FC875674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB5C_BOVIN (Ras-related protein Rab-5C OS=Bos taurus GN=RAB5C PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 56/161 (34.78%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDV-KNRQVKAKQVTFHRKKN-LQYYEISAKSNYNFEKPFLYLARKL 583 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T T+ W ++L R NI I L GNK D+ R V+ ++ + + N L + E SAK+ N + F+ +A+KL Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAKKL 182
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB5A_PIG (Ras-related protein Rab-5A OS=Sus scrofa GN=RAB5A PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N++ Q ++ +L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB5A_MOUSE (Ras-related protein Rab-5A OS=Mus musculus GN=Rab5a PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N++ Q ++ +L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB5A_MACFA (Ras-related protein Rab-5A OS=Macaca fascicularis GN=RAB5A PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N++ Q ++ +L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB5A_HUMAN (Ras-related protein Rab-5A OS=Homo sapiens GN=RAB5A PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N++ Q ++ +L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB5A_CANFA (Ras-related protein Rab-5A OS=Canis familiaris GN=RAB5A PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N++ Q ++ +L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB5A_BOVIN (Ras-related protein Rab-5A OS=Bos taurus GN=RAB5A PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 54/161 (33.54%), Postives = 88/161 (54.66%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCR-VCENIPIVLCGNKVDVKNRQVKAKQ--VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKL 583 FKLV++G+ GK++ V R + G+F + E TIG + ++F WDTAGQE++ L YY Q AI+++D+T ++ W ++L R NI I L GNK D+ N++ Q ++ +L + E SAK++ N + F+ +A+KL Sbjct: 21 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASPNIVIALSGNKADLANKRAVDFQEAQSYADDNSLLFMETSAKTSMNVNEIFMAIAKKL 181
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB43_HUMAN (Ras-related protein Rab-43 OS=Homo sapiens GN=RAB43 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 59/166 (35.54%), Postives = 91/166 (54.82%), Query Frame = 2 Query: 110 FKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNL-QYYEI------SAKSNYNFEKPFLYLARKL 583 FKLV+VGD GKT V+R TG F +R TIGV+ +++ WDTAGQE+F + YY AI+ +D+T R ++ +VP W D+ + NI +L GNK D+ + ++V+ ++L ++Y+I SAK + N E+ FL +A +L Sbjct: 19 FKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSDLS----ELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: RAB18_CHICK (Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19 Identity = 58/173 (33.53%), Postives = 88/173 (50.87%), Query Frame = 2 Query: 107 SFKLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIV--LCGNKVDVKNRQVKAKQ-VTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVES 616 + K++I+G+ G GK++ + R F+ TIGV+ + K + WDTAGQE+F L YY Q I+++DVT R T+ + W +L C IV L GNK+D +NR+V + + F RK ++ + E SAK+ + F L K+ P L ES Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVKMLVGNKIDKENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
BLAST of FC875674 vs. ExPASy Swiss-Prot
Match: YPT5_SCHPO (GTP-binding protein ypt5 OS=Schizosaccharomyces pombe GN=ypt5 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 5.084e-19 Identity = 57/172 (33.14%), Postives = 94/172 (54.65%), Query Frame = 2 Query: 113 KLVIVGDGGTGKTTFVKRHLTGEFEKRYEPTIGV----EVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVC-ENIPIVLCGNKVDVKNRQ---VKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLH 604 KLV++GD GK++ V R + +F+ E TIG + P+D T+ ++ WDTAGQE++ L YY + CAI+++D+T + + +W ++L R E I I L GNK+D+ + KA + + NL ++E SAK+ N + F +A+KL + L+ Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS---VKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLN 184 The following BLAST results are available for this feature:
BLAST of FC875674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC875674 ID=FC875674; Name=FC875674; organism=Citrus clementina; type=EST; length=716bpback to top |