FC875673

Overview
NameFC875673
Unique NameFC875673
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length335
Libraries
Library NameType
CTVClemen1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRATT (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRATO (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRATN (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. novicida (strain U112) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRATM (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRATH (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRATF (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_FRAT1 (S-adenosylmethionine synthetase OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 46/111 (41.44%), Postives = 70/111 (63.06%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFG+AT+ETP  MP +   +  L  K  E+RK+G   WLRPD K QVT+ Y N+     P  + T+++STQH+E+++  E+   + E ++K VIP + + + T +H
Sbjct:  119 GDQGLMFGFATNETPTLMPSAIYYSHLLMRKQAELRKSGKLAWLRPDAKAQVTLAYENDK----PKFIDTIVLSTQHNESISQKELHDAVIEEIVKKVIPNELITKDTKYH 225          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CHLPD (S-adenosylmethionine synthetase OS=Chlorobium phaeobacteroides (strain DSM 266) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 60/119 (50.42%), Postives = 71/119 (59.66%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNG-TCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHD---ETVTNDE----IAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYA  ETPE MP +   A QL  KL E+RK G    +LRPD K+QVT+EY +E       RV  V++STQHD   E V+  E    I  D+ E+VI  VIP   LDEKT  H
Sbjct:  125 GDQGMMFGYACTETPELMPAALQFAQQLVKKLAEIRKEGKIMTYLRPDAKSQVTLEYVDEQ----VKRVDAVVVSTQHDPEPEGVSEAEWQAVIKKDIIENVINVVIPAALLDEKTKLH 239          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_CHLCH (S-adenosylmethionine synthetase OS=Chlorobium chlorochromatii (strain CaD3) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 56/119 (47.06%), Postives = 70/119 (58.82%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNG-TCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHD-------ETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFH 333
            GDQG MFGYA  ETPE MP +   A QL  KL E+RK G    +LRPD K+QVT+EY N+    +  RV  ++ISTQHD       E    + I  D+ E+VIK +IP   +DE T  H
Sbjct:  125 GDQGMMFGYACTETPELMPAAIQFAQQLVKKLAEIRKEGKMMTYLRPDAKSQVTLEYEND----IAKRVDAIVISTQHDPEPAGISEAEWQEIIKKDVIENVIKVLIPANMIDENTKLH 239          
BLAST of FC875673 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.567e-19
Identity = 50/110 (45.45%), Postives = 69/110 (62.73%), Query Frame = 1
Query:    1 GDQGHMFGYATDETPEFMPLSHVLATQLGAKLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIF 330
            GDQG +FGYAT+ET   MP     A  L  K +E+RK     WLRPD K+QVT +Y  +NG +  + + TV+ STQH E++T D +   + E +IKPV+P K+L + T F
Sbjct:  118 GDQGIIFGYATNETEVLMPAPITYAHLLVKKQSELRKKNILHWLRPDAKSQVTFKY--KNGRI--IGIDTVVFSTQHKESITQDVLKEAVMEEIIKPVLPNKWLTKNTKF 223          
The following BLAST results are available for this feature:
BLAST of FC875673 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_FRATT2.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATO2.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATN2.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATM2.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATH2.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRATF2.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_FRAT12.567e-1941.44S-adenosylmethionine synthetase OS=Francisella tul... [more]
METK_CHLPD2.567e-1950.42S-adenosylmethionine synthetase OS=Chlorobium phae... [more]
METK_CHLCH2.567e-1947.06S-adenosylmethionine synthetase OS=Chlorobium chlo... [more]
METK_BUCAP2.567e-1945.45S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]

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Properties
Property NameValue
Genbank descriptionC31401E10EF CTVClemen1 Citrus clementina cDNA clone C31401E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC875673 ID=FC875673; Name=FC875673; organism=Citrus clementina; type=EST; length=335bp
GGTGATCAGGGGCATATGTTTGGTTATGCTACCGATGAGACTCCTGAATT
TATGCCTCTGAGTCATGTTCTTGCCACCCAGCTTGGTGCTAAACTTACCG
AGGTTCGAAAGAATGGCACTTGCCCTTGGTTGAGGCCTGATGGCAAGACA
CAAGTTACTGTTGAGTATTACAATGAGAATGGTGCTATGGTTCCTGTGAG
AGTTCACACAGTTTTGATCTCTACTCAGCATGACGAAACTGTGACTAATG
ATGAGATCGCTGCTGATTTGAAAGAGCATGTGATCAAGCCTGTTATTCCT
GAGAAGTACCTTGATGAGAAGACTATCTTCCATCT
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