEEDVTQKQLEEAVMEEIIKPVIPTQWLSSST 221          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRATW (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_YERPP2.567e-1944.44S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPN2.567e-1944.44S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPG2.567e-1944.44S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPE2.567e-1944.44S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPB2.567e-1944.44S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPA2.567e-1944.44S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERP32.567e-1944.44S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_SHEFN2.567e-1944.44S-adenosylmethionine synthetase OS=Shewanella frig... [more]
METK_HAMD52.567e-1944.44S-adenosylmethionine synthetase OS=Hamiltonella de... [more]
METK_FRATW2.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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